Oryzias melastigma (Indian medaka): 112151696
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Entry
112151696 CDS
T07439
Symbol
tubgcp6
Name
(RefSeq) gamma-tubulin complex component 6
KO
K16573
gamma-tubulin complex component 6
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112151696 (tubgcp6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112151696 (tubgcp6)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
112151696 (tubgcp6)
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
112151696 (tubgcp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
AAA_23
Motif
Other DBs
NCBI-GeneID:
112151696
NCBI-ProteinID:
XP_024136479
Ensembl:
ENSOMEG00000009031
LinkDB
All DBs
Position
LG6:13196029..13235158
Genome browser
AA seq
1907 aa
AA seq
DB search
MYLSSNTRSKPGPNSSSITELLGALCDCSLSGVSWKRRAVGGVSRESFHRALKKRAYGAL
LSKVFQDGTKGSPPGQSATSSTPPRNKVLMMCFDLRVAGCREEAEALEEQLGRLPDGASS
DLKEVDAVLELLVFLAGSAPPPTASFNRDYMRRERPVLRRPQPWSYQSEELQRLEARAWG
LVCGEEWGTLESLCVAQRLMDAPPGTGLLALRTKLDAEEKFEKETRMSLFGALQHTRTSD
MDIRLDIPPVPSNVDVTGLAIRVPHCLDQSEDEGFQSASNLTPDSQSEASPVPDFDLWEA
LRTFEPERRRCWESIGCPPGKRDSLYLTEGGREAFDQLYRLWEGQMRVVSTNTPSPVLPL
PLDSQTQLVSDLLNVLIGVASSTFPLNQNVQFDVRPGVCISGASPESVSRLLGELAQYGT
YYLRLSRFSLQSADKRGLVFQAFTGGLRKYLHYYRACVLSTPPTLNLLTISFLFRKVGRQ
LRYLSELCCVDGLLGAGQATFPVGIKLLSYLYNEAQNNCSNENYPVLLSLLKSSCAPYTR
FVSDWVYNGVFRDVYGEFMIQVNEEYLNFRDKHFWIQGYTLISKDVEECVPIFLKHIAND
VYVCGKTINLLKICCPQHYICWSELPAPRIAVTFSLQEVEEIERECAVYRGRMERIAKHS
AVSREEQALRTEKARQELINQVRECAAKTLESIRGRQVSLRLAEEAKKRERFEELKQHLE
QEQEWRNAAKKKQEADDFSFTRELRDREKRLQALEEQLEQRARKELIAQYSRLSEEAALR
ERRALWRVQRMRLDDARTQFFMVDRQKIQAILEKYPLGKERPPTEELQPIPLPQQTMKCP
TQEEPSEEAQNTEVESPPRDPNTSFGLIPEEFNDSDPNSLKPDSQQVDKALEIIGSELPQ
ALPCAQLIDYDFSAPFSPLEGIIGQTTIQARPRWGPAVLPKMLQSQIAPEENFLHQVQED
NPKPSPFGHPSQSSFVLGQYTPEEPQRTTALGHRALTSVQQVDGIGLEAEEPAFKPKEDG
NVKSSPDGKEDECQSVTTEKSDAAEGPTVTVEENGNDQGDGRQQLGLSEDGVEPDGLNTL
SSGALDTASDNLLPRQSLVLDDKVPQPSTNIPSHPSDAHIKVGQYVPEVEVLAPSSKAHH
HSSDSHIKIGEHVSEVDTPPPTSSMYGHSSDSHIKIGENVSEFVPLVPAPNIHGHVSDAH
ILIGELVSDVVAPAPLPSIHGHSSDAHIKVGENVADVVTLRPVPSIHGHSSDANIKVGEF
VSNVAESRPRWSKHGHASDCALQPGCVVSGAEAPQQPLPGSSYGHSSDSILGVGCVVSGH
EPKPSPLPGSEHGHSSDSNLGTGCIVSKTEPPPSQLPGSSYGHSSDSILGVGCVVSGHEQ
KPSPLPGSEHGHSSDSNLGTGCIVSKTEPPPSQLPGSAYGHSSDSNLGVGCVVLGAEQPL
AVLPGSTYGHSSDSSLGVGCVVKEKDDGHLKKSMEEDGKGIGCEQLEENTSHVLGVKSSS
GESYEEEYISALSSHYQVEHYEDFYNFLDLSPESHLLKQVTRGPWGLPMEPTLRRATDST
SIQQSEMVSLPVLIKHSVTAPLITHVSLVNKAVVDYFFVEIGVEKHFEVLRHFLLMEDGE
FAQSLSDLLFEKMVSGQTPGELLTPLVLNSILSKALQYSLHGDTPLAANFTFALRFLPET
FHPHAPDSLNCLELRYKVDWPLNIIITDSCMNKYNRLFSFLLQLKHMVWSLRDVWFHLKR
TALVKGAGRSVQFRQLQLYRHEMQHFVKVIQGYIANQILQVSWSEFTAKLATVNDLDAIH
RTHADYLNRAIFRGLLTDKAAPVMNIIHSIFSLILKFRAQLIAQPWDNQQGEAVHPSFIA
MQQSYNTFKYYSHFLFKVVTKLVNRGYQPHLEDFLLRINFNNYYKDS
NT seq
5724 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgagttctaacacccgttcaaagcccggccccaacagcagcagcatcactgag
ctgctcggcgctctgtgtgactgcagcctctccggggtgtcatggaagcgccgggctgtg
