Oryzias melastigma (Indian medaka): 112151569
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Entry
112151569 CDS
T07439
Symbol
fen1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03030
DNA replication
oml03410
Base excision repair
oml03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112151569 (fen1)
03410 Base excision repair
112151569 (fen1)
03450 Non-homologous end-joining
112151569 (fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oml03032
]
112151569 (fen1)
03400 DNA repair and recombination proteins [BR:
oml03400
]
112151569 (fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oml04147
]
112151569 (fen1)
DNA replication proteins [BR:
oml03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
112151569 (fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
112151569 (fen1)
DNA repair and recombination proteins [BR:
oml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
112151569 (fen1)
Exosome [BR:
oml04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112151569 (fen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
TPR_AP5Z1
Motif
Other DBs
NCBI-GeneID:
112151569
NCBI-ProteinID:
XP_024136328
Ensembl:
ENSOMEG00000016314
LinkDB
All DBs
Position
LG20:14612319..14616379
Genome browser
AA seq
380 aa
AA seq
DB search
MGIHGLAKLIADHAPAAIKEQDIKSYFGRKIAIDASMCIYQFLIAVRQDGNVLQNEDGET
TSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSSELEKRGERRAEAEKLLAQAQEMGEQ
ENIEKFTKRLVKVTKQHNDECKKLLSLMGVPYIEAPCEAEASCAALVKEGKVFATATEDM
DGLTFGTNVLLRHLTASEAKKLPIQEFHFNRILQDMDLTKEQFIDLCILLGCDYCGTIKG
IGPKRAVDLIRQHGCIEEILENIDSKKHAAPEDWLYKEARGLFLKPEVVDCSSVELKWSE
PDEEGLIQFMCSEKQFSEDRIRNGCKKIVKSRQGSTQGRLDSFFTVTGSLSSKRKEAETK
GPAKKKQKTGATPGKFKKGK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggaatacacggacttgccaagctgattgctgatcatgcccctgctgcaatcaaagag
caagacattaagagttactttggcaggaaaattgccattgatgcctccatgtgcatctac
cagttcctgattgctgtgagacaggatggtaatgttctacagaatgaagatggagaaacg
acaagccacctgatgggaatgttctaccgtacgatccgcatgctggagcatgggattaag
ccagtgtatgtttttgatgggaagcctccacaacttaaatcatcagagcttgagaagaga
ggagaaaggagggcagaagctgagaagctgcttgctcaagcacaggaaatgggggaacag
gaaaatattgagaaattcaccaaacgtctggttaaagtgactaagcagcataacgatgaa
tgcaaaaagctgctctccttgatgggagttccttacattgaggctccatgtgaggcagag
gccagctgtgctgctttagttaaagaagggaaggtctttgccacggcaacagaggatatg
gacggcctgacctttgggacaaacgtgctgctcagacatctcacagccagcgaagcaaaa
aagcttcccatccaagagttccactttaatcgcatcttgcaggacatggacctgaccaaa
gagcagttcatcgatctgtgtattctgctgggttgtgactactgtggcaccatcaaggga
attggccccaaaagagccgtggacttgatccgacagcacggttgcatcgaggaaatccta
gaaaacatcgactcaaagaaacacgcggccccagaggactggctgtataaagaggccagg
ggtctgtttctgaagccggaggtggtggattgttcctctgtggagctgaagtggagcgag
cctgatgaagagggcctgatccagttcatgtgcagcgagaaacagttcagtgaggacaga
attcgaaacggttgtaagaagatcgtaaaaagcagacagggcagcacacagggacgactg
gactctttcttcaccgtcactgggtccctgtcctccaaacgaaaggaagcagaaactaaa
ggaccagcaaagaaaaagcagaaaactggagccacaccaggaaaattcaagaaggggaaa
taa
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