Oryzias melastigma (Indian medaka): 112151709
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Entry
112151709 CDS
T07439
Name
(RefSeq) integrin alpha-11 isoform X2
KO
K06587
integrin alpha 11
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04510
Focal adhesion
oml04512
ECM-receptor interaction
oml04810
Regulation of actin cytoskeleton
oml04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112151709
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112151709
09142 Cell motility
04820 Cytoskeleton in muscle cells
112151709
04810 Regulation of actin cytoskeleton
112151709
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112151709
Cell adhesion molecules [BR:
oml04515
]
Integrins
Integrin alpha subunits
112151709
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
VWA_2
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP_3
FG-GAP_2
Integrin_alpha
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
112151709
NCBI-ProteinID:
XP_024136508
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Position
LG6:complement(522084..546548)
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AA seq
1164 aa
AA seq
DB search
MKKFKIFSGSKDAQFGYTVQQHQAGGRAWLLVGAPFESTAGQQTGDIYKCPLDHRNSANC
SRLNLGKVSIDNVSERKEQMRLGLTLISNPKDNSFVTCGPLWSHECGSSLYSTGFCARAN
RNFKVTHAFAPALQRCETFMDIVIVLDGSNSIYPWYEVQDFITKVLHKFYIGPDQTQVGV
VQYGSTVVHEFSLGEYQTVDTVVEAVRNIDQRGGYETRTALAINVARSEAFQRGGRSGAQ
KVMIVITDGESHDSIELVDAVNNSKNDNITMYAIAVLGYYNRRGIDPKAFLEEIKFIASD
PDEKHLFKVTEESALKDIVDALGERIFSLEGTSSKGQGFGLQMAQAGFSSHLVKDGVLLG
AVGAYDWNGAVLKETKFGKVIPPKSFYQEEFPEALKNHAAYLGYSVSSLVSSRGSQFYVA
GAPRFNHTGKVIIFTLKNSGNLTILRALLGEQIGSYFGSELLSMDIDNNGYTDYLLIAAP
MFYRDGWERGRVYVYSLGPQTSFILQEVLEVSDRSQNSRLGSALAQITDMNGDGCSEVVV
GAPLEDDHQGAVYLFYSRDKIIQPSYKQRLSAAGFSAGLQYFGQSLHGVLDINSDGLVDL
AVGALGAAVIVMSRGVVRIEASLTFQPEKVNIFNKDCRRGGKDVTCMNVTVCLSLDRSVK
TQTKSGTAVGVLYSLVFDERRPSPRAVMDDPQQLLAIFLQTGGQACDRLSFTVQETADFW
RPIVVVMEARLQNPDEGPMLDPDWPSSWRSELHFWNGCEQEENCAPDLVLHSRTDMKNAQ
QYCSWREQTAYSFCEQDDPLFVVESGRRRMVVFARLENQGENAYRAAVNISNSANLLFSR
LLVKGQSDIQIECSITNITATWRSCNITNPFMKSLSQVSFHLEFEFSPSVLLDHARVVME
ASSDGVERNPSDNINSISLPLKFEADLLFTRDPYSPHFGIRADSSSSSWDQSDTPDSTFN
LTFYIQNLGIFSVMDLHFRADIWAVTMAMNQLVDMIDYAIEEQADDSSCSIPHSEETGAA
APEDLSHLSQLNHSNSVSMVVLCRLSVPPSTQVKVTLMGRLRLSVLHAISFKSLELLSAA
SLQLEASSPMFLQEDRPVRQILLHLRKEEETSVPIWIILGSSIGGLLLLGLLVLGLWKLG
FFKRQRRQEEEEEPAASGKSAQQL
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaagatcttctctggctctaaagatgctcagtttggatacacagttcag
cagcaccaggcaggaggacgtgcatggttgctggttggagctccttttgaatccactgcg
gggcagcaaactggtgatatttataaatgtccgcttgaccaccgaaattctgccaactgc
agcagactaaaccttggaaaagtctctatagacaacgtgtctgagagaaaagagcagatg
agactgggactgacactgatctccaacccaaaagacaacagctttgtgacctgtggtcct
ctatggtctcatgaatgtggaagttctctctacagcaccggattctgtgccagagccaac
cgcaatttcaaagtcacgcacgccttcgcacctgctctccaaagatgtgaaacgttcatg
gacattgtcattgttttggatggttcaaactccatctacccgtggtacgaagtccaggat
tttatcacaaaagtcttgcacaagttttacatcggcccagatcaaacacaggttggggtt
gttcagtatggctccacagtggtccatgagttcagtttgggtgaataccagacagtagac
