Oryzias melastigma (Indian medaka): 112151600
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Entry
112151600 CDS
T07439
Symbol
bmi1a
Name
(RefSeq) polycomb complex protein BMI-1-A
KO
K11459
polycomb group RING finger protein 4
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112151600 (bmi1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112151600 (bmi1a)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
112151600 (bmi1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
COMM_HN
COMM_domain
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-rbx1
zf-RING_5
zf-RING_UBOX
Prok-RING_4
zf-Nse
Rad60-SLD
CSN5_C
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
112151600
NCBI-ProteinID:
XP_036073417
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All DBs
Position
LG20:12239392..12248204
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AA seq
581 aa
AA seq
DB search
MELSESVQRGLQSLGDQAVLDRGSFPVVVDACFRSLLSSRGDPAVLDLPELKHVDKILLK
QIHAAATTFILEAVKHNADKSTISSSLEELTFNTERVEIFYSTFQKHKKDLELLLSSIGR
GPAHIKDVSWRLQYQMKNGQLDKVNEPFYLISLSTENGGASEDVDFSCTAEQLQDLVGKL
KDAAKSVEKASQMTQRFPAEPSGESRVSRGTRAGASGALFCCVFRSDPAVDAGLSEAAAA
ITDVELRGFCQCPNMHRTTRIKITELNPHLICVLCGGYFIDATTIIECLHSFCKMCIVRY
LETSKYCPICDVQVHKTKPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAEHPVDAS
NGSHEDRGEVADEDKRIITDDEIISLSIEFFDQSRCAGGGADDKQCRDQVTNRRYLQCPA
AMTVMHLRKFLRSKMDIPNTYQVEVMYEDEPLKDYYTLMDIAYIYTWRRNGPLPLKYRVR
PNCKKMKVKHAQQEGQNSTNRSTAESDSASDKAGSPVGAPSTSSSLPSPGTPAQSPHPAH
VPNNVNGTAAAATPQTPTRPFAQYGGKPKKVSLNGSSTSSG
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtccgagtctgtgcagagagggctgcagtctctgggcgatcaggcggtgctg
gaccgcggcagcttcccggttgtagtagatgcgtgtttcaggagtctgctgtcgtcgcgc
ggggatcccgccgtgctcgatctgcccgagctgaagcacgtggacaagatcctgctgaag
cagatccacgccgccgccaccaccttcatcctggaggcggtcaaacacaacgcggataaa
tccaccataagctccagcctggaggagctcacattcaacacagaaagagtagaaatcttt
tatagcacctttcagaaacataaaaaggacttggaactgcttttgtccagcataggcaga
ggtccagctcacattaaagacgtctcctggcgcctgcagtatcagatgaagaacggacaa
ctggacaaagtcaacgagcccttctacttgatatcattgagcactgagaatggaggagct
tcggaggatgtcgactttagctgcacagcagagcagctgcaggatttggttgggaagctg
aaggatgccgccaagagtgtggagaaagccagtcagatgacccagcgattccccgccgag
ccttcaggtgagtctcgggtgtcgcgtggaactagggcgggcgcttcgggggctttgttc
tgctgcgttttccgctccgatccagcggtggatgcggggctctcggaggcggctgcggcg
atcaccgacgtggagctccgaggattctgtcagtgtcccaacatgcaccgcacgaccagg
ataaagatcactgagctcaatcctcacctcatctgcgtcctgtgcggaggatacttcata
gacgcaaccaccatcattgaatgcctccactcattttgcaaaatgtgcatcgtgcgttat
ctggaaaccagcaaatactgtcctatttgtgacgtgcaagtgcataaaaccaagcctctt
ctcaacattagatctgacaaaactttacaggacattgtgtacaaactggttccaggactc
tttaaaaatgaaatgaagagaaggagagatttctacgcagagcaccccgtggatgcctcg
aacgggtcacacgaggatcggggggaggtggcagatgaggacaagagaataatcacagat
gatgaaatcatcagcctctctattgagttctttgaccagagcagatgtgcaggaggtgga
gctgatgacaagcagtgcagggatcaggtgactaacagaaggtacctgcaatgtccagca
gcgatgacagttatgcatctgaggaagtttttgcgcagcaaaatggacatcccaaacacc
taccaggtggaagtcatgtatgaagacgagcctcttaaggattactacacattaatggat
atagcgtatatctacacttggagacggaacggcccgcttccgctcaagtaccgagtccgg
cccaactgtaagaagatgaaggtgaagcacgctcagcaggagggccagaacagcaccaac
agatccaccgcggagagcgactccgccagcgacaaagccgggagtccggtcggggctccg
tccacgtcttcgtcgctgccgagccccggtacgcctgcgcagtcgccgcaccccgctcac
gttcccaacaacgtgaacgggaccgccgctgccgccacacctcagaccccgacccggccc
ttcgcccagtacggtggcaaacccaagaaggtttccctgaacggctcgtcgacctcctct
ggatga
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