Oryzias melastigma (Indian medaka): 112152108
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Entry
112152108 CDS
T07439
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04115
p53 signaling pathway
oml04120
Ubiquitin mediated proteolysis
oml04137
Mitophagy - animal
oml04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112152108 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112152108 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
112152108 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
112152108 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112152108 (siah1)
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112152108 (siah1)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112152108 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
112152108
NCBI-ProteinID:
XP_024137159
Ensembl:
ENSOMEG00000000362
LinkDB
All DBs
Position
LG6:complement(26965412..26983436)
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AA seq
341 aa
AA seq
DB search
MSVVPVKSKQASVAPQAPPWNSLFRLLSCIATRNVHDSKEVQTFQEQTKALFGNLMDEEM
SRQTATALPTGTSKCPPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLV
CSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTEKTEHEELC
EFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMM
QSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPR
SIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggtcccagtgaaatccaagcaggcaagtgtagctccacaagctccaccctgg
aactccctgttcaggctgctctcatgcatagcaacaaggaatgtgcacgacagtaaagag
gtccaaacatttcaagagcagacaaaagccttatttggaaatcttatggacgaagaaatg
agtcgccagaccgccaccgcgctgcccacaggaacatccaagtgccccccctctcagcgc
gtgcccaccctgtcaggcaccacagcctccaacagtgacctggccagcctgtttgagtgt
cccgtctgcttcgattatgtcctgccccccatcctgcagtgtcagtctggacacctggtg
tgctccaactgccgacccaaactcacctgctgccccacctgcagaggcccgctgggttcc
atcaggaacctggccatggagaaggtggccaactccgtcctctttccctgcaagtacgcc
tcgtcgggctgcgaagtcacgcttccccacaccgagaagaccgagcacgaggagctgtgc
gagttccggccgtactcctgcccgtgtcccggcgcctcctgcaagtggcagggctccctg
gacgccgtgatgcctcacctgatgcatcagcacaagtccatcaccaccctgcagggggag
gacatcgtgttcctggcgacagacatcaacctgcccggcgccgtggactgggtcatgatg
cagtcctgcttcggcttccacttcatgctggtcctggagaagcaggaaaagtacgacgga
caccagcagtttttcgccatcgtccagctcatcgggacccggaagcaggccgagaacttt
gcataccggctggagctgaatgggcaccggcgccggctgacctgggaggccacgccgcgc
tccatccacgagggcatcgccacggccatcatgaacagcgactgcctggtgttcgacacg
tcgatcgcacagctgttcgcggagaacgggaacctgggcattaatgtcaccatctccatg
tgctaa
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integrated database retrieval system
