Oryzias melastigma (Indian medaka): 112151980
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Entry
112151980 CDS
T07439
Symbol
pparab
Name
(RefSeq) peroxisome proliferator-activated receptor alpha b
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03320
PPAR signaling pathway
oml04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
112151980 (pparab)
03320 PPAR signaling pathway
112151980 (pparab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112151980 (pparab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oml03310
]
112151980 (pparab)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
112151980 (pparab)
Nuclear receptors [BR:
oml03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
112151980 (pparab)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
112151980
NCBI-ProteinID:
XP_024136928
Ensembl:
ENSOMEG00000007570
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Position
LG6:12038420..12079611
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AA seq
469 aa
AA seq
DB search
MVDMESHYHPPSPLEDSVLESSLCADDDLMGSMDDLQDISQSIDDDALSSFDVPEYQSSS
NGSEGSTVIDALTPASSPSSVVYGLASSQEEFSSSSSSLTLECRVCADRASGYHYGVHAC
EGCKGFFRRTIRLKLEYDKCERRCKIQKKNRNKCQYCRFQKCLAVGMSHNAIRFGRMPQS
EKLKLKAEMVIGDREVEDPQLADQKSLAKQIYDAYLKNFNMNKAKARTILTGKTSTPPFV
IHDMETLQLAEQTLVAKMVGSAGALKDREAEVRIFHCCQCTSVETVTELTEFAKSVPGFS
ALDLNDQVTLLKYGVYEALFALLASSMNKDGLLVAYGSGFITREFLKSLRRPFSDMMEPK
FQFAMKFNALELDDSDLALFVATIICCGDRPGLVNVAHIDAMQENIVKVLRLHLLGNHPD
DAFLFPKLLQKLADLRQLVTEHAQLVQEIKKTEDTSLHPLLQEIYRDMY
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacatggagagccactaccaccctccatcccctttggaggactcggtgctagag
agctccttgtgtgcggacgatgacctcatgggtagcatggatgacctccaggacatttcc
cagtccattgatgacgatgccctgagctcctttgacgtcccagagtaccagtcgtccagc
aacggttcagagggttccactgtcatagatgccctgacgccagcgtccagcccgtcatct
gtggtttatggtttggcatcgagccaggaggagttctcatcttcctcctcatccctcact
ctcgagtgtcgggtgtgtgctgaccgcgcatcaggctaccactatggggttcatgcctgc
gagggctgcaagggtttctttaggcggaccatccgcctgaagctggagtacgacaagtgt
gagcgtcgctgtaagatccaaaaaaagaaccgcaacaagtgccaatactgccgcttccaa
aagtgcctggcggtgggcatgtcccacaatgccatccggttcggcaggatgcctcagtcg
gagaagctgaagctgaaggcggagatggtgataggggatcgggaggtggaggatccccag
ctggctgatcagaaaagtctagcaaagcagatttatgacgcctacctcaagaacttcaac
atgaacaaggccaaggctcggaccattctcacgggcaagaccagcacccctcctttcgtc
attcacgacatggagacgcttcagctggcagagcagacgctggtggccaagatggtgggc
tccgcgggcgccctgaaagatcgcgaggccgaggtccgtattttccactgctgccagtgc
acgtcggtggagaccgtcacggagctcacggagtttgccaaatccgtaccgggcttctcc
gccctggaccttaacgaccaggtgactcttttgaagtacggcgtgtacgaagccctcttt
gccctgctggcctccagcatgaacaaggacgggctgctcgtggcgtacggctcgggcttc
atcacccgggagttcctgaaaagcctgcgccgaccgttcagcgacatgatggagccgaaa
ttccagtttgccatgaagtttaacgcgctggagctggacgacagtgacctggctctgttc
gtcgccaccatcatctgctgtggagaccggcctggcctggtgaatgtggcacacatagat
gcaatgcaggagaacatcgtgaaggtcctacggctccacctgctgggcaaccaccccgac
gacgccttcctgttccccaagctgctgcagaaactggctgacctccggcagctggtcacg
gagcacgctcagctggtgcaagagatcaaaaagacagaggacacgtcactgcacccactg
ctacaggagatctaccgagacatgtactga
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