Oryzias melastigma (Indian medaka): 112152082
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Entry
112152082 CDS
T07439
Symbol
si:ch73-62b13.1
Name
(RefSeq) carbohydrate sulfotransferase 1 isoform X2
KO
K01022
keratan sulfate 6-sulfotransferase 1 [EC:
2.8.2.21
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00533
Glycosaminoglycan biosynthesis - keratan sulfate
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00533 Glycosaminoglycan biosynthesis - keratan sulfate
112152082 (si:ch73-62b13.1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oml01003
]
112152082 (si:ch73-62b13.1)
Enzymes [BR:
oml01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.21 keratan sulfotransferase
112152082 (si:ch73-62b13.1)
Glycosyltransferases [BR:
oml01003
]
Unclassified
Sulfotransferases
112152082 (si:ch73-62b13.1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sulfotransfer_1
Sulfotransfer_3
Motif
Other DBs
NCBI-GeneID:
112152082
NCBI-ProteinID:
XP_024137127
Ensembl:
ENSOMEG00000023153
LinkDB
All DBs
Position
LG6:34379132..34387607
Genome browser
AA seq
432 aa
AA seq
DB search
MREGCRAGGGGRMECSWKTVLLLVCASLGVQYTAIRTLRDSLSGPCQGAYRCHSRRHGEP
LSLCDDGWMSVESPRKHILVFATTRSGSSFTGQLLNQHPEVFYVFEPLYHVQQAFTNSSS
RIRRTLDRRALLGAYRDLLLNLYTCDLHFMENYIRPEPQDHVTSSFFRRSSSHALCSPPV
CLEEEAAASSDLPDESWCPKRCGALNLSLASMSCLSKRLVAVKTVRIPEVGDLRTLTEDP
RLDLKILHLVRDPRAILASRMTAFADQFRAWKIWNVTGRQPRYVDLSQITSTCKDMAASA
ETGLQGPAWLHGRYLLVRYEDLALHPETKATEIYRFVGLEMDQRVRTWISKNTNSNASAQ
ADWNYRYSTSRDSRATAENWRLRLGFDVVRKIQSLCNHTLALLGYKQVQSIAELRNLSTS
LVENKTFQPLTW
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaggatgcagagccggcggtgggggtaggatggagtgctcctggaagacggtg
ctgctgctggtttgtgcgtctctgggggtccagtacacggccatccggaccctgagggac
tcgctgtccgggccgtgtcagggagcctaccgctgccacagcagacgccacggagagcct
ctctccctgtgcgacgacggctggatgtcggtggagtcgccacggaaacacatcctggtg
tttgccaccacgcggagcggctcctccttcaccggacagctcctcaaccagcatccggag
gtcttctacgtctttgagcctctgtaccacgtccagcaggccttcaccaactccagcagc
aggatacgccgcacgctggaccgccgcgccctgctgggggcctacagggaccttctgctc
aacctctacacgtgtgaccttcacttcatggagaactacatccggcccgagccccaggac
cacgtcaccagctccttttttcggaggagctccagccacgccctgtgttctcctcctgtt
tgcttggaggaggaggctgcagcatcttctgatctgcccgatgaaagctggtgtccaaag
aggtgtggagctctgaacctgagcctggcctccatgtcgtgcctttcaaagagactcgtt
gcagtaaaaacagtgagaattcctgaggtgggagatctgcggacgctgacggaggaccct
cgcctggacctgaagatccttcacctggtgagggaccccagagccatcctggcctcacgc
atgacggcttttgcagatcagtttcgcgcttggaaaatctggaatgtgacggggcgtcag
ccccggtacgtggacctgtcccagatcaccagcacctgcaaggacatggcagcgtctgca
gaaacgggcctgcagggaccggcgtggctgcacggacgctacctgctggtgcgctacgag
gacttggctctccacccagagaccaaggcgacggagatctacaggtttgtggggctggag
atggaccaacgagtcaggacgtggatctcaaaaaacaccaacagcaacgcgtcggctcag
gccgattggaattacaggtactccacctcgcgggactccagggccacagcggagaactgg
aggctgcggctgggcttcgacgtggtccgaaagattcagagtctgtgcaatcacacgctg
gctttgctgggatacaagcaggttcagtctatagccgagctgcggaacctgtccaccagt
ttggtggagaacaaaaccttccagccgctcacgtggtga
DBGET
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