Oryzias melastigma (Indian medaka): 112152135
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Entry
112152135 CDS
T07439
Symbol
ddx11
Name
(RefSeq) ATP-dependent DNA helicase DDX11 isoform X2
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
112152135 (ddx11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112152135 (ddx11)
Enzymes [BR:
oml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112152135 (ddx11)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
112152135 (ddx11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ResIII
DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
112152135
NCBI-ProteinID:
XP_024137231
Ensembl:
ENSOMEG00000006612
UniProt:
A0A3B3D5J6
LinkDB
All DBs
Position
LG6:complement(20856052..20871978)
Genome browser
AA seq
896 aa
AA seq
DB search
MESGRDTFPFPYQPYDIQEQFMQALYRALDQGKVGIFESPTGTGKSLSLICGALSWLRDY
DEKKRQEAAALLQEGEAALSTSTTTSSSAEPDWITDFVQKKAERDLVSKLKEEDLKRKKR
EERLEMIRNNAQLKYALKRKSHEDDEAFKLLQLSKEDQAEVPGDQEDEEHIVAEYESDDD
SKSKSRLLGGEDEEDDELVEEHVTKIYYCSRTHSQLAQFVHEVQKSPFSKDISLVTLGSR
QNLCINEEVRRLGSIQRINDRCMEMQKNKHEKQHPEDGAKRKRGPAKSVCPFNKASALQQ
MRDEVLGSVYDIEQLMKVGKETHSCPYYATRLAVPPAQLVVLPYQMVLHEATRRAAGVQL
KDQVVIIDEAHNLSDTLSCIHSSELNGSQLCRAHSQLTQYADRYRSRLKAKNLMYIKQIL
FAIERLVRVLGGKVGQNPQSQNTQTGTEMHTINNFLFKAEVDNINWFKLQRYFEKSMISR
KLSGFVEKYAGSGVTLHAQNSLNKENRRTEGLLNYLKTLKSNQNSASVAQADLQESAEAE
KVLSASPMMQIEGFFLALTNTNADGRVVVHREGTLSESSVKFLLLNPAVHFAEVLKECRS
VIIAGGTMQPVSDFKEELLLSAGVGQERIVEFTCGHVIPPENILPIVMSSGPSGQELDFT
FQSRDLPSMMDETGRILSNICNVVPGGVVCFFPSYEYLRRIICHWEASGALTRLSTKKKI
FQEPKKANLVEQVLSEFSRCIQRSAQESSGLTGALLFSVVGGKMSEGINFSDDLGRCVVM
VGMPYPNIKSPELQEKMSYLNKHLPHSHGRSPGQALVENLCMKAVNQSIGRAIRHRGDYS
AIVLCDRRYSRPATLSKLPAWIRSRTSTHATFGPAFASLRKFFVEKKQQQVFLNGS
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtggaagggacacatttccattcccctaccagccgtatgatatccaggagcag
ttcatgcaagccctctacagagcgctcgaccaaggcaaagtgggcatctttgaaagtcca
actggaacgggcaagtccctgagtctgatatgtggagctttgagctggctgagagattat
gatgagaagaagagacaggaggcagctgcactgctgcaggaaggagaagcagctctctcc
acttctaccaccaccagctcctcagcagaaccggactggatcactgattttgtccaaaag
aaggcagaacgagatctggtatccaaactgaaggaggaagacttaaagaggaagaagaga
gaagagcgattggaaatgatcagaaataacgctcagcttaagtatgctctcaaaagaaag
agccatgaagatgatgaggccttcaagttgcttcagctcagtaaagaggatcaagctgaa
gtaccaggagatcaagaagatgaggagcacattgttgctgaatacgagagcgatgatgat
tcaaagagcaaaagcagattacttggaggtgaggacgaggaagatgacgagctagttgaa
gaacatgtcactaagatctattactgcagtcgtactcactcccagctggcccagtttgtc
catgaggtccaaaagagcccgttcagtaaggacatcagtctggtcactctgggatctcga
cagaatctgtgcattaatgaagaggtgcggcgccttggcagcattcagcgcattaatgac
cgctgcatggagatgcagaaaaacaagcacgaaaagcagcatcctgaagatggtgcaaaa
cgcaaacgaggtccagccaagagtgtgtgtcccttcaacaaagcctctgcattgcagcag
atgagggatgaggttcttggaagcgtctatgacattgagcagctgatgaaagtgggaaaa
gagacgcactcgtgcccgtattacgccactcgcctagcagttccccctgcacagttggtg
gttttgccgtatcagatggtgcttcatgaagctacgagacgggcggcgggggtccagctg
aaggaccaggtggtgataatagacgaagctcacaatcttagcgacactctctcctgcatt
catagctcggagctcaatggatcacagctttgccgtgcacattcccaacttactcagtat
gcagaccgctacaggagcagactgaaggctaaaaacctgatgtacatcaaacaaattctc
tttgccatcgagaggctggtccgagtgttgggaggtaaagtcggacagaacccccagagt
cagaatacacaaacaggaacagagatgcatactattaacaacttcctcttcaaggccgag
gtcgataacatcaactggtttaagttacagagatactttgagaagagcatgatcagcagg
aagctcagcgggtttgtggagaaatacgccggctcaggtgtgacgctgcacgcccagaac
tccttaaataaggagaaccgacgcacagaagggttactcaactacctaaagacactaaag
agcaatcagaactctgcatctgttgctcaagcagacctgcaggagtcagccgaggcagag
aaagtgctctctgcatctcccatgatgcagattgaaggtttcttcctggctctcaccaac
accaacgctgatgggagagttgtggtgcacagagaaggcactttgtcagaaagcagcgtc
aagttccttctgctgaacccagcggtccactttgctgaggttctgaaggagtgcagatcc
gtcatcattgctggaggaaccatgcagcctgtttcagactttaaagaagagcttttgctt
tctgctggagtgggacaagagcgcatcgtggagtttacctgcggtcacgtcattcccccg
gagaacattcttcccatcgtcatgagcagcggtccatctggccaggagctggacttcacc
ttccaaagcagagatttaccgagcatgatggacgaaacgggacgcattctctcaaacatc
tgcaacgtggtccccggtggggtcgtgtgtttcttcccctcctatgaatatttgaggcgg
atcatttgtcactgggaggccagcggcgcgctaacccgactgtccactaagaagaagatc
ttccaggagccaaaaaaggccaacctggtggagcaagtgctgagcgagttctcccgttgt
atccagaggagcgctcaggagagcagtggactgacgggagcgttgcttttttctgtggtt
ggaggaaagatgagcgaaggaatcaacttctcggacgacttgggcaggtgtgtggtaatg
gttggaatgccgtatcccaacataaaatccccggagctgcaggaaaagatgtcatatttg
aacaaacacctgcctcacagtcacggaaggagccccggacaagcactagttgagaacctc
tgcatgaaagctgtcaatcagtccataggtcgagctatccgtcaccgtggcgactattcg
gcgatagtgctgtgtgacaggcgttactctcgtcccgccacgctctccaaacttccagct
tggatcaggagccgcacaagcacacacgcaacgtttggtcccgcttttgcttccttacgc
aagttctttgtggagaagaagcagcagcaagtcttcctcaacggctcgtga
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