Oryzias melastigma (Indian medaka): 112152274 Help Entry 112152274         CDS       T07439                                  Symbol myo5c Name (RefSeq) unconventional myosin-Vc   KO K10357   myosin V Organism oml  Oryzias melastigma (Indian medaka) Pathway oml04814   Motor proteins Brite KEGG Orthology (KO) [BR:oml00001]  09140 Cellular Processes   09142 Cell motility    04814 Motor proteins     112152274 (myo5c)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:oml03019]     112152274 (myo5c)    04131 Membrane trafficking [BR:oml04131]     112152274 (myo5c)    03029 Mitochondrial biogenesis [BR:oml03029]     112152274 (myo5c)   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:oml04812]     112152274 (myo5c) Messenger RNA biogenesis [BR:oml03019]  Eukaryotic type   mRNA surveillance and transport factors    Factors involved in mRNA localization     Cargo complex      112152274 (myo5c)    mRNA cycle factors     P-body specific factors      112152274 (myo5c) Membrane trafficking [BR:oml04131]  Others   Actin-binding proteins    Myosins     112152274 (myo5c) Mitochondrial biogenesis [BR:oml03029]  Mitochondrial quality control factors   Mitochondrial dynamics    Retention of mitochondria     112152274 (myo5c) Cytoskeleton proteins [BR:oml04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Myosins      112152274 (myo5c) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Myosin_head DIL IQ AAA_16 Csm1_N Myosin_N AAA_22 NPHP3_N Motif Other DBs NCBI-GeneID:  112152274 NCBI-ProteinID:  XP_024137510 LinkDB All DBs Position LG6:16492805..16506899 Genome browser AA seq 1739 aa AA seqDB search MTLLELYTRYNRVWIPDDEQVWKSAEIKQDFHPGNNVLELLLEDSTECHYPVDPSRPELP PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESRIIYTYCGIILVAINPYKQLPIYG DAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHKNQSIIVSGESGAGKTVSARYAMRYF AVVSKSGNKNRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDKKYRIIGANMR TYLLEKSRVVFQADNERNYHIFYQMCSCANLPEFQSLRLMSADKFLYTCMGGDITIEGVD DKSDMNETRRTFSLLGLKEDFQADVFKVLAAILHLGNVEIRDQGNDKSSIAPGDPHLAVF CELLEVSADGLLRWLCNRRIVLSAETVVKPVPKERALTARDALAKQIYAHLFDCIINRIN TALQVPGKQHAFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE DIPWTLIDFYDNQPVIDLIEAKLGIMDLLDEECLFPQGTDQSWLQKLYNFLDANPLFEKP RLSNTAFMIQHFADKVEYQCKGFLEKNRDALYEELVDTMRASKLPFLANFFQEEELNPTA NKGFKVKPARPPVKPTNKQLRTSVGDKFRSSLFLLMETLNATTPHYVRCIKPNDEKLQFE YDSRRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSHVEADVRDKKETCKCV LQRLIQDSNQYKFGRTKIFFRAGQVAYLEKLRLDRLREACVTIQKHFRAWSQRRKYRRMR DAAIVLQQYIRGQRSIRKTVTAEALKQGWAAVVIQRHWRGYSMRQIYQAVCRATITIQAF TRGWMARKQYKKMMEAHKAMILQKYTRAWLARRRFQTMRRLVLNVQLSYRVQQLRKKIEE QTKENRGLMERLTTLANSHSQSTDRLQSLEMQLEKVTSLKESLEAREKKTKEETSLTIAE LQRQIDEVNLDKQNLEKKFEASIKEAKENFDHLNSSLREEMENEARLRKVAENNMEIKKQ DFEKEVVTLKEEIRRLKEERVGLQRKMEEGEQVNSDLQEQIVQLTKHVKVIPELRRDLNN MQNERNNMDRRIKQQSELARAKMREIARHLLGGFVEEEVLLGITSDDSEKIYEPEDLPEA FEGLQKATRILENHQKEQKEKYETQVEGLKLKVDHLQNENSKLQNLFQEKSNVTESIRQE VSRLASENSWIPELKLQVSELQRQKQELEDRVIEQSKELEDKNTEINNVLQIKISEESSQ RRYFEEKTKELEDAKMELEDRVEELEEENDHLKKQQLMENEAKRKLREETSILTAENMDF EEQLDQKDRLIKKLQNQIKSLEASQKAKQNSSIPKEYLGMLEYKREDESRLVQNVILDLQ PKGVVVNMIPCLPAYVLFMCVRHADYLNDDAKLKSLMSAIICGVKKVIVSRCKDFELLSF WLSNTHQLINCLKQYSGEEEFLKQSTPRQKKNCLRNFDLSEHRQIFSDLAIHIYHQFITV LQKILTPAIVPGMLEHESLQGISSMKPTGFRKRSSSMYEESKNFTISSIIKQLSVFLSTM MHHGMDQSLINQVIKQLFFLIGATTLNQIMLRKDMCSCRKGMQIRCNISYLEEWLKEKDL QSSYAMETLTPLSQAAWLLQVNKSTDEDAEEITEKCNELNPVQIVKILNSYTPIDDFEKR VTSSFVRKVQSLLTHEGSTQLMLDTDFHFQVTFPFRSSAQALELLQVPASLHLDFLTRV NT seq 5220 nt NT seq  +upstreamnt  +downstreamnt atgactctgttggaactttacacgaggtataacagagtctggattccagatgatgaacaa gtttggaagtcagctgaaatcaagcaagacttccatcctgggaataatgttcttgaatta ctacttgaagattccactgagtgccactacccagttgatccatccagaccagaactccca cctctcagaaatcctgacatcttggtgggggagaatgatctcacagctctcagctacctg cacgagcctgcagtcctccacaatctaaaagtgcgatttgtcgaatcaagaatcatctat acctactgtggcatcattttggtggcaataaatccttacaagcagcttcctatctatgga gatgcgatcattcatgcgtattccggtcagaacatgggggacatggaccctcacatattt gcagtggcggaagaggcctataaacagatggcaagaaaccataaaaaccaatccatcatc gtcagtggagaatccggagccggcaaaacagtgtcagctcggtacgctatgaggtacttt gctgttgttagtaaatcgggaaacaagaaccgagtggaagacaaagtgctggcatccaac ccaataacagaggcaataggaaacgcaaaaacaacccgaaatgacaacagcagccggttt gggaaatacacagagatcagctttgataagaaataccggatcattggagcaaacatgaga acttacctgttagagaaatccagagtggtttttcaggcagacaatgagcgtaattatcac attttctaccagatgtgttcctgtgcgaacttgccagagttccagagccttagactgatg agcgcagataagttcctttacacctgcatgggtggggacataaccattgaaggtgttgat gacaaaagtgacatgaatgaaactcgacggaccttctccctgctgggattgaaagaagac tttcaagcagatgtctttaaagttctggcagcaatcctgcatttaggaaatgtggagatc agagaccaagggaatgacaaatcatcaattgctcccggtgatccacacctggcagtgttc tgcgagctgctggaggtgagtgccgatgggctgctgcgatggctgtgcaaccggaggatc gtcctgtcggctgagaccgttgtgaagccggtaccgaaggagcgagccctcactgccaga gatgctctcgctaagcagatctacgcccatctctttgactgcatcattaacaggatcaac accgcgctgcaggttcctggaaagcagcatgctttcatcggtgtgctggacatttatggg tttgagacctttgacatcaacagctttgaacagttttgtatcaactatgctaatgaaaag ctgcagcaacagtttaacttgcatgtgttcaagttggagcaagaggagtacatgaaagag gacatcccctggacgctgattgatttctatgacaaccagccagttatcgacctcattgaa gcaaagttggggattatggatttgcttgatgaagaatgtttgttcccccaaggcaccgat cagagctggctgcagaagctttacaactttctggatgccaatcctctgtttgagaagcca aggttgtcaaacacggcgtttatgattcaacactttgcagacaaggtggaatatcagtgc aaaggttttctcgagaagaatcgagacgctctttatgaagaactggtggacacaatgaga gccagcaagttgccatttctggccaacttttttcaagaggaggagctaaaccccacagcc aataagggcttcaaagtcaagccagccaggcctccagtgaaacccaccaataaacaactg agaacttctgtgggagataagttccgtagctccctctttttactgatggagactctgaat gccaccactcctcactatgtgcgctgcattaaaccaaatgatgaaaagcttcagtttgaa tatgattcgaggagagttgtgcagcagctgcgagcttgcggcgtccttgagacgattcgt atcagtgcacagagctacccgtccagatggacttacattgagttttacagtcgatacagc atcctgatgtcgcatgtggaggccgatgtcagagacaaaaaagaaacctgcaaatgcgtg ctgcagagattgattcaagactcgaaccagtacaagtttggtcgcactaaaatcttcttc cgagctggccaggtggcatatctggagaagctgcgtctggaccgcctccgagaagcctgt gtgaccattcaaaaacatttccgagcctggagccagagaaggaagtaccggaggatgagg