KEGG   Oryzias melastigma (Indian medaka): 112151856
Entry
112151856         CDS       T07439                                 
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4 isoform X1
  KO
K06245  laminin, beta 4
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04510  Focal adhesion
oml04512  ECM-receptor interaction
oml04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:oml00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    112151856 (lamb4)
   04518 Integrin signaling
    112151856 (lamb4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    112151856 (lamb4)
SSDB
Motif
Pfam: EGF_laminin Laminin_N EGF_LMN_ATRN LAMININ_IV_B LAMB4 LAMB1 RMD9_C
Other DBs
NCBI-GeneID: 112151856
NCBI-ProteinID: XP_036068150
Ensembl: ENSOMEG00000004714
LinkDB
Position
LG6:10011439..10144539
AA seq 1835 aa
MKKMVIFLAVFFPAVHFHSLSDLQDQCPSAPCEPPLGDLMVGRQAQLKASSTCGLKGPEQ
YCTTGHLQEARNCFLCDSQLPYSYHSNRNSHWIENIIMSSDPDKNMSWWQSQNGKFRVVE
KVGSCERSSPKPVSPAGVHQVSIQLDLETVFQFSHLVLTFKSFRPAAMVVERSKDFGQTW
KIFRFFADDCALHFPSVLRGPASSIADIICDSRFSGPEPSTGGEVVLQALDPMFEIADPH
AAIIQDLISMTNIRLNFTRLLTLKDTLPARRQRSPVDNYYYALFNMVIRGSCFCNGHATQ
CMPIYREQGNVVTQSGKVHGRCVCHHNTAGHNCERCQEFHHDTPWSPGGETSARVCRKCN
CHGHSEACHFDAARYQLTGGVSGGVCDNCQHYRTGAQCERCQTYMYQDPEKTMDDPRSCI
PCDCDPDGSHGGGLCDALTGQCFCKENVEGWRCDRCKQGFFGLRRENPSGCYECHCHTLG
SVASCDPLTGNCKCDSLAYGPHCDRCVTGFWGLGNSTIRCSPCDCDIGGAHNTRCSSENG
QCHCLPNMIGRTCSEPAHGHFLPPLNYFLYEAELAAPLPEIRLSPSMPTSSSVQSPKVLP
PCEQYFKERGFDFSFSSGQIVLVQRAHQLRSPHKRQLQNIIPLVPGYASQIIPGQKSSDQ
KVKSTGLGLVRVLEGTGLTFTVDNLPSSMKYHLVIHYEQETLSDWLATISIRMLLPGDKG
CSKDSIERMLLNLPDTSRAGILDSPVCLNAGALYLVEVLFYSQPTTEGLHILVDSMGLIP
SVESIQDCSQKTLQPFHCTGLAISPDSQESLPEVCERLIKSLSARIHYGATACECNLTGS
LGPACSKLGGFCECKPNVIGRCCDTCAPLTFGFGSEGCERKDTMDTNPSYTDRGTLHPPF
FILGCECDPRGSSSKWCDQVEGQCMCYSGVVGRRCDHCKAGFWGFPYCRPCECGGRSETC
HGETGACVNCREHTTGGHCDRCAEGYYGNPISRQPCQPCLCPGTLRSGHFFATSCQQDSQ
SLGVSCDCLVGHTGSRCEICLPGFFGDLTAPGFSHCRPCLCNSNTSPDDLYPCDRKTGEC
LHCLHNTSGPQCQACKPGYYGNALTQDCKECSCYRKGTVVSQCPAHGPCFCNPRTGQCPC
RRGTEGDLCDRCEDGYWDLDGWGGCQPCSCHPEHSMSNKCDKVTGQCHCHPEFGGQQCNM
CGENYFGSPELQCFPCDCHLEGTERPSCDPETGECICGSGISGILCDECSPGYDATFPAC
KICHSCASLWAEEITDVQKAARRMKTFIPQPNGTLQQTISSQQQRILDGYFTVGSLVKIM
LMFLPRLQKLDKLCVQIRMLKDSIDTNTILIDPSALLFIEIHGTKQQSKNLLNNLKDNLI
KGKDEERDVKKELLLQILKHHKSFMLNEEGLRNFSTTLENSMDTRHEVLRKLSRCSRIGA
LAKLEQKVKDLSVVTFNHKASKRPCLKNCSVDGAAPCVLLLGGPDCDGGVSISHIALSTL
EKAKDQLIGFQAKLQRAEKKIYNALKLAQTIKDHAKTLQTQLISNAVTLQRKKTHTRDLF
QRAKLLITDNTVSPDDIKEMATDVLSIHLSLSPDEIWSVINVSNNLTSKSGKVQYNLTDL
KNQAAVGQGLLHKVQYSRQQTAGMDIKNINIDIFKVHRSNSRTSENLTKATGDQNNADSH
MKDVESKLDSIKSKLEKAPDLSTEIKNVKDKTEQTNFLVTEATDAAEDGFNDIVDAQGTF
RLVMKLFWAFKKETSALKLAANTPHQLTKIAKGAKDFEKEVEDKFKQTQDVEQRIKWLLN
RKKQKELQLFQLLKIVYSLRQDILSRVVSYSTCSS
NT seq 5508 nt   +upstreamnt  +downstreamnt
atgaagaagatggtaatctttctcgctgtcttttttccagcagtccacttccattccctc
