Oryzias melastigma (Indian medaka): 112151951
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Entry
112151951 CDS
T07439
Symbol
ticrr
Name
(RefSeq) treslin isoform X1
KO
K26117
Treslin
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
112151951 (ticrr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oml03032
]
112151951 (ticrr)
DNA replication proteins [BR:
oml03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
112151951 (ticrr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Treslin_STD
Treslin_M
Treslin_N
Motif
Other DBs
NCBI-GeneID:
112151951
NCBI-ProteinID:
XP_024136868
Ensembl:
ENSOMEG00000003878
LinkDB
All DBs
Position
LG6:4586893..4609624
Genome browser
AA seq
1782 aa
AA seq
DB search
MASHNIVFLIDVDLEDHESDRQVNVKIDFIKRGILQVLLHFGYKLGLEKLRWGYKFFQSK
TRRPSNTLSRASDFKELRQKTFEDFEQEFETRFDLRDKLCSSRQKQQPCQLVQNAVRETL
LDFQWDRPDITSPTKPSLRPRKSGRAGKPSLPHEDDVSNSGKNVVFVVSQCPTSRAQFLD
YLSCKDDELSSNPAEFIISKNLKDMLLQQQVLLHWIDTRSYNQVVRSEDHLGSDEVSAVL
AQVAGRVIPLVALLDLCCQQKSDSRLVKDGFGLKSSIGYLLSSESLFQQARPSTRGVLRW
DRGNTVQSCGVTVEPVLCRQRIPQEPVDVCVKGVVPYCDASSFTQISTESWVLKEHCSEE
QEAAALQHLLRELSSLGSNMLAEVNVSGLECSAVLSPLSHSTALLTVLQPEIPQHHQLLK
TPAGAAQTSTELPAVVSSVLGVVYDIMNKEEETVNDKMQDQPVPEWAQQEFSHPVTTSLL
EAWFPHSDMSGVSSHLMESFRLLSAVPEQSEEEELQQELIGGLSELYQASVDHVNKRGRK
RGAHCTPVKQRMKTMSRSLQMLNVARLNVKALKNQAEEEQTTTESRTADKPGKRRMSTRG
RSAGQSSVTFTSEAELLTHLKASYDRGVAEKDSSVLEVLQQLVTAVKAFLGAKSNCQGQV
SVFVQKHLLKTSKSIRQLYGAGADTDSKVRECQLQVMLRLELCSLLASEPSDSLDADTMT
EEAAEMLRIISLTKDPVFLSRFLLDEVIPGFLNSVPRDLANIYHNLGTQLPEVLVAVLPA
DFFSDESINKDSISPSVSSSATSASNLVSNGNAGLQDLRSRTANRKRSGMLTRHRSTTES
SQSFRQVEIPKKALKAPKTGSVASDKPAVDLQPQKQEAKEVTKVRRNLFNQEVVPQPKKS
KLSRSQSVSAVEGLKRKRPDETEERHKLLTKKVCDTPVHKQVSSRLLHRQKIGRRSDFSE
DFIVEESPVKPAEELRRSPRIQKFSRRHSNTFYSCSQSRSRNLDRALSSSQLFLTDVKAC
EVNVKTVKSPLRLLFGAAESPGHDQPAGTKTSRTRLPTDSSVFESPNKTPTKSPRCGAAV
IDGYVLGTPCTPKTPESKPSTRTQTSSGAESPAEGSSGLAMTLRSSPFRSPAKTPLDLEM
LSKQSPMKSPLKGILKTPVKTNTDHPSGMGLRSHQAFRTPKKSVTWSPSPQKLKKVENVS
SFKVPESPKTASHSCSGILKTPSKLSSPVLSLTRAIFTTPTKICQVKLVRMPDRAVLTPE
KTSTLSTKLDRTKTPEKDEHFSPPEMSKTASPGQQRMTRSGQTLSPSQKDSASSEGSPSS
LTCTSKGLKKIECKRKPTHSSKLQPVENLVLENINLSSQEETSYSSSFHTDSQEDGSSQG
NSATTDSDSLDIVDAAVVKSQFSGGLKMNISFSRKSSASGGKLESPKHVGTASRGYGFRQ
TPDRQQREAAARLGYSNEFPRFSTPRGSKRLAQPKESPLTYQVELEMQTSGLPKLKIKRT
DFPSDRSPPVGASKPYFESPLALLPKHKDAGCVSPSLCAHATPAKSTPLKGVGVQTFICQ
SYTPTRLPAAAASPKAVADVIPLTPSPQCVGRVPPDNLNSWPRRKRPNIETKERQLKADP
QLDELLEEAELGVGRLQDMEDTDEPPDSNAEETAFNSKPMVPCGAALSPKEDLYWTEKLT
EQNNPQGTDSDVFWFHENGDFTPTVETPPSSKKIKPVTASGILALTQSPLLFKSRAASTH
LRRSNSKQEEDAEADGVDFSGSSPPVRHSRAGKTYSRKRLIH
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacacaacattgtttttctgattgacgtggacttggaagaccacgagtcagac
cgtcaagtgaatgtcaagatcgatttcataaaacgaggaatactgcaggttttgttgcat
