Oryzias melastigma (Indian medaka): 112152175
Help
Entry
112152175 CDS
T07439
Name
(RefSeq) sodium/potassium/calcium exchanger 1 isoform X1
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
112152175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oml02000
]
112152175
Transporters [BR:
oml02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
112152175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
Na_trans_assoc
DUF4667
BUD22
Fimbrillin_C
Motif
Other DBs
NCBI-GeneID:
112152175
NCBI-ProteinID:
XP_024137323
Ensembl:
ENSOMEG00000021596
LinkDB
All DBs
Position
LG6:complement(18025206..18036209)
Genome browser
AA seq
743 aa
AA seq
DB search
MHYTRRKRLQMSRVLFLLSGVFLCTLYQLSISAQLYEPLPQVGVNVEGSAEGVQEATLKP
DVQTTPPTTHGLEPTDEKTTEMDVTSHTQKAMNTYVTTETTMESEGSTPTESPASPATNR
TMVNCIYVAPEPPAEKTTPAPAPVTTVPPASPGEAPHVKGDYPEDIFSIEDRRRGWVILH
ILGMVYMFVSLAIVCDEFFVPALGVITDKLEISDDVAGATFMAAGGSAPELFTSLIGVFI
AHSNVGIGTIVGSAVFNILFVIGMCALFSREVLHLTWWPLFRDVSFYILDLVLLIIFFLD
NVILWWESVMLVACYSLYVVFMKFNVQLERAFKTQLHKHKRIVKVIAVEEPEKTNGNGEE
IPPPAPEDKNRLKLKPSLQRGGSSASLHNSTMRNTIFQLMIHTLDPLGNGKFKEKAETLT
SVARRKSEPKAQDKGEDNQKKTDQPKEQEAAPTADKEKKEQQDDKKVLPIHVLMVFKKPR
SQSLIPVYDDVPAEQRESGGSEDSGSDEEDEEDESDESSEEEEEEEEEEEEEEEEKEDEP
LSLQWPDTRSKQATYLFLLPIVFPLWMTVPDVRRQKSRKFFAITFLGSIMWIAIFSYLMV
WWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITV
GLPVPWLLFSAIHGFGPVAVSSNGLFCAIVLLFLMLLFVIISIAACNWKMNKVLGSTMFL
LYFFFLVVSVLLEDRVIICPVSV
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcattacacaagaaggaagagactgcagatgagccgggtcttgtttctcctctctgga
gttttcctctgcaccctctaccagctgagcatcagtgctcagctgtatgagcctctgcct
caggttggcgtgaacgtggaaggttcagcagagggtgttcaggaggcgacgttgaagcca
gacgtgcagacaacgcctcccaccacacacgggttggagcccacagatgagaagacgaca
gagatggacgtgacatcccacacacagaaggccatgaacacgtatgttaccacagaaaca
actatggagtccgaaggatccacccctactgaatcacccgcctcgccagcgacaaaccgg
acgatggtgaactgcatctacgtggcccctgaacccccagcagagaagactaccccagct
ccagctcctgttaccaccgttcctccagcttcgcccggagaagctccacatgtgaagggc
gactacccagaagacatcttctcaatcgaagaccgcagaagaggatgggtgatcctccac
atcttggggatggtttacatgttcgtgtctcttgcgatcgtctgcgatgagttcttcgtg
cctgcgctcggtgtgatcactgacaagttagaaatctccgatgacgtagcaggagccacc
ttcatggcggccggaggctcggccccggagcttttcacctctctgataggggtcttcatc
gcgcacagcaacgtggggatcggcaccatcgtaggctcggccgtctttaacattttgttt
gtgattgggatgtgcgccttgttttctcgggaggtgcttcatctcacctggtggccactt
tttagagatgtgtcattttacattcttgacctcgtcttactgataatcttcttcttggat
aacgtcatactgtggtgggagagcgtgatgctggtggcctgttactctctctatgtggtg
ttcatgaagtttaatgtacagctggaacgtgctttcaagacgcaactgcacaaacacaag
aggattgtgaaagttattgcagtggaagaaccagaaaagacaaatggaaacggtgaagag
attccccctcccgctccagaggacaagaatcgtttaaagttgaagccatcccttcagcga
gggggcagttcagcctccttgcacaacagcaccatgagaaataccatcttccaactgatg
attcacacgctggaccccctgggaaatgggaagtttaaggaaaaggctgagactctgaca
agcgtggctagacggaaatctgagcccaaagctcaggacaaaggtgaagacaatcagaag
aaaaccgatcagcccaaagaacaagaggctgctccaaccgcagacaaagagaagaaggag
cagcaagatgacaagaaggtactccccatccatgtgctgatggttttcaaaaagcccaga
agtcagtctttgatacctgtctatgacgatgtgccggcagagcagagggagtcggggggc
tcagaagattctgggagtgatgaggaggatgaagaggatgaaagtgatgagtccagtgaa
gaggaggaggaggaggaggaggaagaggaggaagaagaagaggaaaaagaagatgagcct
ctgtcgctgcagtggcctgacactcgcagtaaacaagccacctacctcttcttactgccc
atcgtcttccctctgtggatgacagttcctgatgttcgcagacagaaatccaggaaattc
tttgccatcaccttcctgggctccatcatgtggattgctattttttcttatcttatggtg
tggtgggctcatcaggtgggagagaccattgggatctctgaggagatcatgggccttaca
atcctcgctgcagggacttccatcccggatctcatcacgagtgtgattgtggctcgcaaa
ggcctgggggacatggcagtgtccagctcagtgggcagcaacatctttgacatcactgtg
ggtctgcctgtcccctggctgctgttctcggccatccatggtttcggtccagtggctgtt
agcagcaatggactcttctgtgccattgtgctgctcttcctcatgctgctcttcgtcatc
atctccattgccgcctgtaactggaagatgaacaaggtgctgggatccactatgtttctc
ctgtacttcttcttcctggtggtcagcgttctgctggaggaccgagtcattatctgcccc
gtttccgtctga
DBGET
integrated database retrieval system
