Oryzias melastigma (Indian medaka): 112152027
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Entry
112152027 CDS
T07439
Name
(RefSeq) transcriptional enhancer factor TEF-3
KO
K09448
transcriptional enhancer factor
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112152027
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
TEA domain
112152027
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
YBD
TEA
TrbI_Ftype
Motif
Other DBs
NCBI-GeneID:
112152027
NCBI-ProteinID:
XP_024137018
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Position
LG6:complement(<12353290..12390001)
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AA seq
365 aa
AA seq
DB search
MYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKAREIQVKLKVRYDQAAKDKALQSM
ATMSSAQIISPTAFQNKMTLQGLSRPVYSTTGGFWHGTLPGQPGSHEDIKPFSHQSYAMQ
ATGPAPIAGYESTAGLSMSPGAPPWQGRSIASSKLRMLEFSAFLEQPQDPETFNKHLFVH
IGQSNPTYSDPYLESVDVRQIYDKFPEKKGGLKELFDKGPQNAFFLVKFWADLSINLQDD
SNFFYGVSSQYESSENMVITSSTKVCSFGKQVVEKVETEYARFENGRYVFRIHRSPLCEY
MINFIHKLKHLPEKYMMNSVLENFTILQVVTNRDTLETLLCIAYVFEVSTSEHGAQHHIY
RLVKD
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgtacggacggaacgagctgatcgcacggtacatcaaacttcgcacggggaagacacga
accaggaagcaggtatctagtcatatccaggtccttgcccggcgtaaggcccgggagatc
caggtgaagctgaaggtacgctacgaccaagctgccaaagacaaggctctccagagtatg
gccaccatgtcctcagcacagatcatctcacccacagccttccagaacaagatgactctc
cagggcctctctagaccagtttactccactactggtgggttctggcatgggactcttccc
ggacagccaggaagccatgaagacattaagcccttctcccatcagagttatgctatgcaa
gcgactggcccagccccaatagcaggctatgaaagtacagcggggctgtccatgtctcct
ggtgcccccccatggcaaggtagaagtattgccagctccaagctgcgaatgctggagttc
tccgccttcttggagcaacctcaagacccagaaactttcaacaagcatctatttgtgcac
atcggccagtccaacccgacctacagcgacccctatctggagtcggtggacgtcaggcag
atctatgacaaattccctgagaagaaagggggcctcaaggaacttttcgacaaagggccc
cagaatgctttctttcttgtcaagttttgggcggacctgagtataaacttgcaagacgac
agcaacttcttttatggcgtgtccagccagtatgagagctctgagaacatggttatcacc
tcgtccaccaaagtgtgctcctttgggaaacaggttgttgagaaagttgagacggagtac
gcacgtttcgagaacgggcgctacgtgttccggatccacagatccccgttatgtgaatac
atgatcaatttcattcacaagcttaaacatctgccggagaagtacatgatgaacagcgta
ctggaaaacttcaccatcctacaggtggtgactaacagggacacactggagaccctgctg
tgcatagcgtacgtcttcgaggtgtccaccagcgagcacggcgcacagcaccacatttac
aggctagtcaaagactga
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