KEGG   Oryzias melastigma (Indian medaka): 112151600
Entry
112151600         CDS       T07439                                 
Symbol
bmi1a
Name
(RefSeq) polycomb complex protein BMI-1-A
  KO
K11459  polycomb group RING finger protein 4
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    112151600 (bmi1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oml03036]
    112151600 (bmi1a)
Chromosome and associated proteins [BR:oml03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     112151600 (bmi1a)
SSDB
Motif
Pfam: RAWUL COMM_HN COMM_domain zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-rbx1 zf-RING_5 zf-RING_UBOX Prok-RING_4 zf-Nse Rad60-SLD CSN5_C zf-C3HC4_4
Other DBs
NCBI-GeneID: 112151600
NCBI-ProteinID: XP_036073417
LinkDB
Position
LG20:12239392..12248204
AA seq 581 aa
MELSESVQRGLQSLGDQAVLDRGSFPVVVDACFRSLLSSRGDPAVLDLPELKHVDKILLK
QIHAAATTFILEAVKHNADKSTISSSLEELTFNTERVEIFYSTFQKHKKDLELLLSSIGR
GPAHIKDVSWRLQYQMKNGQLDKVNEPFYLISLSTENGGASEDVDFSCTAEQLQDLVGKL
KDAAKSVEKASQMTQRFPAEPSGESRVSRGTRAGASGALFCCVFRSDPAVDAGLSEAAAA
ITDVELRGFCQCPNMHRTTRIKITELNPHLICVLCGGYFIDATTIIECLHSFCKMCIVRY
LETSKYCPICDVQVHKTKPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAEHPVDAS
NGSHEDRGEVADEDKRIITDDEIISLSIEFFDQSRCAGGGADDKQCRDQVTNRRYLQCPA
AMTVMHLRKFLRSKMDIPNTYQVEVMYEDEPLKDYYTLMDIAYIYTWRRNGPLPLKYRVR
PNCKKMKVKHAQQEGQNSTNRSTAESDSASDKAGSPVGAPSTSSSLPSPGTPAQSPHPAH
VPNNVNGTAAAATPQTPTRPFAQYGGKPKKVSLNGSSTSSG
NT seq 1746 nt   +upstreamnt  +downstreamnt
atggagttgtccgagtctgtgcagagagggctgcagtctctgggcgatcaggcggtgctg
gaccgcggcagcttcccggttgtagtagatgcgtgtttcaggagtctgctgtcgtcgcgc
ggggatcccgccgtgctcgatctgcccgagctgaagcacgtggacaagatcctgctgaag
cagatccacgccgccgccaccaccttcatcctggaggcggtcaaacacaacgcggataaa
tccaccataagctccagcctggaggagctcacattcaacacagaaagagtagaaatcttt
tatagcacctttcagaaacataaaaaggacttggaactgcttttgtccagcataggcaga
ggtccagctcacattaaagacgtctcctggcgcctgcagtatcagatgaagaacggacaa
ctggacaaagtcaacgagcccttctacttgatatcattgagcactgagaatggaggagct
tcggaggatgtcgactttagctgcacagcagagcagctgcaggatttggttgggaagctg
aaggatgccgccaagagtgtggagaaagccagtcagatgacccagcgattccccgccgag
ccttcaggtgagtctcgggtgtcgcgtggaactagggcgggcgcttcgggggctttgttc
tgctgcgttttccgctccgatccagcggtggatgcggggctctcggaggcggctgcggcg
atcaccgacgtggagctccgaggattctgtcagtgtcccaacatgcaccgcacgaccagg
ataaagatcactgagctcaatcctcacctcatctgcgtcctgtgcggaggatacttcata
gacgcaaccaccatcattgaatgcctccactcattttgcaaaatgtgcatcgtgcgttat
ctggaaaccagcaaatactgtcctatttgtgacgtgcaagtgcataaaaccaagcctctt
ctcaacattagatctgacaaaactttacaggacattgtgtacaaactggttccaggactc
tttaaaaatgaaatgaagagaaggagagatttctacgcagagcaccccgtggatgcctcg
aacgggtcacacgaggatcggggggaggtggcagatgaggacaagagaataatcacagat
gatgaaatcatcagcctctctattgagttctttgaccagagcagatgtgcaggaggtgga
gctgatgacaagcagtgcagggatcaggtgactaacagaaggtacctgcaatgtccagca
gcgatgacagttatgcatctgaggaagtttttgcgcagcaaaatggacatcccaaacacc
taccaggtggaagtcatgtatgaagacgagcctcttaaggattactacacattaatggat
atagcgtatatctacacttggagacggaacggcccgcttccgctcaagtaccgagtccgg
cccaactgtaagaagatgaaggtgaagcacgctcagcaggagggccagaacagcaccaac
agatccaccgcggagagcgactccgccagcgacaaagccgggagtccggtcggggctccg
tccacgtcttcgtcgctgccgagccccggtacgcctgcgcagtcgccgcaccccgctcac
gttcccaacaacgtgaacgggaccgccgctgccgccacacctcagaccccgacccggccc
ttcgcccagtacggtggcaaacccaagaaggtttccctgaacggctcgtcgacctcctct
ggatga

DBGET integrated database retrieval system