Oryzias melastigma (Indian medaka): 112152194
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Entry
112152194 CDS
T07439
Symbol
rfx4
Name
(RefSeq) transcription factor RFX4 isoform X1
KO
K09174
regulatory factor X 4
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112152194 (rfx4)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Other basic domains
RF-X
112152194 (rfx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
112152194
NCBI-ProteinID:
XP_024137371
Ensembl:
ENSOMEG00000010659
LinkDB
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Position
LG6:23127570..23146530
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AA seq
815 aa
AA seq
DB search
MQHPATPLAPRPCRCLPGEHQQRAPRLRTERESASFAVHGVILHISCDGQWTQSETRGEP
PRRGKRALSHFLGAAGVVDGKRMHCGLLEEPDMDSTESWIERCLNESESKRYSSHTSLGN
MSTDEHEEKENNRASKPHSTPATLEWLEENYEIAEGVCIPRSALYMHYLDFSEKHDTQPV
NAASFGKIIRQQFPALTTRRLGTRGQSKYHYYGIAVKESSPYYDVMYSKKGAAWVNETGK
KEVTKQTVAYSPRSKLGTLLPEFPNVKDLNLPASLPEERVSTFIMMYRTHCQRILDTVIR
ANFDEVQSFLLHFWQGMPPHMLPVLGSPTVVNIVGVCDSILYKAISGVLMPTVLQALPDS
LTQVIRKFAKQLDEWLKIALHDLPENLRNIKFELSRRFSQILKRQTSLNHLCQASRTVIN
SADITFQMLEDWRNVDLNSITKQTLYTMEDSQEEHRQIIIQLYQEFDRLLEEQSPIEAYI
EWLDSMVDRCVVKVAGKRPGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHL
MFDDYVLYLLESLHCQERANDLMRAMKGEGVTAEPEEDFTLSETTPTSPSPGSYSPARSV
NSVSVSSVGSPTAAVSPEFTGVNASTGAVQSYTWSLTYTVTTAGGSTPEAGQQLSCMRSS
APVPPPSSTHRMPVYPHREEHGYPGSYNYSSYSNQHPHSIQSQYPSLAHEAAIPAPLHYS
TYHRSSAQYQQMSRMEPCLMGSTPRLHPTPVAPRWPDVSPANSCYTSPPLHSSRYPPSGD
MYSPLGPRRNSEYEHSQHFPGFAYINGEATTGWAK
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatcctgccacgccgctcgcacctcgtccatgcaggtgccttcctggggagcat
cagcagcgggctccacgcctgcgcactgaaagagaaagtgcttcctttgccgtccacggt
gttatcctccacatctcctgtgacgggcagtggacacagagcgagacgaggggagagccg
ccgaggagggggaaacgtgcactaagccattttcttggagcagccggcgtcgttgatggg
aagaggatgcattgcgggctgctggaggagcctgacatggattccacagagagctggatt
gaaaggtgcctcaatgaaagtgagagcaagcgatattccagccacacgtctctggggaac
atgtccaccgacgaacatgaggaaaaggaaaacaacagagcctcaaaaccacattcaaca
ccagctactctggaatggttagaagagaattacgagattgcagaaggtgtatgtatcccc
agaagtgccctctacatgcactacctggactttagcgagaagcacgacacgcagccggtg
aacgccgccagctttggaaagattataaggcaacagtttccagcactaaccaccagaaga
ctgggaaccagaggccagtctaagtatcactactatggcatcgcggtgaaggagtcgtct
ccgtactacgacgtgatgtactccaaaaaaggggcggcgtgggtgaacgagacggggaag
aaagaggtcacgaagcagacagtggcgtattcaccgcgctccaaactggggacgctcctg
ccagagtttccaaatgtcaaagacctaaatttgcctgccagcctgccagaggagagggtg
tcgaccttcatcatgatgtacagaacacactgtcagaggatactggacactgttatccga
gccaactttgacgaggttcaaagcttcctgctgcacttctggcagggcatgcccccccac
atgctgcctgtcctcggctcccccactgtagtgaacatcgtcggcgtttgcgactccatc
ctctataaggccatttctggggttctgatgcccaccgtcctgcaagcactgcctgacagt
ttgactcaggttatccgaaaatttgccaaacaacttgacgaatggctaaaaatagcactt
cacgacctccccgaaaacctgagaaatatcaagtttgagctgtctcggagattctctcag
atcctgaagcggcaaacatcgttaaaccatctctgtcaggcgtcccggactgtaataaac
agtgcggacatcacctttcaaatgctggaggactggaggaacgtggacctgaacagcatc
accaagcagacactttacaccatggaggactcgcaggaggagcaccggcagatcatcatc
caactgtatcaggagttcgaccgcttattggaggagcagtcgccgatcgaggcgtacatc
gagtggctggattccatggtggaccgctgcgtcgtcaaggtggcaggaaagaggcccggg
agcctgaagaaggtggctcaacagttcctgctgatgtggtcgtgttttggtaccagagtc
atccgggatatgaccctccacagcgcgcccagcttcggctccttccacctgatccatctc
atgtttgacgactacgtgctctacctgttagagtctctgcactgtcaagagagggccaac
gacctgatgagggccatgaagggcgagggggtcacagcagaaccagaggaggacttcacg
ctctcagaaaccactcccacctcgccgtctccaggctcctactctccagctcgatcagta
aactccgtcagcgtctcctcggttggttcccccacagccgcggtgtctccagagttcacc
ggagtgaacgcctccacaggtgctgtgcagtcatatacctggtcccttacatacacagtg
acaacagctggtggttctactcctgaggccggacagcagctgtcctgcatgaggagcagc
gctccggttccccctccctcctccacccacaggatgccggtgtatccccacagagaagag
catggttaccctggtagctacaactacagcagctacagcaatcagcatcctcactccatc
cagagccagtatcccagtctggcgcatgaagcggcgatccccgccccccttcactactcc
acctaccaccgctcatctgcacagtaccaacagatgtctcggatggagccctgtctgatg
ggcagcactcctcgtttgcaccctacgcctgtcgccccccggtggccggatgtgtcccct
gccaacagctgttacaccagcccacctttgcattcgtcccgttaccccccctctggggac
atgtactctcccctggggcctcgcaggaactcagagtatgaacattcgcagcattttccc
ggcttcgcgtacataaacggcgaggccaccacaggctgggccaaataa
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