KEGG   Oryzias melastigma (Indian medaka): 112151505
Entry
112151505         CDS       T07439                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
  KO
K12842  U2-associated protein SR140
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112151505
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oml03041]
    112151505
Spliceosome [BR:oml03041]
 Complex A
  U2 snRNP components
   U2 related factors
    112151505
 Complex B
    112151505
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 SET_assoc RRM_7 RRM_5 DUF2408
Other DBs
NCBI-GeneID: 112151505
NCBI-ProteinID: XP_024136239
LinkDB
Position
LG20:complement(7880733..7890765)
AA seq 981 aa
MIDFILVPQKMADRTPGSQKASAKALLESKLKSFSIGKMAVAKRTLSKKEQDELKKKEDE
RAAAEIYEEFLAAFEGGGEGKVKAFVRGGIANATKEEAAADEKRGKLYKPKSRFEGQTKS
ILPLETPPQFLSFERKQTVKKNTEKEKKKSNLELFKEELKQIQEERDERHKLKGRVSRFE
PLPGMEGRRSSDGSSRRNRPSSVLDDCAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEF
GRYGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKHLNGKMIMNFEMKLGWGK
GVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNTPLLPPPKNKEEFEKTLSQ
AIVKVVIPTERNLLSLIHRMIEFVVREGPMFEAMIMNREINNPMYRFLFENQSPAHVYYR
WKLFSILQGESTAKWRTDDFRMFKNGSFWRPPPLNPYLHGPYDDADEEEEEEEGSKKGCL
KEDERDKLEEMLRGLTPKRGDIAEAMLFCLNHAEAAEEIVECIAESLSILKTPLPKKIAR
LYLVSDVLYNSSAKVSNASYYRKYFETKLCQIFSDLNATYKTIQGHLQSENFKQRVMSCF
RAWEDWAVYPDPYLIKLQNIFLGLVNLSADKEPPTLVVESEPAEDIDGAPIGEFVENTLL
EDVDGVPIDGAPIDGAPIDGAPLDDIDGIPIKPMEEDIDGIPFDQSKEATFKVAPSKWEA
VDEAELQAQAVTTSKWEIFEQPEETKKDEDSDDDRSPRSDDNQSYSNPMKDDGDMKAKSS
GMNEEKRTKLREIEVKVMKFQDELESGKRPKKPGQSIQEQVEHYRDKLLQKEKEKEKLER
EKEKEKKEKEKAEARLKELKKEKEKDDTPTRKDRKRHHSGSPSPTRSSSRRGRSSSPRSE
RSERSERSDRSYSKDTSSRSSHKDSPRSSNKKSSKRSPSSPRTPKRTRRSRSRTPKKSTK
KSRSRSRSPHRSHKKSKKSKH
NT seq 2946 nt   +upstreamnt  +downstreamnt
atgatcgattttattttagttccacaaaagatggcggaccgaacgcctggctctcaaaaa
gctagcgcgaaggcgctgcttgagagcaaactgaaatcttttagcattggcaagatggca
gtagcaaaaaggaccttaagcaaaaaggaacaggatgaactaaagaaaaaggaggacgag
cgagcagcagcagaaatttatgaggaatttctcgctgcgttcgaaggtggaggagagggt
aaagtgaaagcatttgtccgaggtgggattgcaaatgcaacaaaagaagaggcagctgct
gatgagaaaagaggaaaattatacaagccgaagtcccgttttgaaggccagacaaaaagc
atcttgcctttggagacccctcctcaatttttatcatttgaaagaaaacaaactgtgaag
aaaaatactgaaaaggaaaagaagaagagtaacttggagctcttcaaagaagaacttaaa
cagattcaagaggaaagggatgaaagacacaagttgaaaggccgtgtcagtcgttttgag
cccctccctggcatggagggaagacgttcatcggatggttcttcaagaagaaaccgtccg