tttggatacaaactcgggttggagaagttgcgttggggatacaagttctttcaatccaag
acgaggcgtccttccaacacgttatcgagggcttcggattttaaagagcttcgccaaaaa
acctttgaggactttgagcaagagttcgaaacgaggttcgacttgagggataaattgtgt
tcaagccgtcagaagcagcaaccctgtcagttggtccaaaacgctgtgagagaaacgctc
ctggacttccagtgggacagaccggacatcacttctccaaccaaaccgtccctgaggccc
aggaagtcgggtcgtgctgggaagcccagcctgccacacgaagatgacgtttcaaacagc
gggaaaaatgttgtttttgtcgtctcacaatgcccaacatccagggctcagtttttggat
tatttgtcttgtaaagacgacgagctgtcatcaaaccccgcagagttcatcatctctaaa
aaccttaaagacatgttgctccagcagcaagttcttcttcactggattgacaccagatcc
tataatcaggttgtaagaagtgaggaccaccttggctctgatgaagtatctgcggtcctc
gctcaggtggctggcagagtaatccctctcgttgctcttttggatctctgctgtcaacag
aagtcagactccagacttgtaaaggatggctttggactgaagtccagtattggatacctg
ctgtcttctgaaagcctcttccagcaagctcgtccttccacaagaggtgtcctacgatgg
gatcgagggaacacagtgcagagttgtggagttacagtggagccagtgctatgcaggcag
aggattccccaggagcctgttgatgtgtgcgtcaaaggagtggtgccttactgcgacgcc
tcgtcattcacacagatctccacagagtcatgggtccttaaggaacactgcagcgaggaa
caggaagctgctgccctgcagcatcttctgagggaactgtcttctcttggttccaacatg
cttgctgaggtgaatgtcagtggactggagtgttcggctgtcctgtctccactgtcacac
tccacagctctgctcactgtccttcagcctgaaatccctcagcaccatcagctcctgaag
actcctgctggagcagctcaaacctccacggagctgccagctgtagtgagcagtgttctg
ggagtcgtttatgacatcatgaacaaggaggaagagactgtcaatgataaaatgcaagat
cagccagtccctgagtgggctcagcaagaattcagccacccagtgacgacgagcttgttg
gaggcctggttccctcactcagacatgtctggagtcagctctcatttaatggagtctttc
aggttgctgagtgccgtgccagagcagagtgaagaagaagagcttcaacaagagctgatc
ggtggtctttctgaactgtatcaagcatctgttgaccacgtaaataagagagggaggaaa
cgtggcgcccactgcacaccggtgaagcagaggatgaagacgatgagccgttctttgcag
atgctgaatgtggctcgtctgaatgtaaaagccctgaagaaccaggcagaggaggagcag
accaccactgagagcagaaccgcagacaaaccgggaaagagacggatgagcactcgagga
agatctgcagggcagagttctgtcactttcactagtgaggccgagctgctgacccacctg
aaggccagttatgaccggggcgtggcagagaaagactcgtctgtgctggaagtccttcaa
cagctggtgactgctgtgaaagcttttctaggggcaaagtcaaactgtcagggacaggtc
tccgtgtttgttcagaagcatctcctaaaaacaagcaaatcaatcagacagctttatgga
gccggtgctgacactgacagcaaagtcagagagtgccaacttcaagtgatgctgaggctg
gagctgtgcagtcttttggcttcagagccgtctgactcactggatgctgatacgatgacg
gaggaggctgcagagatgcttaggattatctctcttactaaagatccagttttcctatca
agatttctactagatgaagtcattcctgggtttttgaattcagttcccagagatcttgca
aacatctaccacaacttgggaactcagttgcctgaagttttggtggctgttttgccggct
gacttcttcagcgatgaatccatcaacaaggacagcatctctccctccgtctcctcatct
gccacgtcagcctccaacttggtgtctaacggcaacgccggtctgcaggacctgagaagt
cgcacagcaaataggaaaaggagcgggatgttgactcgtcatcgcagtacgactgaatca
tcacagagttttcgccaagttgagattcccaagaaggctttaaaagcacccaaaacaggc
agtgttgcttcagacaaacctgcagtggacctccagcctcagaaacaagaagcaaaagaa
gtgaccaaagttcgaagaaatcttttcaaccaagaagttgttcctcagccaaaaaagtcc
aaactgtcccggagccagtctgtgtctgctgtggaaggactgaagcgcaagcggcccgat
