Oryzias melastigma (Indian medaka): 112152216
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Entry
112152216 CDS
T07439
Symbol
fanci
Name
(RefSeq) Fanconi anemia group I protein isoform X1
KO
K10895
fanconi anemia group I protein
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
112152216 (fanci)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oml03400
]
112152216 (fanci)
DNA repair and recombination proteins [BR:
oml03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
112152216 (fanci)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_HD2
FANCI_S1
FANCI_S4
FANCI_S3
FANCI_S2
FANCI_HD1
FANCI_S1-cap
Motif
Other DBs
NCBI-GeneID:
112152216
NCBI-ProteinID:
XP_024137423
Ensembl:
ENSOMEG00000011602
LinkDB
All DBs
Position
LG6:23707537..23717944
Genome browser
AA seq
1357 aa
AA seq
DB search
MKAEVEKIVLLSDKDTTTELQKYLSSLTNDQLNTVITNSALKGKNVLTLIKGILKGSPPN
CTEGSNRRLAVYQHCIPLCESGDLQTEVAADIIGLLMLETHTLSGPSLAQLANLYVDSIK
VGKMGSGKSLELFPTILTALAACEALSYGKGELSGEEYKKQLINSLCSSRWDPQCVIHLT
TMFRDVPLSSDELKFLVEKTLRMFTKLDLQEIPPLVYQLLLLSAKGSKKQVLDGIINYFK
EQDIRQEEEQNCGEDMDLEVQSIPQDQLRHVEGTVILHMVFAIRLDHELGREFLKSFKTS
YADMCPFSVALLLSVARVQRYEEQVFDLLKGAVIKSYKDEHLQQGSKFLQDLLPGSCSVA
QMILDTVKNSIFGWDHVTQGLVQLGFFLMDTFGPKPGPFGKTTEGPVGTTRTPTQQSCKL
GGQVLLQGFKMHEPIRGEILEQVLNRLVTKSASPVSHYLDLFSDIVISAPMILLESSSKV
IETFDHLSYLPLATVQGLLKAVQPLLKVSISLKDALILVLRKAMFSSQLDGRKSAVAGFL
LLLKNFKVLGSLASSQCSQAVSSSQVQVDVHSRYNSAANEAFCLEILSSLRRCLGQQADV
RLMLYEGFYDVLRRNSQLASSIMQTLLSHLTRYYEPEQDLLPPLKLEPCITAHGDQVYLQ
EPLAHLVSCTVQCLLWLQNTQQSANHNADDSDDDEAEGEGYQSHLQTMLESVTRRMIKSE
LEDFELDKSAEFSMGSSVGVKNNIYAVLVMGVYEVLIEYNFIKANYNKSRFEELINLFSC
YNKLSEILKEKSGKVRTPSNKTPRSLLSMGFASTLITVLFKDNSQSREEALSVLRSNAEF
VRYALSVVVQKIQQLEESGQTDGPDGQSAEKTFRFLCDMTSVLMWRYTNIPSVVEEAGRK
DKRCSLSQLCLEGLLRIFTACQQRYPDKMAQLLSTMDIEEEEAEQDEATEMNYFYIRQFQ
RALFTKLSGNEEDFNSREAQLLVSILSVLSRQLNPSSKQFVQMITWTVKICKETSFEDSA
FSKGLLSLLFNLHVLYKSPAGLLLELCQDIHSQLGDIDEDVEVEKQNIFAIINMKTASNA
VLFVLSQVDKILDEVEWLIARKKSQASSEKPNGGEDTQSASRQDPVEKAVTLQLGTLVTA
LNELVQTSLQPGNCTITLLRVLSRTYSILTTLVKYYIQVCTSQHSALPARFEKLVKLSGS
HLTPQCYAFITYAQSGETVEGDEKKKKKKNEANTVASAKLLRETKATPNLIFSIEQYEKY
LITLSKKSKVHLNFITRDNLVKNVHSYTTYNVCKNVPPGKFDAVHEAQHFKRFPHQRYDS
GSSSAGAGPQSGDHRGTKCRGDPGAQKEEEKTLSSSF
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctgaggtggaaaaaattgtgctgctgtcagacaaggacaccacaaccgagctt
caaaagtacctgtcttctttgacaaatgaccaacttaatactgttataaccaatagtgct
ctaaagggcaaaaacgtccttacgttgattaaaggcatattaaaaggttctcctcctaat
tgcactgagggctcaaatcggaggcttgctgtttatcaacactgcatccctttgtgtgaa
tctggtgaccttcagactgaggtggctgctgatattattggacttcttatgcttgagact
cacacgctgtccggaccgtctcttgcacagctggcaaatctatatgttgattccatcaaa
gtgggtaaaatggggagtggaaaatctctggagctttttccaacaatccttaccgccctt
gctgcatgtgaagccttgtcgtacggcaaaggtgaactcagtggtgaagaatataaaaaa
cagctgattaacagcttgtgctcaagcagatgggacccacagtgtgttattcacctgaca
accatgttcagggacgtccccctgtcctctgacgaactgaagtttctggtggagaagacg
ctgaggatgttcaccaaactggatctgcaggagatcccgccgctggtttaccagctgctg
cttttgtccgctaaaggctctaagaaacaagtcctagatggaatcattaattacttcaaa
gagcaggacattcgccaggaagaagagcagaactgtggggaagacatggatctagaagtt
cagtctattcctcaggaccagctgaggcatgtggaaggaacggtcattctacacatggtg
tttgccatacggctggaccatgaactcgggagagaattccttaaaagcttcaagacttcc
tatgcagacatgtgtcctttcagtgttgcccttctgctgtcggtggctcgtgttcagcgt
