Oryzias melastigma (Indian medaka): 112151861
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Entry
112151861 CDS
T07439
Symbol
ckap5
Name
(RefSeq) cytoskeleton-associated protein 5 isoform X1
KO
K16803
cytoskeleton-associated protein 5
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112151861 (ckap5)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112151861 (ckap5)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
112151861 (ckap5)
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
XMAP215
112151861 (ckap5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XMAP215_CLASP_TOG
CLASP_N
CEP104-like_TOG
HEAT
HEAT_2
HEAT_EF3_N
TOR1L1_N
HEAT_ECM29
HEAT_EZ
TAN
DUF1071
Motif
Other DBs
NCBI-GeneID:
112151861
NCBI-ProteinID:
XP_024136732
Ensembl:
ENSOMEG00000017514
LinkDB
All DBs
Position
LG6:28787826..28818082
Genome browser
AA seq
2039 aa
AA seq
DB search
MADDSEWMKLPIDQKCEHKVWKARLNGYEEALKLFQRIEDTKSPEWGKYLGLIKKFVTDS
NAVAQLKGLEAALAFVENAHVASRTTGEVVSGVVTKVFNQPKARAKELGMDICLMYIEIE
KAEVVQDELIKGLDNKNPKIVVACLETLRKALSEFGSKIVTLKPVVKILPKQFESREKAV
RDEAKLLAVEIYRWIRDALRPPLQNINSVQLKELEEEWVKLPSAPPKQSRFLRSQQDLKA
KFEQQQVQGGEHSDGDDEEETAAAVDPYELLEPVEILSKLPKDFYEKIEAKKWQERKEAL
EAVETLTKNPKLENGDYGDLVRALKKVVGKDANVMLVSLAAKCLAGLASGLRKKFGTYAG
QVVPTILEKFKEKKLQVVQALQEAIDAVFLTTTLQNLSEDILAVMDNKNPSIKQQASLFL
ARSFRHCTQATLPKSVLKPFCAALIKQVNDSAPEVRDAAFEALGTAMKVVGEKAVNPFLA
DLDKLKLDKIKESADKVELPGGKKSAGGAPAEKKPAAKAAPPEAPKASAPPKKSAAAASK
PSSGAPKKGKPASGGKAKKTSDGKEVAEPELTMEVCEELAAGVLPQYCLQVLDSANWKER
LASMEEFQKAVETMDKVAMPCQALVRMLAKKPGWKETNFQVMQMKLHIVALVAQRGQFSK
TSASVVLEGLVDKVGDVKCGGNAKEGLTAIGEACSLPWTAEQVVSLAFAQKNPKNQAEAL
NWLANAMKEFGFAGINVKAFINNVKTALGATNPGVRTAAIALLGVMHLYMGAPLRMFFED
EKPALLSQIDAEFEKMQGQTPPAPTRFTRKSASAEDEGDEGEEHEEDGGGGGQDVMDLLP
RSDIGDKISSDLVSKIGDKNWKIRKEGLDEAAAIISEAKFIKANIGELPLALKGRLTDSN
KILVQQTLSILQQLAAAMGPGLKQHVKSLGIPIITVLGDSKANVRAAALTTLQAWVDQTG
MKDWLEGEDLSEELKRENPFLRQEVLGWLAEKLPTMRTVPGDLMLCIPQLYACLEDRNGD
VRKKAQDALPTFMMHLGYEKMNKATGKLKPASKDQVVAMLEKARAVMPAKPAAPAKAGGG
KASADLGGPASVPAEEVADGKPEVKKIRGGAAAKKPPPEESPPLKEKEVNGSKKPPSKGK
AAASTQQAASTKKPAAKGQKEDDRSGPIFIFVPNAKEQRIKEEKQLKILKWNFITPRDEY
VEQLKTQMSTCLAKWLQEELFHLDFQRHVKAIGVMIERLESESEAVIGCLDLILKWFTLR
FFDTNTTVLMKALEFLKLLFIMLNNENYHLTEYEANSFIPYLILKVGESKDGVRKDVRAI
LTMLCKVYPASKVFPFLMEGTKSKNSKQRSECLEELGCLIEGYGMNVCQPTPAKSLKEIA
VHIGDRDTSVRNAALNTVVAVYNVCGDQVYKLIGNLSEKDMSMLEERIKRSAKKAPAKQS