actgtggtggaggctgtcaggaacattgatcagcgtggaggatatgagacaaggactgcg
ctagctatcaacgtggctcggtcagaagcatttcagcgaggcggcaggtctggagctcag
aaggtgatgattgtgattacagacggtgaatcccacgacagcatagaacttgttgatgcc
gtcaataacagcaaaaacgataacatcaccatgtatgccatcgctgtgcttggctactac
aaccgcagaggaatcgaccctaaagcctttctggaggaaatcaagttcattgccagtgat
cctgatgagaagcacctctttaaggtcactgaggagtccgcactgaaggacattgtggat
gccctgggagagaggatcttctctctagaagggaccagcagtaaaggtcaagggtttggc
ctgcagatggctcaagctggtttctcctcacatttagtcaaagacggtgttttgcttggt
gctgtgggcgcctacgactggaatggtgccgtgctgaaggaaaccaaattcggcaaagtt
attccaccaaaatccttctaccaagaagagtttccagaagccctgaaaaaccatgcagcc
taccttggttactctgtgagttctttggtttcttcccgtgggtctcagttctatgtagct
ggagctccaaggttcaaccacacgggcaaggtgatcatcttcaccctgaagaacagtgga
aacctgaccatattacgagctctgctgggggagcagattgggtcatacttcggcagtgag
ctgttatccatggacatagacaacaatggatacaccgactacctgctgatagcagcacca
atgttttacagagacggctgggagagaggcagggtctacgtttactctctcggccctcaa
acatccttcattctccaggaagttctggaggtttctgaccgttctcaaaattctcgtctg
ggttcagccttggctcagatcactgatatgaatggagatggctgcagtgaagttgttgtt
ggagctccacttgaggatgaccatcagggtgcagtctacctgttttacagtcgggacaaa
atcatccagccaagctataaacagcgtctgtctgcagcaggcttctctgcaggtctgcag
tattttggacaaagtcttcatggagttctggacattaactcagatgggcttgttgacctg
gcagtgggggctctgggagctgctgtcatagtcatgtctcgtggcgtggtgcggattgaa
gccagtttgaccttccagcctgagaaggtcaacatcttcaacaaggactgccggcgagga
gggaaggacgtcacctgcatgaacgtgactgtgtgtctgagtctggaccggagtgtgaaa
actcaaacgaagagcggaacagcagtgggtgttctctacagtctggtgtttgatgagagg
cgaccctctccgcgggcggtcatggatgacccgcagcagctcctcgccattttcttacag
actggaggtcaggcgtgtgatcggctgagcttcacagtccaggaaactgcagatttttgg
cgtcccatcgtggtcgtcatggaagccaggttacagaatccggatgaaggaccaatgttg
gacccagactggccgagcagctggagatctgagcttcatttctggaacggttgcgagcag
gaggaaaactgcgctccggacctcgtccttcacagtcgcaccgacatgaaaaacgctcag
caatactgcagttggagggaacagactgcctactccttctgcgagcaggacgacccgttg
tttgtggtggaatccgggcgaaggaggatggtggtgtttgctcgactggagaaccaagga
gagaacgcctacagagccgccgtcaacatctccaactctgccaaccttctgttctccagg
ctcttggttaagggtcagtccgacatccagattgagtgctccatcacaaacattacagcc
acttggaggagctgcaacatcactaacccattcatgaagtcactgtcgcaggtgtctttc
catctggagtttgagttcagtccttcagttcttctggatcacgcacgtgttgtcatggaa
gcttctagtgatggagttgagagaaatcccagcgataatatcaacagcatctctctcccc
ttgaagtttgaagcggatctccttttcaccagagacccatactctcctcattttggaata
cgagctgactcctcctcctcatcttgggaccaatcagacactccggattccaccttcaac
ctcacgttttatattcagaacctgggcatcttctcagtgatggacctacacttcagggct
gacatctgggctgtcaccatggcgatgaaccagctggtggacatgatagactacgctatt
gaggagcaggcggacgactccagctgctccattccccacagtgaagaaacaggtgctgcc
gctcctgaagacctgtctcacctgtcgcagctgaaccacagtaacagtgtgagcatggtg
gtcctctgcaggctgagcgtgccgccatcaacacaggtaaaggtgacgctcatgggaaga
cttcggctctccgtgcttcacgctatcagctttaagtctttggagctgctgagtgctgcc
tctctgcagctggaagcttccagtcctatgttcctgcaggaggacagacctgtcagacag
atcctcctgcacctgaggaaagaggaggagacctctgttcccatctggatcattcttgga
agctcgataggcggcctgctgctgctcggccttctggttctgggcttgtggaagctgggt
ttcttcaagagacagagaagacaggaggaagaggaggagcctgcagccagcgggaagtca
gcacagcagctatag
DBGET
integrated database retrieval system