tatgaagagcaggtatttgaccttttaaagggtgcagttatcaaaagctacaaggacgag
catctgcagcaagggtcaaagttcctgcaggatctgctgccggggagctgcagcgtggct
cagatgattctggacaccgtcaagaacagtatttttggatgggatcacgtcacccagggt
ctggttcagctgggcttcttcctcatggacacgtttggacccaaaccgggaccatttggc
aaaaccacagagggacctgttggcacaacgcgaacccccactcagcagtcctgtaagcta
ggggggcaggtcctcttacagggctttaagatgcatgagccaatcagaggagagatcctt
gagcaggtgctgaatcgtctggtcacaaagtcggcttcgcctgtcagtcattatttagat
cttttctcagacatcgtcatctccgctcccatgatcctcctcgagtcgtcctccaaggtt
atagagacgtttgaccacctgtcctacctgcctttagccacggttcagggtctgctaaaa
gctgttcagccccttctcaaagtcagcatctccttaaaagatgctttaattctggttctt
cggaaggccatgttttccagccagctggatggaagaaagtctgcagtcgctggtttcttg
ttgctgctgaagaacttcaaagttctgggcagcttggcttcaagtcagtgcagccaggca
gtctcctccagccaggtccaggtggatgttcattctcgttacaactctgctgctaatgag
gcgttctgtctggagatcctcagcagtttacgccgctgtctgggccaacaagcagatgtt
cgcctgatgctgtacgagggattctatgatgttctccgccgcaattctcaactagcaagc
tccatcatgcagacgctgctctcacacctgacacggtattatgagcctgagcaggacctg
ctgcctccgctcaaactggagccgtgcatcaccgctcacggagaccaagtctaccttcag
gagccgctggcacatctggtgagctgcacggtgcagtgcctgctgtggctgcagaacacg
cagcagtcagccaaccacaatgccgatgacagcgacgacgacgaggcagaaggagagggg
tatcagtcccacctgcagacgatgctggagagcgtgacccggcgcatgatcaagagtgag
ctggaggactttgagctggacaagtctgcagagttttcgatgggatccagtgttggagtg
aagaataacatctacgccgtgctggtgatgggagtctacgaggttctgatcgagtacaac
ttcatcaaagccaactacaataagagccgcttcgaggagcttatcaatctgttcagctgc
tacaacaaactgtccgagatcctgaaagagaaatcgggaaaagtccgaactccttctaac
aagacgccccgcagtctgctctccatgggtttcgcctcaactctcatcactgtcttgttc
aaagacaacagtcaaagcagagaggaagccctttctgtacttcgctccaatgcagaattt
gtgcgctatgcgttaagcgtagttgtgcagaagatccagcaactggaggaaagtggacaa
accgatggtccggatggacaaagcgcagaaaagacgttccgttttctttgtgacatgaca
agcgtgctgatgtggcggtacacgaacatccccagtgtagtggaggaggcagggaggaaa
gacaagcgctgcagcctgtcccagctttgtttggagggtctgctcaggattttcaccgcc
tgccagcagcgttaccccgacaagatggcccagctcctctctactatggacattgaagag
gaggaagcagagcaagacgaagctacagagatgaattacttctacatccgacagtttcag
agggcgctgttcactaagttgagtggaaatgaggaggattttaacagcagagaagctcag
ctgctggtcagcattttgagcgtgctctcacggcagctgaatccctcctccaaacagttt
gtacagatgatcacatggacagtgaaaatctgcaaggagacgagttttgaggattctgca
ttctccaagggcctgctttctctcttgtttaacctccatgttctctacaagtctcctgct
ggccttctgcttgaactctgccaagacattcacagccagctgggagatatcgatgaggat
gtggaagtggaaaagcagaatatctttgctattattaacatgaaaacagcttcaaacgca
gttctttttgtgctttcccaagtagacaaaattcttgatgaagtcgagtggcttattgcc
agaaagaagagtcaggcgtcttctgaaaaacccaacggcggtgaggacactcagtctgcg
agccggcaggatccggtcgagaaggcagtgacgctccagctgggaacgctcgtgacggcg
ctaaacgaactggtccagacgtccctccagccgggaaactgcacaatcactctgctgaga
gtgctgagtcggacctacagcatcctcacaactctggtcaaatattacatccaggtgtgt
acgagtcagcacagtgcacttccagctcgttttgagaaactggtcaagttgtccggctcc
cacctaacaccccagtgctacgccttcatcacctacgcacagagtggagaaaccgtcgaa
ggggatgagaagaagaaaaagaaaaagaacgaagcgaacacagttgcttctgcaaagctt
ttgcgggagacaaaggccacgccaaacctgatcttcagcattgaacaatatgagaagtat
ctcattacactctcaaagaagtcaaaggtacaccttaacttcattacaagagacaatctt
gtaaagaatgttcacagttatacaacatataatgtctgtaaaaatgttcctccaggtaaa
tttgatgcagtacatgaagctcagcacttcaagagatttccgcatcaacgctacgactct
ggaagcagctctgcaggagcaggaccacagtcaggagaccacagaggcacaaaatgcaga
ggagacccaggagcccaaaaagaagaagagaaaactctgagctccagtttttga
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