Oryzias melastigma (Indian medaka): 112152273
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Entry
112152273 CDS
T07439
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112152273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112152273
04131 Membrane trafficking [BR:
oml04131
]
112152273
03029 Mitochondrial biogenesis [BR:
oml03029
]
112152273
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112152273
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
112152273
mRNA cycle factors
P-body specific factors
112152273
Membrane trafficking [BR:
oml04131
]
Others
Actin-binding proteins
Myosins
112152273
Mitochondrial biogenesis [BR:
oml03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
112152273
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
112152273
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
AAA_16
nSTAND3
AAA_22
YkzS
NPHP3_N
MYO6_lever
Motif
Other DBs
NCBI-GeneID:
112152273
NCBI-ProteinID:
XP_024137509
LinkDB
All DBs
Position
LG6:16476044..16491885
Genome browser
AA seq
1815 aa
AA seq
DB search
MATSELYSKHARVWLPDPAAVWKSAELTKDYSPGDLTLFLQLEDGTNVEHKVNPQTNILP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYESLPIYE
PDIINAYNGQNMGDMDPHIFAVAEEAYKQMARDQRNQSIIISGESGAGKTVSAKYAMRYF
ATVSCSSGEANVEERVLASSPIMEAFGNAKTTRNDNSSRFGKYIEIGFDKKYCIIGANMR
TYLLEKSRVVFQAHGERNYHIFYQLCASSHLPEFKAFKLGCADDFHCTNQGQSPVIDGVD
DAKELCSTRRAFSLLGMEEEDQMEIYQILSALLHLSNVEIKDQSGDRSSISPDDAHMVVF
CELMGVPSEETAHWLCHRKLKTSKESFVKPVSRVNAVQGRDALAKHIYARLFSWIVGSIN
NALASSGKQNSFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMRE
EIPWTLIDFYDNQPCINLIEAKLGVLDLLDEECKMPKGSDDTWIQKLYNILLKQNSHFEK
PRLSNRAFIIHHFADQVEYQCLGFLEKNKDTVNEEQINALKKTKFDFLLKLFDEDDKGAS
SPSKLTPGRAGQSQRDNKKTVGLQFRQSLHLLMETLNSTTPHYVRCIKPNDLKAPFMLDP
VRAVQQLRACGVLETIRISAAGFPSRWSYQEFFSRYRVLMKQKDVLPDRKQTCKDLLEKL
IKNPEKYQFGKSKIFFRAGQVAYLEKLRSDKLRLACVSIQKTIRCWLARRKYLRMRRSVI
TIQKYARGHQARRYVTFLRQTRAAVTIQCNVRMWLERKRYLQKRSAAIAIQCMLRSHMAK
QQYYKLMFERKAVIIQKWVRGWLAKQHYRRTLAAIVLLQSCVRRVKAKKELRKLKVEARS
VEHFKKLNVGMENKIVQLQQKINEQQKENKEFSERLSVLEKTNTLERERQSREIEGLRRS
EEEARAKAETVPSLLEQLSVLQQKLENTSREKDELEEQTKIYKEQTQQVVDDLNMKNTLL
QSNIDELNKEIVQQAQQLTETKANFENTQQLEKDLAEERSRYQSLLSEHLHLEERHKDLK
EEMNLSNNSGKRGHKRRDSNYSSDSSEFSQSLDSFEGEDSVIQAENENKTVDLPILLRLQ
RRVKELEQEKQSLWQQLDKKEEAQHLKEKEIEKQSTAGRTELDLETLKRKELEFENKKLK
QDLTDLRKSLTNENSDAAPPAPGSLPYKTLLEQLTSSIEELEMRKEEVLLLRSHLVRQEA
LKHRGSILGENAKLEFGEIPPFQDVNKSTDVHALNEDGELWLAYEGLKETNRLLECQMQE
QERVHDEKYQKLLEEANKLRAEKEQQQKLLTQSLVLPEDARIEASLKHEITRLTNENLER
MEQQEKQEKNIRKLTKQLKIYMKKVEDFEASLQQSSVTNDAVRVVSITRKEKEYQGMLEY
KEGDLSRLLKCLIIDLKPRGVAVSFTPGLPAYVIFMCLRYADNISDDRRVSALLNSTISS
IKGVVKRKGEDFEVTSFWLANTCRLMHCLKQYSGDEAFMVHNTAKQNEQSLSNFELSEYH
QLFGDLAIQIYHQLIKCLDNILQPVIVASMLEHEPIQGVLGSKPTGLRKRSTSTSDGAVT
IEVLLQRLSFFLTTMSQHGMDVNVVKQIVKQLFYVIGAVTLNHLLLRKDMCSWSKGLHIR
YNIWQLEEWLGENEMSDCGAKETLEPLIQAAQLLQIKKKTEADALAICNMCTALTTAQII
KVLTLYTPVIEFEERVSTTFISTIKNLLKDRNDSATLMMDAKKIFSVIFPFTPSSVALET