APEKTQRDHPANPNATFSRKPAQEDPNKLKIMYRTYKIQSRQQHNEPSHPSIPKEFQLDL
DMIEEDMIREEYKLPDLIQHNLDELLEPIIIPKLMTRNISLHFDDLHNSTASTINYVISQ
VASGDINTSIQALAQIDEVLRQEDKADAMSGHIDQLLIATIMQLRLINSTHLADDRVDKK
DVIKLYSCIMGSLLSLFSMESLAREASMGILKDLMHGLIMLMLDSRVEDIEEGTQVIRSV
NLLVIRVLEKSDPTNLISALLVLLQDSLVSTAGSHRISDLVMKCLWRVIRFLPETIHNIN
LDRILLDVHNFMKVFPKEKLKQHKSDLPHRTLKTLLHSLCKLTGAKILDHLSMIENRNES
ELEAHLRRVVKHTGNLSGVKSDRGNEKSGLRTEDRMSKAKVSDILTEIFKKIGSKENTKE
GLTELYEYKLKYSDADLEPFLKNTTQVFQSYVERGLRMIESEREGKVRIQTVIPQNSCDS
VLSSNEELRPAAYYYERLKILKQRHGLENTGRQAGLNSSEEEPQQQQQQPTISLMSKPAV
VSSTDMLHSKLSQLKESREQYQQERSALSPTRAHTRSASPAGNLDDLKKRLERIKSKLQ
NT seq
6120 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgatagcgagtggatgaagcttcccatcgaccagaaatgtgaacataaggtg
tggaaagctcgactgaacggttatgaagaagccctgaagctgttccagaggatagaagac
acaaagagtccagagtgggggaagtatctgggcttgataaagaagtttgtcacagactcc
aacgccgttgctcagcttaaaggcctggaggccgctctggcctttgttgagaatgctcat
gttgctagcaggacgacgggtgaggtggtttcaggcgtcgtaaccaaagtgttcaaccag
cctaaggcccgagccaaagagctcggcatggacatctgtctgatgtacatcgagatagaa
aaagccgaggtggttcaggacgaactcatcaaaggactcgacaacaaaaaccccaaaatt
gtggtggcgtgcttagaaacgctcaggaaagctctcagcgagtttggatccaagatagtg
acgctgaagccagtggtaaagattttacccaaacagttcgagtccagagagaaggcagtg
agagatgaagccaagcttctcgctgtggaaatctacaggtggatcagagatgctctgaga
ccgccgcttcagaacatcaactctgtccagctgaaagaattggaggaagagtgggtcaaa
ctgccttcagctccccccaagcagagcaggttcctgcgctctcagcaggacctgaaagca
aagtttgagcagcaacaagtccagggaggagagcactctgatggagacgatgaagaggaa
actgcagcagcagtggatccgtacgagctcctggaacctgtagagattctctcaaagttg
cccaaagacttctatgagaagattgaagctaaaaaatggcaagaaagaaaagaagctctg
gaagctgtagagactctgaccaagaatcccaaactagagaatggagactatggagatctg
gtcagagccctgaagaaggtggttggcaaagatgccaacgtgatgctggtgtcattagct
gctaaatgtctggctggattggctagcggcctcaggaagaagtttggcacatatgcagga
caagtggttccaaccattttggagaagtttaaagagaagaagctccaggtggtgcaggct
ctgcaggaggcaatcgacgcagtcttcctcaccacaactctacagaacctttcagaggac
atcctggctgtgatggacaacaagaacccgtccatcaagcagcaggcttccctgtttctg
gcccgctctttcagacactgcacgcaagccacgctgcccaagagtgtcctcaagcctttc
tgtgccgctctcatcaagcaagtgaatgactccgcccctgaggtccgtgacgctgccttt
gaagctctggggacagccatgaaggtggtgggagagaaagctgtgaaccccttcctggct
gacttggataaactcaaactggataagataaaagagagcgccgataaagtagagcttcct
ggagggaagaaaagtgcaggaggagcaccagcggaaaagaaacctgcagccaaagccgct
cctcctgaagctcctaaagcttctgctccacctaagaaaagtgctgcagcagccagcaag
