Oryzias melastigma (Indian medaka): 112151625
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Entry
112151625 CDS
T07439
Symbol
myom1b
Name
(RefSeq) M-protein, striated muscle isoform X1
KO
K24495
myomesin
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112151625 (myom1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112151625 (myom1b)
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
112151625 (myom1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
V-set
Pur_ac_phosph_N
Ig_J_second
C2-set_3
Ig_CD22
C2-set_2
Motif
Other DBs
NCBI-GeneID:
112151625
NCBI-ProteinID:
XP_024136407
LinkDB
All DBs
Position
LG20:6197727..6232684
Genome browser
AA seq
1469 aa
AA seq
DB search
MSGSIPFYQKHHRHYDRGYRSTEAEAKMSHYKSSSRYSAGSSISSTRTRGLNVSSHSGLE
EIKLSPVPKRSKPSYLAVDKENQIIGYVVPIFRGSQEFTSGMSDTEETRVRETAGYMARR
NLFTKGLEMERSEVISRKEAMRESAERISLNKRIHEHEEHFKRMNEDSLMHPPEFVIKPR
SHTVWEKQCVRLHCTVSGWPDPRVIWYKNNVAIDPITSPGKYKLESRYNVHSLEINKCDF
DDTAQYRVSAMNSQGEQSAFASVVVKRFKGEVDEALPLPRRTVAEDGPISEYGITFQTHI
VDKFGVSFGREGETMSLGCTVIIYPALHRYQPEIQWYRDDVLLTPSKWTHVHWSGDRATL
TLTHLNKEDEGLYTLRVITKSGYETYSAYVFVRDADAEVEGAPGAPLDVRCLDANKDYII
VSWKQPAIDGGNPIVGYFVDRCEVGTNHWVQCNDTPVKFARFPVTGLVEGRSYIFRVRAV
NKSGMSRPSRVSEPVAAMDPADRLRMRGTSAPWTGQIIVTEEEPSESVVPGRPLDLQVTE
ATKNYVVLSWKPPGEKGLEGVMYYVEKCVVGTDSWQRVNTELPVKSPRFALFDLAEGKSY
HFRVRCCNAAGVGEPSEPTEATTVGDKLDIPSAPGKVVPTRNTDTSVVVSWEASSDAKEL
VGYYIEASILDSGVWEPCNNKPVKATRFVCHGLVTGEQYVFRVRAVNAAGLSQFSPVSEP
VEVKAAIASPAPPYGISVLECVRDSMVLGWKQPTFIGGADITGYFVDYREVIDGVPGKWH
EANIKAVSERAYRVSDLQENKKYQFQVRAANMAGVGIPSLPSETFLCEEWTIAVPGPPHD
LQIREVRGDSLVLLWKPPVYQGRDPVNGFYVDIKEADAPEEAWRGVNTKAVEKQFIKIKN
LKEGETYVFRVRAQNKAGVGKASDVTEPIPALTKPGTKEIVVEVDDEGVISLNFECCDTT
PDSKFVWSKNYEEITESSRLTIETKANKSKTIFNTPGEEDIGIYSCLVTHTDGASSSYTF
STEELKRLLEISHDHKFPIIPLKSELAVELLEKGRVRFWLQAEQMTANGKIDYVFNDNVV
SQGEKYKMNFDKNSGVIEMVMESLTPGDEGTYTFQLKDGKATNQSSLVLIGDVFKQLQKE
SEFQRKEYFRKQGPHFIEYLGYEVSPECCVVLKCKVGNIKKDTSALWSKDKHQIKADEQL
GFTEGVLKLEIAQISKKDSGVYEVVLKDDRGQDTSTLSLVDQGFKDLMNEVFSYIANSST
PLKITSTDEGIRLYTFVSYYNDLLQVTWQHKDSAIAFSDRIKSGVVGEQLWLQITDPTEK
DMGKYAIEFNDGKGGLRRTVELSGQAFDDAFAEFQRLKAAATAERNRARVAGGLPDVVTI
QEGKALNLTCNISGNPVPEVTWLKNDREITSDEHCILKFESGKFASFTITAVNTSDSGKY
SILVKNKYGTESGDFTVSVFIPEEAGKKK
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggtctataccgttctaccagaagcaccatcgccactacgaccgtggctatcgc
agcacggaggcagaggctaaaatgagccactacaaatccagcagcagatattctgctgga
agcagcatctcctccaccaggaccaggggactaaacgtgtcttcacactctggattggag
gaaatcaaattaagcccggtccccaagagatcaaagccatcttatttggctgtggacaaa
gagaatcaaatcatcggctatgtagtgccgatcttcagaggcagccaagagtttacgtca
ggaatgtcagatacagaggaaaccagagtgagagaaactgctgggtacatggcacgcagg
aatttgttcaccaaaggtctggagatggagaggtcagaggtgatctccaggaaggaggcc
atgcgtgagtcggctgagcgcatctctctgaacaaaaggatccatgagcacgaggaacac
ttcaagcgcatgaacgaagacagcctgatgcaccccccagagtttgtgatcaaaccccgc
tcccacactgtgtgggagaagcagtgtgtgcggctgcactgcaccgtcagcggctggccg
gaccccagggtcatctggtacaaaaacaatgtggccattgaccccattacttcccctggc
aaatataaacttgagagcagatacaacgtgcactcactggagatcaacaaatgtgatttc
gatgacacagcccagtatcgtgtctctgctatgaactctcaaggagaacagtccgcattc
gcctctgttgttgtcaaaaggttcaaaggggaagtcgatgaagctctgcctctacccaga
cggaccgttgctgaagatggcccaatttctgagtacggcatcacctttcagacacacatt
gtcgataagttcggagtgtcgttcggaagagagggcgagactatgagcctggggtgtaca
gttataatctatcctgccttgcaccgctaccagccagagatccagtggtacagagacgat
gtactactgaccccatctaaatggacccacgtgcactggagtggagatcgggccacactg
acgctcacacacctcaacaaagaggatgaggggctttacaccctgcgagtcatcaccaag