LQIPASLNLAFLTRV
NT seq
5448 nt
NT seq
+upstream
nt +downstream
nt
atggcaacctctgaactttactccaagcacgcccgcgtttggctccccgatccagccgca
gtgtggaagtcagcagagcttaccaaagattacagccccggggacctgacgctgttcctg
cagctggaggatggcacgaatgtggaacacaaagtgaacccccaaaccaacatcctgccc
cctctgagaaacccggacatcctggtgggggaaaatgacctgacggctctcagctaccta
cacgagcctgcggtgctgcacaaccttaaagtgcgctttatagactccaagctgatctac
acgtactgtggaattgtcctggttgccatcaatccttatgagagcctgcccatctatgaa
ccggacatcatcaatgcctacaatggccaaaacatgggggacatggaccctcacatcttt
gcagtggcagaggaagcttataaacaaatggccagagatcaaagaaaccagtccatcata
atcagcggtgagtctggggcgggcaaaaccgtttctgctaagtacgccatgcgttacttt
gccacagtcagctgctcttctggggaggccaacgttgaggagcgagttcttgcatccagt
cccatcatggaggcttttgggaatgccaagacgacccggaacgacaacagtagtcgcttt
gggaagtacattgagattggatttgacaaaaagtattgtataatcggggccaacatgaga
acctacttattagaaaagtccagagtcgtgtttcaggctcatggagaaagaaattaccat
attttctaccagctctgtgcctcctcacatttgccggagttcaaagctttcaagttgggt
tgtgcagatgacttccactgcactaaccagggccagagtcccgtcatcgatggagtggac
gatgctaaagaactgtgcagcaccaggagggccttttctcttctaggaatggaggaagaa
gatcaaatggagatttatcaaattctgtcagcgctccttcatctcagcaatgtggagatt
aaagatcagtcgggggaccggagtagcatctcgcccgatgatgcccacatggtggttttc
tgtgagctgatgggagtacctagtgaagaaacagcccactggttgtgtcacaggaagctc
aaaacctccaaagaaagcttcgtgaagcccgtttctcgagtgaatgcggtccagggtcgg
gatgctcttgccaaacacatttatgccagactcttcagctggattgttggaagtataaac
aatgccttagcatcctcagggaaacaaaactcattcattggcgtgcttgatatttatggg
tttgaaacgtttgatgtgaacagctttgaacaattctgcatcaactatgccaacgagaag
cttcaacaacagttcaacctgcatgttttcaaactggagcaagaggagtacatgagggag
gagatcccctggacgctgatcgatttctatgacaaccaaccctgcatcaacctcatagaa
gccaagcttggagttttggaccttctggatgaggagtgcaagatgcccaaaggctccgat
gacacgtggattcagaaactttacaacatcctcctgaagcagaactctcactttgagaag
cccaggctatcaaacagagccttcatcatccaccactttgctgaccaggtggagtaccaa
tgtttgggcttcttagagaaaaataaggacacggtcaacgaagagcagatcaatgctttg
aaaaaaacaaagtttgattttctgcttaaactgtttgatgaagatgacaagggagcaagt
tctccaagcaaactcactcctggaagagctggacaaagtcagagagacaataagaagacg
gtaggactgcagtttcgacaatctttgcatctgctgatggagacgctgaattcaacaact
cctcactatgtccgctgcatcaaaccaaatgaccttaaagccccattcatgttggaccct
gtcagggctgtgcagcagcttcgagcgtgtggcgtccttgaaacaatacgtatctcagcg
gcaggattcccttctagatggagctatcaggaattcttcagtcgttatcgagtcctgatg
aagcagaaggatgtgcttcctgacagaaagcagacctgcaaagatctcctagaaaagcta
attaagaatccagaaaagtaccagtttggcaaaagcaaaatcttctttagagctggtcag
gtggcttacctggagaagctccggtcggacaaattacgcttggcttgcgtctccatccaa
aagaccatccgctgctggctggctcgcagaaagtacctcaggatgagacggtctgtcatc
accattcagaaatacgcacgtggtcaccaggcacggagatatgttacctttctgcgacaa
acgagagccgccgtcaccattcagtgcaatgtccgcatgtggttggaaaggaaacgctat
ttgcagaagcgctctgcagccattgcaattcagtgcatgttgagatctcacatggccaaa
cagcagtattataagctgatgttcgagcgaaaggcagtaatcatccagaagtgggtgaga
ggctggttggcgaagcagcactacaggcgcacgcttgcggccatcgtcctgctgcagagc
tgcgtgcgtcgcgtcaaggccaagaaggagctgaggaagctgaaagtggaagcccgctct
