Oryzias melastigma (Indian medaka): 112151521
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Entry
112151521 CDS
T07439
Name
(RefSeq) cadherin-12
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112151521
Cell adhesion molecules [BR:
oml04515
]
Cadherins
Major cadherins
112151521
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_4
RET_CLD1
Fibulin_C
Stevor
DUF443
Motif
Other DBs
NCBI-GeneID:
112151521
NCBI-ProteinID:
XP_024136260
Ensembl:
ENSOMEG00000000002
UniProt:
A0A3B3B4T9
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All DBs
Position
LG20:complement(1097392..1249180)
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AA seq
804 aa
AA seq
DB search
MLTRNCLLLFLWILVNAGSVSSLRPPSSPLGRSRTGREHARSSAGSARNGAAGFQRVKRG
WVWNQFFVLEEYMGSDPQYVGKLHTDLDKGDSLVKYTLSGEGAGSIFTIDQTTGDIHALR
SLDREEKPYYTLRAQAVDIDTNAPLEPESEFVIKVQDINDNEPKFLEGPYVASVPEMSPV
GTYVTQVTATDADDPTYGNSARVVYSILHGQPYFSVDPKTGVIKTALPNMDREVKEEYQV
LIQAKDMGGQLGGLAGTTIVNITLSDVNDNPPRFSKSFFHLRVPESSAVGSAIGRIKAHD
LDIGRNAEVEYTIVPGDGGAMFDITTNEHNQEGIIILKRPLDYESKKAYTFKVEASNAHM
DPRFQSFGAFKDTATVKINVLDVDEPPVFNKPSYVMDVYEDTPAGTIIGAVTAQDLDASS
SPVRYSIDWRSDLDSYFDIDPVEGTISTNDLLDRENIAQHNVSVVATKLNSPVLTSRVAV
TVHVLDINEFPPELASPYETFVCENARLGQVIQTFGAKDKDVPSAGQQFSFRTPKEDMKN
KNFTIRDFGNNTAGIVTKRVGFRRRLQEIYFLPVVIEDNGYPPKSSTGTLTIRVCGCESD
GSVLSCSAEAIFLPVGLSTGALIAILLCIVILLGIVVLYVSLRRQKKKETLMSSKEDIRD
NVIHYDDEGGGEEDTHAFDMGTLRNPKVVKENLYRRDVKPEMKRSPKPPVSQDSADIRDF
IHQRLVEHDLDNSAPPYDSLATYAYEGEGSVAESLSSIESVTVDPEEDYDYLSDWGPRFK
TLAGIFGEQSETQSDSTNTENTHG
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgctaacaaggaactgcctgctgctgttcctgtggattctcgttaacgcgggttcggtt
tcttctttgcggccaccttcatctccattgggacggagccggacggggagggagcacgcc
aggagctcggcgggctctgcgaggaatggagcggcgggatttcagcgggtcaagaggggc
tgggtgtggaaccagttctttgtgctggaggagtacatggggtcagaccctcagtatgtg
ggcaagctccacactgacctcgataagggggacagtctggtaaagtacaccctctcaggg
gaaggggccggctccattttcacgattgaccaaacaacaggggacatccatgccttaagg
agtctggacagagaggagaagccttactacaccctgcgcgcccaggccgtggacattgac
accaacgccccgctggagccggagtctgaattcgtaatcaaggttcaagatatcaatgac
aacgagccaaagttcttggaagggccgtatgtagccagcgttcccgagatgtcaccagtc
ggaacgtatgtgacgcaggtgaccgccacggatgcagacgaccccacttatggaaacagt
gccagggtggtctacagcatcctccatggccagccgtacttctctgttgaccccaaaaca
ggggttataaagacagccctgcccaatatggacagagaggtgaaggaagaataccaggtt
ctaatccaggccaaggacatggggggccagctgggaggactggccgggaccacgatcgtg
aacatcaccctcagcgacgtcaacgataatccgccgcgcttttctaaaagtttctttcac
ctgagagttccagaatcttctgcagtgggctctgccattggccggatcaaagcacatgac
ctggacatcggaaggaacgcggaagtggagtatactatcgttcccggtgatggtggcgcc
atgtttgacatcaccaccaacgaacacaaccaggagggcatcatcattctcaaaaggcca
ctggactatgagagcaagaaggcgtacacctttaaggtcgaggcctccaacgcccacatg
gacccacgctttcagagctttggggccttcaaagacaccgccacagtcaagattaacgtt
ttggatgtggatgagcccccggtgttcaataagccctcctatgtgatggatgtgtacgag
gacacacccgcgggcaccatcatcggagcggtgacagcccaggatttagatgccagcagc
agcccggtcaggtactccatcgactggaggagcgacttggacagctactttgacatcgat
ccagtggagggcaccatttccaccaacgacctgctggaccgagagaacatcgcccagcac
aacgtctccgtcgtagcaaccaagctaaacagcccggttctgaccagccgggtggccgtc
accgtccacgtgctggacatcaacgagttcccgcccgaactggccagtccgtacgagacc
tttgtgtgtgaaaatgcccgactgggacaggttatccaaacgtttggtgctaaagacaaa
gacgtaccgagcgctggacagcagttctccttcagaacaccgaaagaggacatgaagaac
aagaacttcaccatccgggactttggaaataacacggctggaatcgtgaccaagcgcgtc
ggcttccgccggcgcttacaggagatctacttccttcctgtcgtgatcgaggacaacggc
taccccccgaagagcagcacgggcaccctgaccatccgggtgtgcggctgtgagtcggac
ggctctgtgctctcctgcagcgctgaggccattttcctccccgtgggtctgagcactgga
gctctgatcgccattctgctgtgtatcgtcatcttattgggtatcgtggttctctatgtg
agcttgaggcgacagaagaaaaaggaaaccctcatgtcatccaaagaggacattcgagat
aacgtgatccactatgatgatgaggggggaggagaggaggacacgcacgcctttgacatg
ggaacgcttcgcaaccccaaagttgtcaaagagaacttgtaccgccgggacgtcaagccg
gagatgaaacggagcccgaagccgcccgtctctcaggacagcgccgacatccgagacttc
atccaccagcggctggtggagcacgacttggacaactcggccccgccctacgactccttg
gcgacgtacgcttacgagggcgagggctccgtggcggagtcgctaagctccatcgagtct
gtcactgtagacccggaggaggactacgattacctcagcgactgggggccccgctttaag
acgctggccgggatctttggggaacagtcagaaacccagtcggactccacaaacacagaa
aacactcacggatga
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