Oryzias melastigma (Indian medaka): 112152025
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Entry
112152025 CDS
T07439
Symbol
barhl2
Name
(RefSeq) barH-like 2 homeobox protein
KO
K09360
BarH-like
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112152025 (barhl2)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
112152025 (barhl2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7645
Motif
Other DBs
NCBI-GeneID:
112152025
NCBI-ProteinID:
XP_024137014
Ensembl:
ENSOMEG00000008466
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All DBs
Position
LG6:12693237..12697882
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AA seq
362 aa
AA seq
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MEASSGSSFGIDTILSSASNSGNPALMNGDFRLGDSRTADFRSQATPSPCSEIDTVGTGP
SSPISVTMEHAADAHLVQDSLQQHHHHHQPQSLPLSPQQQPQLAGAGCAPRTATSSFLIK
DILGDSKPLAACAPYSTTVSSPHHTPKAESATAPDVFRPKLEQDENRSKLDKRDEIPSDM
KCNGTKEEGDREISSSRDSPPVRTKKPRKARTAFTDHQLNQLERSFERQKYLSVQDRMDL
AAALNLTDTQVKTWYQNRRTKWKRQTAVGLELLAEAGNYSALQRMFPSPYFYHPSLLGTV
DGTTAAAAAAAMYSSMYRTPSAPHPTLQRPLVPRVLIHGLGPGGQPALNPLSNPMPGTPH
PR
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgtccagcgggtccagttttgggatagacacgattttatccagcgcctcaaac
tctggtaaccccgcgctcatgaacggagatttccgcctcggcgacagcaggacagcggat
ttcaggagccaggcaaccccatcgccatgctcggagatagacaccgtgggaacgggcccc
tcgtcccccatctccgtcaccatggagcacgccgccgacgcgcatctggtccaggacagc
cttcagcagcatcaccaccaccaccagccgcagagcctgccgctgtcgccgcagcagcag
ccgcagctcgccggggccggctgcgccccgaggactgccacctcctcctttctaatcaaa
gacattttgggcgacagtaaaccgctggcagcctgcgcaccttacagcaccacagtatcc
tcacctcatcacacccccaaagcggaaagtgccacggctccggacgtcttcaggcccaag
ctggaacaggacgaaaacagaagcaaattggacaaacgggacgaaatccccagcgacatg
aaatgcaacggcaccaaagaagaaggtgaccgggagatctccagcagcagagacagtccg
ccggtacgcacgaaaaaaccgcgcaaagcgcgcacggccttcacggaccaccagcttaac
cagctggagaggagcttcgagcggcagaaatacctcagcgtgcaggatcgcatggacctg
gcggcggctctcaacctgaccgacacgcaagtcaagacctggtaccagaacagacggacg
aagtggaagcggcagacggcggtgggtttggagctcctggctgaggcaggaaactattcg
gccttacagagaatgttcccctcgccctacttctaccacccgagcctgctcggcaccgtg
gacggaaccacggcggccgctgcggccgcggccatgtacagcagcatgtaccggactcca
tccgcgccgcaccccaccctccagagacctctcgtcccccgggtgctcattcacggactc
ggcccgggggggcaaccggcgctaaaccccctgtccaacccaatgcctggcacgccgcac
ccgcggtag
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