Oryzias melastigma (Indian medaka): 112151547
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Entry
112151547 CDS
T07439
Name
(RefSeq) rho GTPase-activating protein 21
KO
K20315
Rho GTPase-activating protein 21/23
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112151547
Membrane trafficking [BR:
oml04131
]
Endosome - Golgi transport
Others
Others
112151547
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112151547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH_9
PH
PDZ_6
PDZ
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
112151547
NCBI-ProteinID:
XP_024136295
LinkDB
All DBs
Position
LG20:complement(2655177..2707087)
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AA seq
1861 aa
AA seq
DB search
MLAQRNGLPPGCKEAPLKDPSDLWDVDVSAEGCCSFSSSLSSGGCPWARLAGMDGCLSEP
YCLWFQLLARAYCGEVELGINSTNRNVSWARLREASRKSFFRSRAKQKDGREQSEASAAA
SPGAEEEPFSWPGPKTLRLRRTSQGFGFTLRHFIVYPPESAVHNSLKDDENGSRGRQRNR
LEPMDTIFVKQVKEGGPAHGAGLCTGDRIVKVNGESIIGKTYSQVIALIQNSDASLELCV
MPKDEDILQLFSRDITALAYSQDAYLKGNEAYSGNAQNIPEPPPICYPRIELKTAGPAQT
SEPGRRGMEIPVSASPLQAAARVCGENVRTDPVDRGSRLARAGPSHRTEENRFAVPADAP
AATASNADTLPPPARDAISPNRCSPSPSSPHQHIDWRNYTTYKDYIDAKRLHSYGCRTIQ
ERLDSLRAAADPAYSQQRTPPQRGALGSQVKRRSVSNDRGGDAACAGTAPLRSASQERLG
GGAEKANRNWPRSASQDVLPFSPAVRVLKPRARSCDYLSQPPADKVAVVEERQKALPHLR
QSLAVQEEEAQRGGTSSSPVATADPPEGTTDSAPSSRTEGLILRPSRLPVKTSDASPAKT
AGPLKDQRVTGNHLDYSPPLHLQLRSRADSLKLENRAESGLGARSSSCSGGSSKPLRPPH
IGVVTVSSRIPPTSRAQKPTSSSAQALFRTNHGSADGVEGPDATVVVLRKDRNFGSASPR
PPSYVFAVNDNKEEAAYKAPPLVKAGSADGAVCWMSADSCRDLHLRGLGENRHKSGSTNL
DNSLDSIPFIDEPSSPSLDLDSTHIPASVVICGTPAITTIPPSPTSSSPLIRRQLSHDQD
SFRLTIVESDSGSKTERSKSYDEGLDNYHDGRGRSLIPGLKGLRKAIDRSSEDSGSRGDS
SSDVFCDATKEGFLHFKQLHTDKGKRVGGGMRPWKQVYAVLRGHGLCLYKDRKEGQAHAS
CQTAEEPLQISIKACLIDISYSDTKRKNVLRLTTSDCEYLFQAEDREDMLAWIRVIQENS
HLDEESAVFSSHDLISRKIKEYNTLMSPTGSKSEPSPRTSRQSLSIRQTLLGGKGDGKTP
SPQSPKADVEKRSMLKDDTSPPKDKGTWRKGLPGLMRKPFEKKPSAGVTFGVRLDDCPPA
HTNKFVPLIVEVCCKLVEERGLEYTGIYRVPGNNAAISNMQEELNNKGVSDIDVQDDKWK
DLNVISSLLKSFFRKLPEPLFTNRRYADFIDANRIEDPVERLKVLKRLLHELPDHHYETL
KFLSAHLKTVAENSEKNKMEPRNLAIVFGPTLVRTTEDNMTHMVTHMPDQYRIVETLIQS
YDWFFTDDGNGDPVTVSREESAVESQPVPNIDHLLTNIGRTGASQGEVSDSPASDSAKSK
VSEGSGRDPVSRELLVSSIFAAASRKRKKSKEKAQPSSSDDDLDPAFAALRSSQAEAAPD
GGREAAELASKAKHRNSLFIKETPPTQPSPNVSRTARQGRSSLSDPPSQPDENTSDLGTM
SSGASVPRSRPKKWTAGGSPDLLVNLGASPRAEVSSITSDYSTTSSNTFLTGAESSVLSP
ELQPGEDADDERSELVSEGRPMETDSESDFPVFGTAQSTPHPEPDRKEQRGAAAAPKLEA
RRLFPSQRMIEGDTLSRRWSLRQKTDSDSSAEGAAGSEGRPEAATRLSRVLEVMKKGRSS
SSISSSSRSESDRAEPAWHLKITERLKLRLRSSADDMLAPRSRPAEARGKKRSIRRRHTM
GGQRDFAELAVIHDWREQGGGDGAADLSALDRLKPRCSSQDFSIRDWIARERCRGPEPSA
AVAPKALPEDDPAEAQGAAPAGEQVNGGAPQNKNKASAGTDPHPHKLSGAQVVRSRFYQY
L
NT seq
5586 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcccagaggaacgggctccctcctggctgtaaggaagctcccctcaaggacccc
tctgacttgtgggatgtggatgtcagcgctgaaggctgctgttccttctcctcctccctg