gtagagcacttcaagaagctcaacgtcggcatggagaacaaaatagtgcaactccagcag
aagataaacgagcagcaaaaagaaaacaaggaattcagtgaaagactgtctgttctggag
aagactaacactcttgagagagagagacagagcagagagatagaagggctacgaagatct
gaggaggaggccagagccaaagcagagacggttccctcgctgctggagcaactttccgtc
ctgcaacaaaaactagaaaacacttccagggagaaagatgagctcgaggagcagacgaag
atctacaaggagcagacccaacaggtggtggacgaccttaatatgaagaacaccttgttg
cagagcaacatcgatgaactgaacaaggaaattgtccagcaagctcaacagttgacagag
accaaagcaaattttgagaacacacaacagctggaaaaggatttggcagaagaacggagt
cgctaccaaagtctgctgagtgaacacctacacctggaggagcgacacaaagacctgaag
gaagagatgaatctcagcaataattcaggcaaacgtggtcacaagaggagagactccaac
tacagcagtgactcctctgagttctcccagagcttagactccttcgagggggaagacagc
gttatccaagcagagaatgagaacaaaacggtggacttgccgattcttcttaggctccag
agaagagtaaaagaattagagcaggaaaagcagtcactatggcaacagctggataaaaaa
gaggaagcccaacacctaaaagaaaaagagattgaaaagcagagcactgctggcaggaca
gagctagacttggaaactctcaagcggaaagaattggagtttgagaacaagaagttgaag
caggatctgaccgaccttcgaaagtctctgaccaatgagaacagcgatgcggccccccct
gccccgggttctctgccctacaagaccttactggaacagctgacctcctccatcgaggag
ctggagatgcggaaagaagaagtgctgctcctccggtcgcatctggttcgccaagaggct
ctcaaacataggggctctatccttggagaaaatgctaaattagaatttggtgaaattcct
ccttttcaagatgttaacaagtccacggatgttcatgcactgaatgaagacggagagctg
tggctggcttatgaaggcctgaaagaaaccaacaggctgctagagtgccaaatgcaggag
caggaacgcgttcatgacgagaagtatcagaagctgctggaggaggcgaacaagctgagg
gctgagaaggagcaacagcaaaagctgctgacccaaagcctcgtcctacctgaagatgct
cgaatagaggcgagcctgaagcatgagatcactcgactcaccaacgagaacctggaacga
atggagcaacaagaaaaacaagaaaaaaacatccgcaagttaacaaagcaacttaaaata
tacatgaaaaaagtggaggattttgaagcgagtttacagcaatcttctgtgacaaatgat
gctgtcagagtggtgagcatcacccggaaagagaaggagtaccagggcatgttggagtac
aaggagggtgacctgagccgcctgctcaaatgtttgatcatcgatctgaagccgcgtggt
gtagcggtcagcttcactccagggcttccagcctacgtcatcttcatgtgccttcggtac
gcagacaacatcagtgacgacaggagagtcagcgccctgctcaactccaccatcagcagc
atcaaaggggtggtgaagaggaagggagaggattttgaggtgacatctttctggctggcc
aacacatgccgcttaatgcactgtctgaagcagtacagcggagatgaagcctttatggtc
cacaacactgctaagcagaatgaacaaagcctgagcaactttgaactgtcggagtatcat
cagctgtttggtgacctggccatccaaatttaccaccaactgatcaaatgcttggataac
attctacagccagttatagttgcgagcatgctggagcacgagccaatccaaggagttcta
gggtccaaacccacaggtctgaggaagaggagtaccagtacttctgatggagctgtaaca
atcgaggtgctcctgcagcgtctcagcttcttcctcaccaccatgagtcagcacgggatg
gacgtgaacgtcgtcaagcagatcgtcaagcagctattttatgttatcggtgccgtcact
ctaaaccacctgctgctgcggaaggacatgtgttcctggagtaaaggactgcacatcagg
tataacatctggcagctggaggaatggctgggggagaatgagatgagtgactgcggtgca
aaggagacgctggagcctctcatccaggctgcacagcttctacagatcaagaaaaaaact
gaagccgatgccctggcgatctgcaacatgtgcaccgcgctgacaacagcacagatcatt
aaagtgttgaccttgtacaccccagtgattgagtttgaagagagagtgtcaaccaccttc
atttctactattaagaaccttttgaaagacaggaatgactctgccaccttaatgatggat
gccaagaagatcttctctgttatcttcccattcacaccgtcctctgtggctttggagacc
ctccagatcccagcgagccttaatctggcgttcctcactcgagtctag
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integrated database retrieval system