tccggatacgaaacctactcggcctacgtctttgtcagagatgctgacgctgaggtggaa
ggtgctcctggtgctcctctggatgtgcgctgtctggatgccaacaaggattacatcatt
gtttcctggaagcagccagctatagatggaggaaaccccattgtgggctactttgtggac
aggtgtgaggtgggaaccaatcactgggttcagtgcaatgacactccggtcaagttcgct
cgtttccccgtcactggtttggtggaggggcgctcttacatcttccgtgtacgtgctgtc
aacaagagcggcatgagtcgcccatccagagtctctgagccggtggcggccatggaccca
gcggatcgccttcgtatgagagggacttccgctccctggactgggcaaatcatcgtcaca
gaggaggaaccttcagagagtgttgttcctggcagacctctggatctacaggtcaccgag
gcgaccaagaactatgttgttttgagctggaaaccgcctggagagaaaggccttgaaggc
gtcatgtactatgtggaaaagtgtgtcgttggcacagacagctggcagagggtgaacaca
gagctgcccgtaaaatcccctcgctttgctttgtttgatctcgcagagggaaaatcctac
cacttccgggtccgctgctgcaacgctgctggtgtcggcgaaccttctgaaccaactgaa
gccactacagttggcgacaagcttgacatcccatcggctccaggaaaggtcgttcccacc
agaaacacggacacatcggttgttgttagctgggaagcgtctagtgatgctaaagagttg
gtggggtactacatcgaggctagcattctggacagtggcgtctgggagccgtgcaacaac
aagcctgttaaggccaccaggttcgtctgccatgggctggtgacaggagaacagtacgtg
ttcagagtgagggcagtgaatgcagcaggactcagccagttctctccagtgtcagagcct
gtggaagtgaaggcagcgattgcctcacctgctccaccctacggcatctctgttctggag
tgtgtgagggactccatggtgctgggctggaagcagccgaccttcatcggaggcgcagac
atcaccggctacttcgtggactaccgtgaggtcattgatggcgttccagggaagtggcat
gaggccaacatcaaggcggtcagcgagagggcttacagggtgtccgacctgcaggaaaac
aagaagtatcagtttcaagtgcgggccgccaacatggccggtgtcggcatcccctcactg
cccagtgaaaccttcctgtgtgaggaatggaccattgctgtgccaggacctcctcatgac
ctgcagatcagggaggtgcgaggcgactctctggtattgctgtggaagcccccggtctac
cagggccgagatcccgtcaacgggttctacgttgacatcaaggaggcagacgcaccagag
gaggcctggagaggagtgaacaccaaggctgtggaaaaacagttcatcaagattaagaac
cttaaggagggggagacctatgttttccgggtgcgtgctcagaataaagccggtgttgga
aaagcctcagacgtcacagaaccgatcccagctctgaccaaaccaggtactaaagagatc
gtcgtggaagtcgacgatgaaggcgtcatctccctgaactttgaatgctgcgatacaact
cccgactccaaatttgtgtggtccaagaactacgaggaaatcacagagtcctcccgcttg
actatcgagaccaaagcaaacaagtccaaaactattttcaatactcccggggaggaagac
atcggcatctactcgtgtctcgtcacccatactgatggtgcttcatccagctacactttc
tctacagaagagttgaagaggctgctggagatcagtcatgaccacaaatttcccataatt
ccactgaaatcagagttggccgtggagctgctggaaaagggaagagtgcgcttctggctg
caggcggagcagatgacagcgaacggcaaaatcgactacgttttcaatgacaacgtcgtc
tctcagggcgagaaatacaagatgaactttgacaaaaacagcggcgtgattgagatggtc
atggagtctctgacccctggagatgagggcacctacaccttccaactgaaggatggaaaa
gctacaaatcagtccagcttggtgctgattggtgatgttttcaagcaactacagaaagaa
tctgagttccagaggaaagaatatttcagaaagcaaggtcctcactttatcgagtatttg
gggtacgaggtgtctccagagtgctgcgtcgtactgaagtgcaaggtcgggaacataaag
aaggacacttcagctctgtggtccaaagacaagcatcagatcaaagcagacgagcagctg
ggtttcacagagggagttctgaagctggagatcgctcagatttccaagaaggattccggt
gtgtatgaggttgtcctgaaggatgacagaggacaggacacctctactctcagtctggta
gatcaaggtttcaaagacttaatgaatgaagtgttcagctacatagccaattcctcgacc
cctctgaagatcacgagtacagacgagggcatccggctctacaccttcgtcagctactat
aacgatttactccaggtcacatggcagcacaaggattctgccatcgccttctccgaccgc
ataaagagtggcgtggtgggagagcagctgtggcttcagatcaccgatcccacggagaaa
gacatggggaagtacgccatcgagttcaacgacggcaagggaggcctccggaggactgtg
gaactctctggtcaagcgtttgatgatgcctttgcagaattccagagactcaaagctgct
gccacagcagagagaaatcgtgcccgggtagcaggaggtctgcctgatgttgtcaccata
caggagggcaaggctctcaatctgacctgcaacatttcgggtaacccagtgccagaggtg
acctggctgaagaatgacagggagatcacatctgacgagcactgcatccttaagtttgag
tcgggcaagttcgccagcttcaccatcactgctgtgaacacctcagactctggcaaatac
agcatcctggtgaagaacaagtacggcacagagagcggcgacttcaccgtaagtgtcttc
atccccgaagaggccggcaagaaaaaataa
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