gggggagtctccagagagagctttcacagagctctcaagaagcgtgcctacggtgccctg
ctgtcaaaagtctttcaagatggcaccaaaggctccccgccgggacaaagcgcaacaagc
agcacgccacccagaaacaaagtcctgatgatgtgttttgacctgcgcgtggcggggtgc
agagaggaagcagaagctttggaggagcagctgggaaggctgcccgatggagcttcctct
gatctaaaagaagtggatgccgtccttgaacttctggtctttctcgctggttctgcacct
ccacccactgcctcctttaacagggattacatgaggcgagaaaggcctgtgctgcggaga
cctcaaccctggagttatcaaagtgaggagctgcagagactcgaggcccgagcgtggggt
ttggtttgtggggaggagtggggcactctggagagtctctgtgtggctcagaggctgatg
gatgctccgcccgggacggggctgttggctctgagaactaaacttgatgcagaagaaaag
tttgagaaggagaccagaatgtctctgtttggagcccttcagcacacacgcacatccgac
atggacataagactggacatacctcctgttcccagtaatgttgacgttactgggctggct
attagggttccccactgcttggatcagtcagaggatgaaggctttcagtctgcttcaaat
ctgaccccagattctcagtccgaggcgagccctgttccagactttgatctttgggaggct
cttcgcacctttgagcctgaaagacggcgctgctgggagtctattggctgtccaccagga
aaacgcgactccctctacctaaccgaaggaggcagggaggcttttgaccagctgtatcgg
ctatgggaggggcaaatgagggtagtgagcacgaatacaccttctcccgtcctcccgctg
cctctggactctcagacgcaattggtgtctgacctccttaatgtcctgattggagtggcg
tccagcacctttcctctcaaccagaatgttcagtttgacgtcagacctggcgtctgcatc
tcaggagcttctccggagagcgtgtctcgtctcttgggagaattagcccagtatggcaca
tactacctgaggcttagccgcttctctctgcagagcgctgacaagaggggcctcgtcttc
caggctttcaccggaggactgagaaagtacctgcattactacagggcttgtgttcttagc
actccgcccactctcaacctgttgaccatcagctttctcttccgcaaagtgggccgccaa
ctcaggtacctgtcagagctgtgctgtgtcgacgggcttttgggtgctggccaagccacc
tttcctgtgggaattaaactgctgtcctacctgtacaacgaagcccagaataactgcagc
aacgaaaactatcccgtcctgctgtcactgctgaagagcagctgcgcgccttacacgcgg
tttgtttctgactgggtttacaacggcgtttttcgagatgtttatggtgaattcatgatc
caggtcaacgaagaatacctcaactttagggacaaacacttctggatccaaggctacact
ctgatctcaaaggatgtagaggaatgtgtgccaattttcctgaaacacattgccaacgac
gtgtacgtctgtggaaagaccatcaacctcctcaaaatctgctgtccacagcactacatc
tgctggtcggagctgccagcaccccgcatcgctgtcaccttctccctgcaggaggtggag
gagattgagagggagtgcgcagtgtatcgcggacgcatggaaaggatcgctaagcacagt
gccgttagccgggaggagcaagctctacgaacagaaaaagcccgccaagagctgatcaat
caggtcagagagtgtgcagccaaaaccctggagagcattcgtgggcgtcaagtgtcacta
cggctggctgaggaggccaaaaaaagggagcgctttgaggagctgaagcagcacttggag
caagagcaagagtggcgaaatgcagccaaaaagaagcaggaggcggacgacttcagcttt
accagagagctgagagacagagaaaagaggctacaagctctggaggagcagctggagcag
agagccagaaaagagctgattgctcagtacagccgtctgtcagaagaagcagctctccga
gagagacgggcgctgtggagagtgcagcgaatgagactggatgacgcccgcactcagttc
ttcatggttgacaggcagaaaatacaggcgatactggagaaatatcctttaggcaaagaa
cgacccccgacagaggaactgcagcccatcccccttccacaacaaacaatgaaatgtcca
actcaggaggaaccatcagaggaggctcaaaacactgaagtggagtcccctccacgagat
ccaaatacgtcttttggtctcatccccgaagagttcaatgactcggaccctaactcacta
aagccagacagtcagcaagtggataaagccctagagatcattgggtctgaactacctcaa
gccttaccctgtgcacagctcatagactatgactttagtgccccctttagtccacttgag
ggtatcattggtcaaaccacaatccaggcaaggccacgttggggaccggcagtcctgcct
aaaatgttgcaaagccagatagcccctgaagaaaactttcttcatcaagttcaagaggac
aaccccaaacccagcccctttgggcatccctctcagtccagcttcgttttggggcagtac
