Oryzias melastigma (Indian medaka): 112152002
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Entry
112152002 CDS
T07439
Symbol
clmpb
Name
(RefSeq) CXADR-like membrane protein
KO
K06789
adipocyte-specific adhesion molecule
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
112152002 (clmpb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112152002 (clmpb)
Cell adhesion molecules [BR:
oml04515
]
Immunoglobulin superfamily
CTX family
112152002 (clmpb)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
ig
Ig_3
I-set
Ig_2
Stevor
Syndecan
Ig_PDGFR_d4
TM_ErbB1
DUF5957
DUF6556
Ig_VEGFR-1-like_5th
Ig_CD22
Ig_C17orf99
EphA2_TM
Ctr
Vma12
Vpu
YxzE
Adeno_E3_CR2
FixQ
Motif
Other DBs
NCBI-GeneID:
112152002
NCBI-ProteinID:
XP_024136971
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Position
LG13:complement(28343392..28451998)
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AA seq
384 aa
AA seq
DB search
MSALFGSLFLVLSSLLSARAQTEMKKVVGDNATLPCHHQFPSSSSLDIEWLLQKPNSKQK
VIITFFGGEVYTEATGSEANRLSFAGEYLGGDASLLISDLLLTDSGEYYCKVKTGGKYHW
SQVNLIVLVKPSKPRCWMDGKLLEGKDVKLGCESSDGSDPISYKWERVLDKGKSLGKLPN
LALIDLKNPEIVTLRNLTMDSTGVYRCTASNDVGEENCTIEVTMQHVKDVGMVAGAVVGI
LLAVIIVIITIWLVFRKKEKKKYEEEETPNEIREDAEAPKAKLVKPNSLSSSRSGSSRSG
ASSTQSMVHNSAQRGHRPRPPAVAALKENGQPPGFPQSPPAYTTVVAPKTPEPPATPKYN
SRNMSGPTPPTLMVPAQTKAFQTV
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgctatttggctctttgtttctggtcctatccagtctgctgtcagcgcgggct
cagacggagatgaagaaggtggttggggacaacgccacgttaccctgccaccaccagttc
ccatcgtccagctcgcttgacatcgagtggctgttgcagaaaccaaattccaaacagaaa
gtgattataaccttcttcgggggggaagtgtacactgaggccacaggcagcgaggccaac
cgtctgtcttttgctggggagtatctgggcggagacgcctccctgctgatcagtgacctg
ctgctgaccgactccggggagtactactgtaaagtcaagaccggtgggaagtaccactgg
agccaggtcaacctcattgtgctcgtaaagccctcgaagccgagatgctggatggatggc
aaactcctggaaggaaaggatgtcaagctgggctgtgaatccagcgatggttcagacccc
attagctacaagtgggagcgtgtcctggacaaaggcaaaagtctgggcaagttgccaaac
cttgcactgatagatctcaaaaatccggaaattgtcaccctgaggaatctcactatggac
agcacaggcgtctacaggtgcacagcgagcaacgacgtcggcgaggaaaactgcaccatc
gaggtcaccatgcagcatgtgaaggatgtagggatggtcgcaggtgcagtggtggggata
ttactcgccgtcattattgtcatcatcaccatctggctcgtcttccgcaagaaagaaaag
aagaagtacgaggaggaggagactcccaatgagatcagggaggacgcggaagcccccaag
gccaagctggtgaagccaaactccctgtcctcatcacgatctggtagctcacgttccggt
gcttcctccacccagtccatggtgcacaacagtgcccagcgtggtcaccgccctcgccca
cccgctgtagcagccctcaaggaaaacggacaacctccaggcttccctcagtcccctcca
gcctacaccacagtggtggcccccaagacccccgaaccccctgccactcccaaatacaac
tccaggaacatgtcagggcccacacccccaacccttatggtccccgcccagaccaaggcg
tttcagactgtgtag
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