ccatcatctggggcacccaaaaaaggcaaaccagcttctggagggaaagcaaagaaaacg
tctgatggcaaagaggtggcggagccggagctaacgatggaggtctgtgaggagctggct
gccggggtccttcctcaatactgtctgcaagtgctggattcggccaactggaaggagaga
ctggccagcatggaggagtttcagaaggctgtggagaccatggataaggtggcgatgccg
tgtcaggctctggtcaggatgctggctaaaaaaccaggatggaaggagacaaacttccag
gtgatgcagatgaagctgcatatagtggccctggtcgctcagaggggccagttctcaaag
acctctgccagcgtggttttggaaggactggtggataaggtcggagatgtcaagtgtggc
gggaacgcaaaggaagggctgacggcgatcggagaggcctgctcacttccctggacagct
gaacaggttgtttctttggcatttgcacagaagaacccaaaaaaccaggcagaggcgctc
aactggctggccaatgcaatgaaggagtttggctttgcggggattaacgtaaaagctttc
ataaacaacgtgaagactgctctgggagcaacgaaccctggcgtgcgaacagcggccatc
gctctgctaggggtcatgcacctgtacatgggagcgccgctccggatgttctttgaggat
gagaagccggctcttctttctcaaatagatgcagagtttgagaagatgcagggtcagact
cctccagctccaaccagattcaccagaaagtcggcatcggcagaagatgagggcgacgaa
ggggaggagcacgaggaagatggaggaggaggaggccaggacgtaatggacttactacct
cgatcagatatcggtgacaagatctcttctgatttggtctctaaaatcggggacaagaac
tggaagatcagaaaggagggcctggatgaggctgcagccataatctccgaggccaagttc
atcaaagcgaatattggagagctgcctttggccctgaaaggccgcctcaccgactccaat
aaaatcctggtgcagcagactttgagtattttgcagcagcttgctgcagccatgggacct
ggactcaagcagcacgtcaaaagtctggggatccccatcatcactgttctgggagacagt
aaggccaatgtgagggcagctgccctgaccaccctgcaagcctgggtggatcagactggg
atgaaagactggctggagggggaggatctgtcagaggagctgaagagggagaatcctttc
ttgcgacaggaggtgctcggctggttggctgagaagctccccactatgaggacggtcccc
ggcgacctgatgctgtgtattcctcagctctacgcctgcttggaggacagaaatggagat
gtgagaaagaaggctcaggatgctttgcccaccttcatgatgcatctgggctatgaaaag
atgaacaaagccactgggaaactgaagcccgcgtctaaggatcaagtggtcgccatgttg
gaaaaagctcgagcagtgatgccagctaaacctgcagcaccagctaaagcaggaggaggg
aaagcatctgcggacctcggcgggcctgcatcagtacctgctgaagaagtggctgatggg
aaacctgaagtaaaaaaaatcagaggaggagctgctgccaagaagcccccccctgaggaa
tctccccctctcaaggagaaggaggttaatggtagtaaaaagcccccgagcaaagggaag
gctgctgctagcacccaacaggctgcaagcaccaagaaacctgcagctaaaggccagaag
gaagatgatcggtccgggccgatcttcatctttgttccaaatgcaaaggagcagcgaatc
aaagaagaaaagcagctaaagatcctaaagtggaacttcatcactcctcgggacgagtac
gtggagcagctgaaaactcagatgtccacatgcttggcaaagtggcttcaagaggagctg
tttcacttggacttccagagacacgtgaaggccatcggagtcatgattgagcggttggaa
agcgagagcgaagccgtcatcggctgtctggatctgatcctgaagtggttcaccctacgc
ttctttgacacaaacactacagtcctcatgaaggcgctggagttcttgaagctgctcttc
atcatgttaaacaacgaaaactaccacctgacggagtacgaggccaactctttcatcccg