acaccagaagaaccccagagaaccactgctcttggacatcgtgcactcacctcagttcaa
caagtagatggaatcggcttagaggcagaggaacctgctttcaaaccaaaagaagatgga
aatgtgaaaagttcaccagatggaaaggaagatgagtgtcaatctgttacaactgagaaa
agcgatgcagcagaaggtcctactgtgacagtggaggaaaacggcaacgatcaaggtgat
ggcagacaacagttaggtctttctgaggatggagttgagccagatggactaaacactctg
agctcaggagctctcgatacagcttctgacaatctcttacctcgtcaaagtcttgtttta
gacgataaagtccctcaaccctcgacgaacattcctagccacccgtctgatgctcacatc
aaagttggacagtatgttcctgaagtggaggttctggctccatcttcaaaagctcatcat
cattcatccgactcccatatcaaaattggagaacatgtttcagaagtcgacacccctccc
ccaacctccagcatgtacggacactcttccgattctcacatcaaaataggggaaaacgtt
tctgagtttgtcccgctggttcctgctccgaatatccacggccacgtgtccgatgcccac
atcctcattggggagctggtgtcggacgtggtagcgcctgcgcctttgcccagtattcac
ggccatagttcagacgctcacattaaagtgggtgaaaacgtcgcagacgtcgtcactctt
cgtcctgttcccagcattcatggtcactcttcagacgctaacataaaagttggcgagttt
gtgtccaacgttgcagaaagtcgacctcgatggagtaagcacggtcacgcctcggactgc
gccctccagccgggatgcgtggtgtccggagcagaagcgcctcagcagcccttacctgga
agctcttacggccactcgtccgactccatactaggcgtcggatgtgttgtttcaggacac
gaaccaaagccgtctcctttacctggcagcgagcacggccattcatcggactcaaattta
ggcactggctgcatcgtctccaaaacagaaccgccgccgtcacagctacctggaagctct
tacggccactcgtccgactccatactaggcgttggatgtgttgtttcaggacatgaacag
aagccgtctcctttacctggcagcgagcatggccattcatcggactcaaatttaggcacc
ggctgcatcgtctccaaaacagaaccgccgccgtcacagctacctggcagcgcatacggt
cactcgtcggattcaaacctgggagtcgggtgtgtggtcttgggagcagagcagccgctc
gccgtacttcccggcagcacgtacggccactcatctgactcttcactcggagtgggctgt
gtggtgaaagaaaaagacgacggacatctgaaaaagtcaatggaggaggacggcaaaggc
atcggctgcgagcagcttgaagaaaacacgtcccatgtgttgggtgtgaagtcgtcctcc
ggtgaaagctacgaggaggaatacatctcggcgttgtcttctcattaccaggtggaacac
tatgaggacttttacaactttttggacctgtctccagagagccatctgctgaagcaggta
actcggggcccatggggtcttcctatggagcccacgctccgcagagccacagactccaca
tctatccagcagagtgaaatggtttcactgcccgtgctgataaaacactcggtcactgcc
ccactcatcacacacgtgtctttggtgaataaagctgtggtggactacttctttgtggaa
ataggtgtggaaaagcactttgaggttctgcgccacttcttgctgatggaagatggcgag
tttgcacagtcgctcagcgatctgctctttgaaaagatggtcagtggtcagacacctggc
gagctgctcacccctctggtcctcaactccatcctcagtaaggcgctgcagtacagctta
cacggggacacgcctttagccgcaaactttacgtttgccctccgcttccttccggagacc
ttccacccccacgcgcccgactctctgaactgtctggagctgcgctacaaggtggactgg
cctttgaatatcatcatcactgacagctgcatgaacaagtacaaccgcttgttttcgttc
ctgctgcagctcaaacacatggtgtggagcctccgggacgtctggtttcacctcaagagg
acagctctggtgaaaggcgccggccgctccgtgcagttccgccagctgcagctgtaccgc
cacgagatgcagcatttcgtcaaagtcattcagggctacatcgctaaccagatcctgcaa
gtgtcctggagtgagttcactgccaagctggccaccgtcaatgacctggatgccatccac
cgcacacatgcagactacctcaacagagccatcttcaggggtcttctgacagacaaagca
gcccccgtcatgaacatcattcacagcatctttagtctgatcctcaagtttcgggctcag
ctaattgcacagccgtgggacaaccagcagggggaggcggtgcatcccagcttcattgcc
atgcagcagtcatacaacaccttcaagtattactcccacttcctttttaaagtggttaca
aagctggtgaacagaggatatcagccgcatttggaggattttctgctgcgaattaatttc
aataactactacaaagactcctga
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