tccagtgttttggatgactgtgcaccaggttcccacgacgtaggagacccgtccacaact
aacttatatctcggaaacatcaatccacagatgaacgaagaaatgttgtgtcaagagttt
ggtcgctacggccctctggccagcgtgaagatcatgtggccacggacagacgaggagaga
gctcgggagcgaaactgtggctttgtggcttttatgaacaggagggatgcagagcgagca
ctcaaacacctcaatggaaagatgatcatgaactttgagatgaaattaggatggggcaaa
ggtgttcccattccaccccatcccatctacatccctccctctatgatggagcacactcta
ccgccgcccccctccggcctccccttcaatgcacagccccgagagaggctaaagaatcca
aacactcccctgcttcctccgcccaaaaacaaggaggagttcgagaagactctgtcgcaa
gccatagtcaaagtggttatcccaacagaaaggaatttgctctctctcatccatcgcatg
atcgagtttgtggtgcgtgaaggacccatgtttgaagccatgatcatgaacagagaaatc
aacaatcccatgtacaggtttttatttgaaaatcagagtccagcacatgtatattacaga
tggaagctcttctcgatactacagggggaatcgacggccaaatggcgaacagatgacttt
aggatgtttaaaaatggctctttctggcgtccgcctcctctcaatccgtacctccatggc
ccttatgacgacgctgatgaggaggaggaagaagaagagggcagcaagaaaggctgtctg
aaagaagatgagcgggacaaactggaagaaatgcttcgtggtttgacccccaagagagga
gacatcgccgaggccatgctgttctgtctgaaccacgccgaagctgctgaggagattgtg
gagtgtatcgcggagtccctgtccatcctaaaaacccctctaccaaagaagattgcacgg
ttgtatttagtttccgatgtgctgtacaactcttcagccaaagtatccaacgcgtcttac
tacagaaaatattttgagacaaagctctgccagatcttctcagatctcaacgccacgtac
aaaactatccaaggccacctccagagtgagaactttaagcaacgcgtgatgtcatgtttc
cgggcgtgggaggattgggcggtctacccagacccctaccttatcaagctgcagaacatc
ttcctgggtctggttaacctctccgcagacaaggagcctccaactctcgttgtggagtct
gagccagcagaggacatcgacggcgctcccatcggggagttcgtagaaaacaccctcctg
gaggatgtggacggggtgcccatcgacggcgcacccatcgacggggcgcccatcgacgga
gcacctttggatgacattgacggcattccgatcaagcctatggaagaggacatagatgga
ataccattcgatcagtccaaggaggcaacgtttaaggtggcgccctccaaatgggaagct
gtggatgaagctgagctgcaggcacaagctgtgacgacatcaaaatgggagatttttgag
cagccagaagaaaccaaaaaggacgaggacagtgatgatgacaggagcccccgctcagac
gacaaccagagctactccaaccccatgaaggatgacggcgacatgaaagccaagtcatcg
ggaatgaacgaggagaaacgcaccaagctcagagagattgaggttaaagtgatgaaattc
caggacgagcttgaatctgggaaaagacccaaaaagcccggtcagagtattcaggagcag
gtggagcactacagggacaaactgctgcagaaggaaaaagaaaaggaaaagctagaacgg
gaaaaagagaaggagaagaaagaaaaggagaaagctgaggctcggttgaaggagctaaag
aaagaaaaagagaaagacgacacgccgacgaggaaagacagaaagaggcatcacagcggc
tctcccagcccaacaagaagcagcagcaggcgaggccgctcctcctcgccgcgttccgag
cgatccgagaggtccgaacgctcggacagatcctactcgaaagacacatcttcccgttcc
tcccacaaagactccccacgctccagcaacaagaaatcctccaaaaggtcgccttcatcc
cctcgcacgcccaaacgaacgaggaggtcacgctcaagaacacccaagaaatccaccaag
aagtcccgctccaggtcgaggtctccacaccggtcccacaaaaagtcaaagaagagcaaa
cactga

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