tcagaccttcaggaccagtgccccagcgccccctgtgaacctccacttggtgatctaatg
gtggggcgccaagcgcagctaaaagcttcgtctacttgtggtctaaaaggacctgagcag
tactgcaccactggacacctgcaggaggcccgaaattgttttttgtgtgattctcagctg
ccgtacagttaccatagcaaccgaaacagtcactggattgaaaacataatcatgagttca
gatcctgataaaaacatgtcatggtggcagtcgcaaaacggtaagtttagggttgtggag
aaggttggatcttgtgaaaggagctcacctaaacctgtgtctcctgcaggagttcatcag
gtcagcatccagttggacctcgagacagtattccagtttagccacctggtcctcaccttt
aagagttttcgacctgctgccatggtagtggaacgatcaaaagactttgggcagacctgg
aaaatttttcgattttttgcagacgactgtgcacttcattttccttcagttctgagagga
ccagcatccagcattgctgatattatctgtgacagcagattctctgggccagaaccatct
actggaggagaggtggtccttcaagctctggatccaatgtttgaaatagcagatcctcat
gctgctataattcaggatctgatctccatgacaaatattcgcttgaacttcactcgcctt
ctcacactcaaggacacactgccagctcgcagacaaagaagtcctgtggataattattac
tatgctcttttcaacatggtgatccgtggaagctgcttctgcaatgggcacgccacccag
tgcatgcccatttatagagagcaggggaacgttgttacccagtctggtaaggttcatggg
cgatgtgtctgtcaccacaacacggctgggcataactgtgagaggtgtcaggagtttcat
cacgacactccctggagtcccggaggagaaacctctgctagagtttgcaggaaatgtaat
tgtcatggtcactcagaggcatgtcactttgatgctgctcgttaccagctaacaggcggt
gtgagtggtggagtgtgtgacaactgtcagcattaccgtacaggggctcaatgcgagcgt
tgccaaacctacatgtatcaggatccagaaaagacaatggatgacccacgcagctgcata
ccttgtgactgtgacccagatggttcccatggtggcggtctttgtgatgctttgactggc
cagtgtttctgcaaagaaaatgtggagggttggcgctgtgatcgctgtaaacaaggcttt
ttcggtctgagaagagaaaatccatctggttgttatgagtgtcattgtcataccttgggg
agtgtggcatcctgtgacccattgacaggaaactgtaaatgtgattctttggcttatgga
ccccactgtgatcgatgtgtgactggtttttggggtttgggaaactccaccatcaggtgt
tcaccatgtgactgtgacattgggggggcacacaacaccaggtgttcttctgagaacggg
cagtgtcactgcttacccaacatgattggtcggacttgctcagagcctgcccatggacac
ttcctgcctccactaaattactttttatatgaggctgaacttgctgcaccacttccagaa
attaggttatccccttctatgcctacttcctcctctgtgcagagtccaaaggttctacct
ccatgtgagcagtacttcaaagagaggggctttgacttcagtttttccagcggacagata
gtcttggttcagagggctcatcaacttagaagccctcacaagaggcagcttcagaacatt
atccccctggtgccaggctatgcctctcaaatcattccaggtcagaagtcatctgatcag
aaagtaaagtcgacaggccttggattggtcagagtgttggagggaactgggctcacgttc
actgttgacaacctcccttcatcaatgaagtatcatctggtaatccactatgagcaagag
actctctctgactggttggctacaatcagcatccggatgttgttaccaggggacaaaggt
tgcagcaaagattcaattgaaagaatgcttttgaatctcccggacacctctagggcaggt
attttggactctccggtgtgtctgaatgctggagctctctatcttgtagaggtccttttc
tactcccagcccacaactgaaggcttgcacatcctggttgactctatgggccttattccc
agtgtcgagtcgatccaagactgctctcagaaaaccctccagccttttcactgcactggt
ctggccataagtcctgattcccaggagtcactgcctgaagtctgcgagagactgataaaa
agtctgtcggcacggatccattacggagccactgcatgcgagtgtaacctgactggctct
ctgggtccagcctgcagtaagttaggggggttttgtgagtgtaagcccaatgtgattggc
cgctgctgtgatacctgtgcacctctgacatttggatttggatctgagggctgtgaacgt
aaggacaccatggacacaaatccctcttacactgacagaggaactttacatcctcctttt
tttattttaggatgtgagtgtgaccctcgtggctcaagttcaaaatggtgtgatcaagtc
gaaggtcagtgcatgtgttactctggagtggtaggccggcgctgtgatcattgcaaagca