gatgcagccattgttcttcagcagtacatcagaggacagagaagcatccggaaaacggtg actgctgaagctctgaagcaaggctgggcagcggtggtcatccagagacactggagaggc tacagcatgaggcagatctaccaggcagtctgccgggccaccatcaccatccaggccttc actcggggttggatggcccgtaaacagtacaagaagatgatggaggcgcacaaagcaatg attttgcagaagtacaccagagcatggctggctcgacgccgattccagaccatgcgccgg ctggtgctcaacgtccagctctcctacagggtgcagcagctcagaaagaagattgaagag cagactaaagagaatcgaggattgatggaacgactgacgactttggccaactcgcactct caaagcacggacagactccaaagcctggagatgcagctggaaaaagtaaccagcctaaag gaatctttggaggcgagagagaagaaaacaaaagaggaaactagtttgacaatcgcagaa cttcagaggcagatagatgaggtcaacctggacaagcagaacttggagaaaaagtttgaa gcttccatcaaagaagccaaagaaaactttgaccatttgaacagtagtcttcgagaagag atggagaatgaagcaaggctcagaaaggttgcggaaaacaacatggagatcaagaagcag gacttcgagaaggaggtggtgactctcaaggaggagatccggaggctgaaagaagaaaga gtgggtctgcagaggaagatggaggagggagaacaggtgaactctgacctgcaggagcag atcgttcagctcaccaagcatgtgaaggtcatccccgagctgcgcagagacctgaacaat atgcagaacgagaggaataacatggaccgcaggataaagcaacagtctgaactagcaaga gcaaaaatgagggagattgcaaggcatcttcttggtggatttgttgaagaggaggttctt ttggggataacttcagatgattctgagaagatctacgagcctgaagatttgccagaagcc tttgagggtctgcagaaagccacaaggattttggaaaaccaccaaaaagaacaaaaggag aaatatgagactcaagtggagggactgaaactgaaagtggaccatctgcagaacgagaac agcaagctgcaaaacctgttccaggagaaaagtaatgtcaccgaaagcatccgccaagaa gtgtccagactcgccagcgagaactcgtggattccagagctgaagctgcaggtttcagag ctacagagacaaaagcaagagctggaggaccgtgtcattgagcagagcaaggagctagaa gacaaaaacacagaaatcaacaatgttcttcagataaagatctctgaagagagctcacag cgcagatattttgaggagaaaaccaaagagttggaggatgcaaagatggagctggaagac agggtggaggagctggaagaggagaacgaccacttaaagaagcagcagctcatggagaac gaagccaagaggaaactcagggaggagacgtcaatattaactgctgagaacatggacttt gaggagcagcttgaccagaaggacaggctgataaagaagctccaaaatcaaataaaaagc cttgaagcatcacaaaaagccaagcagaactcttcaatcccaaaggaatacctcggcatg ctggagtacaaaagagaagatgaatctcgacttgttcagaatgtcattctggacttgcag cccaaaggtgtggtggtcaacatgattccctgcctaccagcttacgtcctgttcatgtgc gtccgccacgccgactacctgaacgacgacgccaagctcaagtctctcatgagtgcgatc atatgtggtgtaaaaaaagtcattgtgagtcgctgcaaagactttgagctgctgtcgttt tggctctccaacacacaccagctgatcaactgtctgaagcaatacagcggagaggaagaa ttcctgaaacaaagcaccccccggcagaagaagaactgcctgcggaactttgatttgtcc gaacacagacagatattcagcgatctggccatccacatctatcatcaattcatcacagtc ctgcaaaagatcctcactcctgctatcgtacctggaatgctggagcatgaaagtttacag ggcatttccagcatgaaacccacaggcttcaggaagcgctccagcagcatgtacgaggag tccaagaacttcaccatttcctccatcatcaagcagctctctgtcttcctgtccaccatg atgcaccacggcatggaccagagcctcatcaatcaggtcataaagcagctgttcttcctg attggagccaccacccttaaccagataatgcttcgtaaagacatgtgctcctgcaggaaa ggaatgcaaatcagatgtaacatcagttatctagaggagtggctgaaggagaaggacctt caaagctcctatgctatggaaactctgacgccgctgtctcaggccgcctggctgctccag gtcaacaagtccactgatgaggacgccgaagaaatcaccgagaagtgcaatgagctcaac ccagttcagattgtcaaaattttaaactcttacaccccaatcgatgatttcgagaagcga gtgacgtcctcgtttgtccggaaagttcagtctttactcactcatgaaggatccacccaa ctgatgctggacacagactttcatttccaggtcacctttccgttccgctcgtctgcacag gctttggagctcctacaagtcccagccagccttcatctagacttcttaaccagagtctga

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