tcatccggaggttgtccctgggctcggctggccggtatggatggctgcttgtcagagccg
tactgcttgtggtttcagctcctagccagagcttactgcggtgaggtggagctggggatc
aacagcaccaaccgcaacgtgtcctgggctcgccttcgggaagcttctaggaaaagcttc
ttccgatctcgggccaaacagaaagatgggcgtgaacagagcgaggcgtcggccgccgcc
tctcccggggcggaggaagagcccttctcctggccggggcccaaaacgctccgtctgcgg
cgaacctcgcagggcttcggcttcactctgcgacacttcatcgtgtacccgcccgagtct
gccgtccacaactcactgaaggacgatgaaaatggaagtagagggagacagaggaaccgt
ctggagccaatggacaccatatttgtcaagcaagtgaaggagggaggccccgcccacgga
gctggactctgtacaggggaccggatcgtgaaggtgaacggagagagcatcatcgggaag
acgtactcacaggtcatagccttgatccagaacagcgatgcctcgctggagctctgtgtg
atgccaaaggatgaagacattttacagctgttttccagggatatcacggctctggcgtat
tcccaggatgcatacctcaaagggaatgaggcatacagcggaaatgcgcagaacatcccg
gagccccctcccatatgctaccctcggatagagctgaagaccgccggcccggcccagacg
tcggagccgggaaggcgagggatggaaatccccgtctctgcgtctcctctgcaggcggcg
gcgcgggtctgcggcgagaatgtcaggactgacccggtggaccgggggtcccggctggct
cgggccggtcccagccacaggacggaggagaaccggttcgccgttcccgcagacgctccg
gcggccaccgcctccaacgctgacaccttacccccacctgcgcgggacgccatctcgccc
aaccgctgctcgccgtcccccagctccccccaccagcacatcgactggaggaactacacc
acctacaaggactacatagacgccaagaggctgcactcgtacggctgccgcaccatccag
gagcggctggacagcctgagggcggcggccgaccccgcctactctcagcaacgcaccccc
cctcagaggggggctctgggctcccaggtcaaacggaggagcgtctctaacgatcgtggg
ggggacgccgcctgcgccggtactgccccactacgcagcgcctctcaggagaggctgggg
ggcggggctgagaaggccaacaggaactggcctcgcagcgcctcccaggacgtcctgccc
ttctcccccgcagtccgagtcctcaaacctcgagcgcggtcatgtgactacctgagccag
ccgcctgccgacaaggtggcggtggtggaggagaggcagaaagctttacctcacctgcgc
cagagtctcgccgtccaggaagaggaggcgcagaggggcgggacgtccagctcacctgta
gccactgcagatcctcctgaaggtaccacagactccgccccctcgtccaggacggagggt
ctcatattgaggccctctcgtctgcctgtcaaaacctcagacgcttctcccgccaaaact
gcaggcccccttaaagaccaaagagtgacggggaaccacctggactactccccccccctg
cacctgcagctgcggagcagagccgacagcctgaagctggagaaccgggccgagtcgggc
ctgggagcccggtcttcatcctgctccggtggatcctcaaaaccgctgaggccgcctcac
atcggagtcgtcactgtctcctcccggatcccccccaccagcagagcccaaaagcccacc
tctagctccgcccaggcacttttcaggactaaccacggctctgcagacggcgtggaagga
cccgacgccaccgtggtggtcctcaggaaggacaggaacttcggatccgcctccccgcgg
cctccgtcctacgtcttcgccgtcaacgacaacaaagaggaggcggcttacaaagccccc
ccgctggtgaaggcgggctctgcagacggcgccgtctgctggatgtctgcggacagctgc
agggacctgcacctccgaggtctgggagaaaaccggcacaaatccggatccaccaacctg
gataattctctggattcaatcccgttcatagacgaaccctccagtcccagcctcgacctg
gacagcacgcacatccccgcctccgtggtcatctgcgggacgcccgccatcaccaccatc
ccgcccagccccacctcctcctcgccgctcattcgccgccagctgtcacacgaccaagat
tctttccgtctcacaattgtcgagtcagattcgggttctaaaaccgagcggtccaagtcg
tacgacgaaggtctggacaactatcacgacggcagagggagatctttgataccaggcctg
aaaggtttgaggaaggcgatagaccgctcctcggaggattccggctcccggggagactcg
tcgtccgacgtcttctgcgacgccaccaaagagggtttcctgcatttcaagcagcttcac
acagacaagggaaagcgtgtgggaggaggcatgcggccgtggaagcaggtgtacgccgtg
ctgaggggtcacggcctctgcctttacaaggacagaaaagagggacaagctcacgccagc