gagactgaagagagacacaaacttcttacaaagaaagtttgtgacacccccgtccacaag
caggtgtcaagtcgacttcttcatcgacaaaaaataggaaggagatctgacttctctgaa
gattttatcgtggaagaatctcctgtaaaaccagcagaagagctcagaaggagtccaagg
atccagaagttttccagaagacactccaacaccttctactcgtgttctcagtctcgctct
cgtaacctggacagagctctttcatcgtcgcagctgtttctgactgatgtcaaagcctgt
gaggttaatgtgaaaacagtcaagtctcctctgcgacttctctttggagctgctgaatct
ccgggccatgatcagcctgcaggaaccaaaaccagcagaactcgacttcccacagactcc
agtgtttttgagagtccaaacaaaactcctaccaagtcaccgagatgtggagctgctgtt
attgatggttatgttctcggtactccttgtactccaaaaacacccgaaagtaaaccttca
accaggacacaaacatcctcaggcgcagagtctccagctgaaggcagctctggactggct
atgactttgaggagcagtcctttcagatctccagctaaaacacctctagatctagagatg
ctctccaagcagagccccatgaaaagccctttgaaagggatcctcaagactccagtcaaa
acgaacacagaccacccctctggaatgggtctgcgcagccatcaggctttcaggactcct
aagaaaagcgtcacctggtctccttctcctcaaaaactgaaaaaagttgaaaatgtttcg
tcctttaaagtcccagagtcgcctaaaactgcatctcacagttgttcagggattctgaaa
acacccagcaagctcagcagtcctgtcctgagcctaacaagagccattttcacaacacca
accaaaatctgtcaggttaaactagtgaggatgcctgaccgtgctgtcctgaccccagag
aaaacttcaacactatctacaaaacttgacaggaccaaaacacccgagaaagacgagcat
tttagtcctccagaaatgtcaaagacggccagtcctggacagcagaggatgactagatca
ggtcaaactctttctccatcacaaaaggattctgcttcgtctgagggttcaccttcttca
ctcacatgtacctcaaaggggttgaagaaaatagaatgtaaaagaaaaccgacgcacagt
tcaaagctacaacctgttgagaacttggttttggagaacatcaacttgagttcacaagaa
gagacctcttattcgtctagtttccacacagactcgcaggaagacggttcttctcaaggg
aactctgcaacaactgacagtgatagtctggatattgttgatgctgcagttgtaaagtct
caattcagcggagggctcaagatgaacattagcttttcgagaaagtcttctgcgtctgga
ggaaaactagaatcccccaaacatgttggaacagccagcagaggctatggcttcagacag
actccagaccgccagcagagagaggccgctgctcgtttaggctacagcaatgagttccct
cgattctcaacccctagaggttccaaaagactcgctcagccaaaggagagtcctctaacc
tatcaagtagagctggaaatgcaaacatcaggccttcccaaactcaaaatcaagcgcaca
gactttccctcagatagaagtccacctgtaggagcttcaaaaccttactttgagagcccc
ctggctctgttacccaaacacaaagatgctggttgtgtctcgccgtcgctctgcgctcac
gccacaccagccaagagcacgcctctaaagggcgttggcgtgcagacgttcatctgccag
tcttacaccccaacccgcctccccgctgcagcagcgtccccaaaagccgtggcagacgtc
attcccctcactccttccccccagtgtgtggggagagtccctcccgacaatctgaacagc
tggccgcgcagaaagagacccaacatcgaaaccaaagagcggcagctgaaggccgaccct
cagctggacgagctgctggaagaggcggagcttggcgttggcagattgcaggacatggag
gacactgatgaacctcctgacagtaatgcagaggaaacggcattcaactccaaaccaatg
gttccctgtggagctgctctgtcaccaaaggaggatttgtactggacagaaaaactgaca
gagcagaacaaccctcaggggacggactctgacgttttctggttccacgaaaatggagat
ttcacaccaactgtagagactcctcccagttcaaagaagatcaagccggtgacagccagc
ggcattttggccctcactcagtccccgctgttgttcaagagcagagcagcctccactcat
ctgaggagatccaactctaaacaagaagaggacgctgaagctgatggagtggacttctct
ggctccagtccgccagtcagacactcaagagcaggaaagacctacagtagaaagagactc
attcattga
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