tatctcatcctgaaggttggggagtcgaaggatggggtgcgcaaagatgtccgggccatc
ctcaccatgctctgcaaagtttacccagcatcgaaagtcttccctttccttatggaggga
accaagtccaagaactccaagcagagatctgaatgtctagaggagttgggttgcctcata
gagggttacgggatgaatgtctgccagccgactcccgccaaatccttgaaggagattgcc
gtgcacatcggagatcgcgatacgtccgtacgcaacgccgccctcaacaccgtggtggcc
gtgtacaacgtctgcggggaccaggtctacaagctgatcgggaatctttcagaaaaagac
atgagcatgctggaggagaggatcaagaggtcggccaagaaggctccagctaagcagagc
gccccagagaaaacgcagcgagatcatcctgcaaaccccaacgccaccttctcccgcaag
ccggcgcaggaagaccccaacaagctcaaaataatgtatcgcacatataagattcagtcc
cgtcagcagcacaacgagccctctcatccctccatccccaaggagttccagttggacctg
gacatgatcgaggaggacatgatcagagaggagtacaagctgccagacctgatccagcac
aacctggatgagctgctggagcctatcataatccccaaactcatgacccgcaacatatcg
ctgcactttgacgatcttcacaacagcacagcctccaccatcaactatgtcatatcccag
gtggcgagtggcgacatcaacacgagcatacaggcattggcacagattgacgaagttctg
cgacaggaggacaaagcggacgccatgtctggacacatcgaccagctgctcatcgccacc
attatgcaactgaggctcatcaacagcacacacctggctgacgaccgcgtggacaagaaa
gacgtgatcaaactgtacagctgcatcatgggaagcctgctgtctctcttttcaatggag
tctctggccagagaggcgtccatgggcatcctgaaggacctcatgcacggtctgatcatg
ctcatgctggacagcagagtggaggacattgaagaaggaacgcaggtcatcaggtctgtc
aacttgttggtgatcagagtcctggagaagtcggatccaaccaacctgatcagtgcccta
ctggttctccttcaagactccttggtgtccacagccggttcccacagaatctctgacctg
gtcatgaagtgtctgtggagggtgatccgcttcctgccggagaccattcacaacatcaac
ctggatcggatcctgctggacgttcataacttcatgaaagtgttccccaaagagaaactc
aagcagcacaagagcgaccttccacatcggaccctcaagacgcttttacactctctgtgc
aagctcaccggggccaagatcctggaccatctgtccatgatcgaaaaccggaacgagtcg
gagctggaggcccatctgaggcgagtcgtcaaacacactggaaacctgtctggagtgaag
agcgaccgaggcaacgagaagagcgggctgcgcacggaggaccgcatgtcaaaggccaag
gtcagcgatatcctgacagagatcttcaaaaagatcggatccaaggagaacaccaaagag
ggtttgacagagttgtacgagtacaagctgaagtactcggatgccgacttggagcctttc
ctgaagaacacgacccaggttttccagagctacgtggagcgaggcctgcgcatgatcgag
tctgagcgtgagggaaaagtccgcattcagacagtgattccacagaacagctgcgattca
gttctgagcagcaatgaggagctgaggccggccgcttactactacgagagactgaagatc
ctcaaacagaggcacggcctggaaaacaccggcagacaggctggtctgaacagcagcgag
gaagagccccagcagcagcagcagcagccgaccatctcgctgatgtccaagcccgccgtc
gtgtcgtccacagacatgctgcacagcaagctgtcgcagctgaaggagtcccgcgagcag
taccagcaggagcgcagcgcgctctcgcccacccgcgcacacacacgctcggcctcgccc
gcgggcaacctggacgacctgaagaaacgcctggagcggataaagagcaagctgcagtga
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integrated database retrieval system
