KEGG   Oryzias melastigma (Indian medaka): 112151711
Entry
112151711         CDS       T07439                                 
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2
  KO
K10140  DNA damage-binding protein 2
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03420  Nucleotide excision repair
oml04115  p53 signaling pathway
oml04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    112151711 (ddb2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    112151711 (ddb2)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    112151711 (ddb2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oml04121]
    112151711 (ddb2)
   03400 DNA repair and recombination proteins [BR:oml03400]
    112151711 (ddb2)
Ubiquitin system [BR:oml04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     112151711 (ddb2)
DNA repair and recombination proteins [BR:oml03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      112151711 (ddb2)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 112151711
NCBI-ProteinID: XP_024136509
Ensembl: ENSOMEG00000019402
LinkDB
Position
LG6:complement(17250814..17256240)
AA seq 476 aa
MKRKQVKKRSEGDSGASLSKKLKEKKDGKTSEPELPVKPQRRNGHGSILHYIYRNTLGQS
LHSRMRQCLQEPFVRSLSAYHFHGATSPFDRRITCLEWHPTHPTTLAAASKGGDIFLWDF
EKPAKKSFIQGNGAGDFIGGMKFCPTDYSRVYVASGEGKLTLQSFEGQPPTLLSKTSECD
HNHHNLCVWFCCVDVSVSRQMLVTGDNMGQLTLVSLTGQKIFSEKLHKGKVTHAEFNPRC
DWLLATASVDRTVKLWDLRNTKDKKSFLHEMPHERPVNSAYFNPLDSTKLLTTDQQDQIR
VYSSCDWSKPQQIIQHPHRQFQHLTPIKATWHPTYDLIVAGRYPDDRICTGDQRTIDIYD
SNTAELVYQLYDSTASGIKSINKFSPMGDVIGSCMGVTVLVWDHDNSLVSGQHNPKEEFS
SSDDPRRQRRSQQRSSRDRKAPPLDPKLKKKLASLEETETKTKTGSSKSNPKQTKK
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgaaacggaagcaagtgaaaaaaaggtctgaaggagactctggagcatcgctgtcaaaa
aaattaaaggaaaagaaagatgggaagacctcggaaccagagctgcctgtcaagccccag
aggagaaatggccatgggagcatcctgcactacatttacaggaacactctgggacaaagt
ctgcactctcggatgagacagtgtcttcaggagccctttgtccgctctctgtcagcctat
cacttccatggtgctaccagtcccttcgatcgcaggatcacctgtctggagtggcacccc
actcaccccaccaccctcgctgcagcctccaaaggtggagacatctttctgtgggacttt
gaaaagcccgcaaagaaaagcttcatccaggggaatggagccggagacttcattggaggg
atgaagttctgccccactgactactccagagtgtatgtggcatccggtgaggggaaactg
accctgcagagctttgaaggccagccacccaccctgctgtccaaaacgtcagaatgtgac
cacaaccatcacaacctttgcgtttggttttgctgcgttgacgtgtctgtgagccgacag
atgctggtgacgggggacaacatgggtcagctgacgctcgtcagtttgaccggccaaaag
attttcagtgagaagttgcacaaaggtaaggtgacccacgcagagtttaacccccgatgc
gactggttgctggcgacggcttctgtcgaccggacggtgaagctttgggacttgaggaac
acgaaagacaagaagagtttcctgcacgagatgcctcacgaaaggcctgtcaactcagct
tacttcaaccccttggactccacgaagctgctcaccacagaccagcaggaccagatccga
gtgtactcatcctgcgactggtcaaagcctcagcagatcatccagcacccacacagacag
tttcagcacctcacccccatcaaggccacatggcatcctacatatgacctcattgttgct
ggacgttaccctgacgaccgcatctgcaccggtgaccagaggaccatcgacatctatgac
tccaacactgcagagctcgtataccagctgtatgactccactgcttcaggaatcaagtct
attaacaaattcagcccaatgggcgacgtgattggatcttgtatgggtgtgacggtgctg
gtctgggaccatgataattctctggtcagcggtcagcacaatccaaaggaggaattctcc
tccagtgatgacccaaggaggcagcggaggagtcagcagcgctccagcagagatagaaag
gcaccacctttggacccgaagcttaaaaaaaagctcgcttccctggaagaaactgagacc
aagactaaaaccggaagttccaagagcaatccaaagcagaccaaaaagtaa

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