Oryzias melastigma (Indian medaka): 112151711
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Entry
112151711 CDS
T07439
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2
KO
K10140
DNA damage-binding protein 2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03420
Nucleotide excision repair
oml04115
p53 signaling pathway
oml04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112151711 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
112151711 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
112151711 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112151711 (ddb2)
03400 DNA repair and recombination proteins [BR:
oml03400
]
112151711 (ddb2)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
112151711 (ddb2)
DNA repair and recombination proteins [BR:
oml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
112151711 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
112151711
NCBI-ProteinID:
XP_024136509
Ensembl:
ENSOMEG00000019402
LinkDB
All DBs
Position
LG6:complement(17250814..17256240)
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AA seq
476 aa
AA seq
DB search
MKRKQVKKRSEGDSGASLSKKLKEKKDGKTSEPELPVKPQRRNGHGSILHYIYRNTLGQS
LHSRMRQCLQEPFVRSLSAYHFHGATSPFDRRITCLEWHPTHPTTLAAASKGGDIFLWDF
EKPAKKSFIQGNGAGDFIGGMKFCPTDYSRVYVASGEGKLTLQSFEGQPPTLLSKTSECD
HNHHNLCVWFCCVDVSVSRQMLVTGDNMGQLTLVSLTGQKIFSEKLHKGKVTHAEFNPRC
DWLLATASVDRTVKLWDLRNTKDKKSFLHEMPHERPVNSAYFNPLDSTKLLTTDQQDQIR
VYSSCDWSKPQQIIQHPHRQFQHLTPIKATWHPTYDLIVAGRYPDDRICTGDQRTIDIYD
SNTAELVYQLYDSTASGIKSINKFSPMGDVIGSCMGVTVLVWDHDNSLVSGQHNPKEEFS
SSDDPRRQRRSQQRSSRDRKAPPLDPKLKKKLASLEETETKTKTGSSKSNPKQTKK
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggaagcaagtgaaaaaaaggtctgaaggagactctggagcatcgctgtcaaaa
aaattaaaggaaaagaaagatgggaagacctcggaaccagagctgcctgtcaagccccag
aggagaaatggccatgggagcatcctgcactacatttacaggaacactctgggacaaagt
ctgcactctcggatgagacagtgtcttcaggagccctttgtccgctctctgtcagcctat
cacttccatggtgctaccagtcccttcgatcgcaggatcacctgtctggagtggcacccc
actcaccccaccaccctcgctgcagcctccaaaggtggagacatctttctgtgggacttt
gaaaagcccgcaaagaaaagcttcatccaggggaatggagccggagacttcattggaggg
atgaagttctgccccactgactactccagagtgtatgtggcatccggtgaggggaaactg
accctgcagagctttgaaggccagccacccaccctgctgtccaaaacgtcagaatgtgac
cacaaccatcacaacctttgcgtttggttttgctgcgttgacgtgtctgtgagccgacag
atgctggtgacgggggacaacatgggtcagctgacgctcgtcagtttgaccggccaaaag
attttcagtgagaagttgcacaaaggtaaggtgacccacgcagagtttaacccccgatgc
gactggttgctggcgacggcttctgtcgaccggacggtgaagctttgggacttgaggaac
acgaaagacaagaagagtttcctgcacgagatgcctcacgaaaggcctgtcaactcagct
tacttcaaccccttggactccacgaagctgctcaccacagaccagcaggaccagatccga
gtgtactcatcctgcgactggtcaaagcctcagcagatcatccagcacccacacagacag
tttcagcacctcacccccatcaaggccacatggcatcctacatatgacctcattgttgct
ggacgttaccctgacgaccgcatctgcaccggtgaccagaggaccatcgacatctatgac
tccaacactgcagagctcgtataccagctgtatgactccactgcttcaggaatcaagtct
attaacaaattcagcccaatgggcgacgtgattggatcttgtatgggtgtgacggtgctg
gtctgggaccatgataattctctggtcagcggtcagcacaatccaaaggaggaattctcc
tccagtgatgacccaaggaggcagcggaggagtcagcagcgctccagcagagatagaaag
gcaccacctttggacccgaagcttaaaaaaaagctcgcttccctggaagaaactgagacc
aagactaaaaccggaagttccaagagcaatccaaagcagaccaaaaagtaa
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