Oryzias melastigma (Indian medaka): 112152201
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Entry
112152201 CDS
T07439
Symbol
spty2d1
Name
(RefSeq) protein SPT2 homolog
KO
K15193
protein SPT2
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oml03021
]
112152201 (spty2d1)
Transcription machinery [BR:
oml03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
112152201 (spty2d1)
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Ortholog
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GFIT
Motif
Pfam:
SPT2
SPT2_N
Cytadhesin_P30
Motif
Other DBs
NCBI-GeneID:
112152201
NCBI-ProteinID:
XP_024137383
Ensembl:
ENSOMEG00000018932
UniProt:
A0A3B3CHD1
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All DBs
Position
LG6:29399298..29407249
Genome browser
AA seq
706 aa
AA seq
DB search
MMDFDNILDIASQNQGLSSVQRRYSLETGPPKRDPKSKGVNPAAVQALLKKRTNDTKLKE
MEMKKQKQDLLAKRVELKSDRKARAMASRTKDNFKGYNGIPVVDVPKKRGSKADKQDNDH
EQGFQNNSIDPLDDEDNYEYEQTDSEEEPEPLRPGRPAEVHGSSRKFPQKPCGPPRPSAP
PAMNFADLLKLAEKKQFEPVELKPKAVKKEERLHTASEIREMEMERKAKRLDKHKEVKPE
RERDARPQSSSSLMRKTPADKEQKFSKPQKSSGEKPIKAVKKGLPSSSTARSSSSSSSVH
EREDRVKASRNNEHRPKPGFTSAAVSSKVPSKPALSQVSTPPSSQKSSTSSDLSFRKDPS
LLQKGGSRTSSTAGMVQKSQHGSSPQFRTTQGGLAKPGPAGRPVKPAKAELPNPGIPPGV
KLSSNSMTRLPAGGPPRTGGQPLGRPGGTPQARPGSVPQVRPGGGHPGTSGPRPSRPGGQ
VPGRPAAGPGPARPKCTVVSETISSKNFGGPRLGAAAQAGIPNRPGMGPRPGMGPRPGMG
PRPGMGPQPGMGPRPGMGPRPGMGPGPGMGPRPGMGPRPGMGPRPGMVPRPGMPPRPPGP
MLPPITSAYKRKYEDEEEYDSEMDDFIDDGGEEQEEISRHIKEIFGYDRNRYKDESDYAL
KFMESSWKDMQKEEARSLRLAVQEDLEEEKREEEEMKKKAKRKKTS
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgatggactttgacaacatcctggacatcgcgtctcagaaccaggggctcagcagtgtt
cagagacgatacagtttagaaactggaccgcccaaaagggaccccaagtccaaaggtgtg
aatcctgcggctgttcaggcgttgctaaagaagcggaccaatgacactaaactgaaagaa
atggagatgaaaaagcagaagcaggatcttctggctaagagggtcgagttgaagtcggat
cggaaagctcgagccatggcctccaggacaaaggacaacttcaaaggttacaacgggatt
ccggtggtggatgttcccaaaaagaggggttcaaaagcagataaacaggacaacgatcat
gagcagggattccagaataactccattgaccctttagacgacgaagataattatgagtac
gagcagacggactcggaggaggagcctgagccgctgagacccggtagacctgcagaggtt
catgggagcagcaggaagtttcctcagaagccctgtggaccacccaggccttctgctcct
cccgccatgaactttgctgatttgctgaagctggcagagaagaaacagtttgaacctgtt
gaactgaaacccaaagctgtgaaaaaagaagagcggctccacacggccagcgagatccga
gaaatggagatggaacgcaaagccaagagactcgacaaacacaaagaagtgaagccagaa
cgggaacgagacgccaggccccagtccagctccagtctgatgaggaaaacccctgcagat
aaggagcagaagttcagtaaaccccagaagagctctggagagaaacccatcaaagcagtt
aagaaggggctcccatcttcttcaaccgctagaagctcctcgtcttcttcctccgttcat
gaaagagaagaccgagtcaaggcgtctcgcaacaacgaacacagaccaaaacccggcttc
acatcagctgctgtctccagtaaagttccttcaaaacccgcgttgtctcaggtctctaca
cctccatccagccagaaatccagcacctcaagtgaccttagcttcaggaaagacccatcc
ctgcttcagaaaggagggagcagaacttctagtacagctggcatggttcagaagtctcag
cacgggagctcgccgcagttcagaaccactcagggtggactcgctaagccgggaccagca
ggccgacccgtaaagcctgctaaagcagaactcccaaatcctggaattcctcctggagtc
aaattgagcagcaactccatgacgagacttcctgcagggggtcctcctcggacagggggc
cagcctcttggaaggcctggtggcactccccaggcaagacctggaagcgtcccacaggtg
agaccgggaggtggccaccctggaacgtccggacctcggcccagtagacctggagggcag
gttccagggcggccagctgccggcccgggacctgcaagacctaagtgcaccgtggtgtcg
gagaccatttcatcgaagaacttcggtggacctagattgggagctgcggcccaggccggc
atcccaaacaggccaggaatgggacctcgaccgggcatgggacctcgaccgggcatggga
cctcgaccgggcatgggacctcaaccagggatgggaccaagaccagggatgggacctcga
ccggggatgggacccggaccagggatgggacctcgaccggggatgggtcctcgaccggga
atgggacctcgaccagggatggtgccaagaccaggaatgccacccagaccaccgggaccg
atgctgccgcccatcacatccgcctacaaaaggaaatacgaggatgaggaggaatacgac
tccgagatggacgacttcatcgacgacggtggcgaggaacaggaagagatctccagacac
atcaaggagatctttggatatgatcgaaacagatacaaagacgagagcgactacgccctg
aagttcatggagagcagctggaaagacatgcagaaggaagaagcacgaagcctcagactg
gccgtccaggaggacctggaggaggagaagagggaagaagaggagatgaagaagaaagcc
aagaggaaaaagaccagctga
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integrated database retrieval system