ggattctggggatttccatactgtcggccatgtgagtgtggcgggcgttctgagacatgc
catggagaaactggagcatgtgtgaactgcagggaacacaccacaggaggacactgtgac
aggtgtgcggagggttactacggtaaccccatctctagacaaccctgtcagccctgtttg
tgtccaggaacattgagaagtggacatttctttgccacttcctgtcagcaagattcacaa
tcccttggtgtgagctgtgactgtttggtggggcatacaggttcacggtgtgaaatatgc
ctccctggtttctttggtgacctgactgcaccaggcttttcccactgcagaccatgtctc
tgcaacagcaacaccagcccagatgacctttacccctgtgaccgtaaaactggagaatgt
ctgcactgccttcataacacaagcggtccccaatgtcaagcatgcaaacctggttattat
ggcaatgccttaacacaagactgtaaagagtgctcctgttaccgcaagggaaccgtggtg
agtcagtgtcctgcgcatggtccctgtttctgcaatcctaggacaggacagtgtccttgc
aggagggggacagaaggagatctgtgtgaccggtgtgaggatggatactgggacctggat
gggtggggtgggtgtcaaccctgtagctgtcaccctgagcactctatgtcaaacaaatgt
gacaaggtgactggacagtgtcattgtcatccagaatttggaggacaacagtgtaacatg
tgtggagagaattattttgggagtccagagctgcaatgtttcccttgtgactgtcacctg
gagggaacagagcggccatcatgtgatcctgaaactggcgagtgtatttgtgggtcgggc
atatctggaatcctttgtgatgagtgctcccctgggtatgatgccacatttccagcctgc
aagatctgccactcatgtgcctccttgtgggcagaagagatcactgatgttcagaaagct
gctcggaggatgaagacctttatccctcagcctaacggcaccttgcagcaaacaatcagc
agccaacaacagcgcatactagacggatactttacagtgggtagcctggtaaaaatcatg
ctgatgttcctccctaggctgcaaaagctggataaactatgtgtacagataaggatgctg
aaggactccattgacacaaacactattctgattgacccatctgctctgctgtttatcgag
atccacggcacaaagcagcagtctaagaatctgttgaacaacctaaaagataatctcatc
aaaggcaaagatgaagagagagatgtcaagaaagagctgctcctgcaaatcctgaagcat
cataagtcctttatgctaaatgaggaggggctgagaaacttcagcacaactctggagaac
tccatggatacaaggcatgaggttttacgcaaactgagtaggtgcagccggattggagcc
ctggcaaagttggagcagaaggtcaaggaccttagtgtggtcaccttcaatcataaggct
tccaaaagaccatgtctgaaaaactgctctgtagatggtgctgctccatgtgtccttctt
ctgggaggtccagactgtgatggaggagtttctatcagtcatattgctttaagtactttg
gagaaagcaaaggaccagctcattggatttcaagccaaactgcaaagggcagagaaaaag
atctacaatgctctaaaactggctcaaacaatcaaagaccatgcaaaaaccctgcagact
caactcatcagcaatgctgtaacactgcaaagaaagaagactcacaccagggatctcttt
cagcgagccaagctcttgattacagacaacactgtttctccagatgacatcaaagaaatg
gcgacagatgtcttgagcatccatctttccctgtcacctgatgagatctggtcagtgatt
aacgtcagcaataatctgacaagcaagtctggcaaagttcagtacaacttgactgacctg
aaaaatcaagctgcagttggacaagggctgctacataaagtgcaatacagcaggcagcag
actgcgggcatggacattaaaaacatcaacatagatattttcaaggtgcacagaagcaat
tccaggaccagtgaaaacctgaccaaagccactggagaccaaaacaacgccgacagccat
atgaaggatgttgaaagcaaactggacagcattaagtcaaaactggagaaggcacctgat
ctgtctactgaaataaaaaatgtgaaggacaaaactgagcagaccaactttttagtcaca
gaggcaacagatgctgcagaagatggatttaatgatattgttgatgcacaggggacattt
cgtcttgtgatgaagctcttttgggctttcaaaaaagagacctcagctctgaaattagct
gcaaacactccacatcaactgactaaaattgcaaaaggagcaaaggactttgagaaagaa
gttgaggacaagttcaaacagacgcaagatgtggagcagagaatcaagtggctgctgaac
aggaagaaacagaaagaacttcaactgttccagttgttgaagatagtatattctcttcga
caagacattttgtcgcgggtggtttcctacagcacctgctcgtcataa

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