tgccagacggcggaggagccgctgcagatcagcatcaaggcctgtctgatcgacatctcc
tacagcgacaccaagaggaagaacgtcctgcggctgaccacgtccgactgcgagtacctg
ttccaggccgaggaccgcgaggacatgctggcctggatcagggtcatccaggagaacagc
cacctggatgaggagagcgccgtcttcagcagccatgacctcatcagcaggaaaatcaag
gagtacaacaccctgatgagcccaacaggcagcaagagcgaaccctcgcccagaacgtct
cgccagtcgctgagcatcagacagacgctgctgggaggaaaaggagacggcaaaactcca
agtcctcaatcccccaaagctgacgtggagaagaggagcatgctcaaagacgacaccagc
ccccccaaggataaagggacgtggaggaaaggcctcccgggactcatgaggaagccgttc
gagaagaagccgtccgcaggcgtcaccttcggagttcggttagacgactgtcctccggca
cacaccaacaagtttgtgcctctgattgtggaggtttgctgcaagctggtggaggagaga
ggtctggagtacaccggcatctacagagtccccggcaacaacgccgccatctccaacatg
caggaggagctgaacaacaagggcgtgagcgacatcgacgtgcaggacgacaaatggaag
gacctgaacgtgatcagcagcttactcaagtccttcttccgtaaacttccagaaccgctg
ttcaccaacaggaggtacgcggacttcatcgatgccaacaggatcgaagacccggtggag
aggctgaaagttctgaagaggctgctgcacgagttaccggaccatcactacgagacgctc
aagttcctgtccgctcatctgaagaccgtcgctgaaaactctgagaaaaacaagatggaa
ccgaggaacctcgccatcgtgttcggccccactctggtccggaccacggaggacaacatg
acccacatggtgacccacatgccggaccagtaccggatcgtggagacgctgattcagagc
tacgactggttcttcacagacgacgggaacggagatccggtgacggtttcgcgggaggag
agcgctgtggagtctcagcccgtccccaacatcgaccacctgctcaccaacatcggccgc
accggagcgtcgcagggcgaagtgtcagattctccggctagtgactctgctaaatcaaag
gtgagtgaagggtctgggcgggacccggtcagcagagagctgctggtgtcctccatcttt
gctgccgccagccgcaaacgaaagaagtcaaaggagaaggcgcagcctagcagctccgac
gacgacctggaccccgccttcgccgcgctgaggtccagccaggccgaggcggcgcccgac
ggcgggcgggaggcggcggagctggcgtccaaagccaagcacaggaactccttattcatc
aaggagactccgcccacacagccctcccccaacgtcagcaggaccgcccgccaggggagg
agctccctgtcggacccgccctcccagccggacgagaacacctccgacctcgggaccatg
agctccggcgcctccgtgccgcgctcccgccctaagaagtggacggccggaggctcgccg
gacctgctggtcaacctgggggcgtcgcccagagcagaggtgagctccatcacctccgac
tactccaccacctcctccaacaccttcctgacgggggcggagtccagcgtgctcagcccg
gagctgcagccgggcgaggacgccgacgacgagcgcagcgagctggtcagcgagggccgg
ccaatggagacggacagcgagagcgacttccccgtcttcggcaccgcccagtccaccccc
cacccagagccggacaggaaggagcagcggggggccgccgcggcgcccaaactggaagct
cggcgcctcttcccgtcccagaggatgatcgagggcgacacgctgtcccggcggtggtcg
ctgcggcagaaaaccgacagcgactcgtcggcagagggcgccgcgggcagcgaggggcgc
cccgaggccgccacgcggctgtcccgggtcctggaggtgatgaagaaggggcggtcctcc
agtagcatcagctcgtcctcgcgcagcgagtcggaccgcgccgagccggcctggcacctg
aagatcacggagcggctgaagctccgcctccgctcgtccgcagacgacatgctggcgcca
cggagccggccagccgaggcccgtggcaagaagaggagcatccggcgccgccacaccatg
ggggggcagagggacttcgcggagctggccgtcatccacgactggcgggagcagggcggg
ggcgacggcgccgccgacctgtccgccctggaccgcctcaaaccccggtgctcctctcag
gacttctccatccgggactggatcgcccgggagcgctgccgaggccccgagcccagcgcc
gccgtggcgcccaaagccctccccgaggacgaccccgccgaggctcagggcgccgctccg
gcgggggagcaggtgaacggcggcgcgcctcaaaacaaaaacaaagcgtcggcggggacg
gacccccacccccacaaactgtcaggagcacaggtggtccggtcccggttctaccagtac
ctgtga
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