Oryzias melastigma (Indian medaka): 112152301
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Entry
112152301 CDS
T07439
Symbol
spi1a
Name
(RefSeq) transcription factor PU.1a isoform X1
KO
K09438
transcription factor PU.1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112152301 (spi1a)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
112152301 (spi1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ets
Motif
Other DBs
NCBI-GeneID:
112152301
NCBI-ProteinID:
XP_024137558
Ensembl:
ENSOMEG00000016481
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Position
LG6:complement(16565648..16568160)
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AA seq
260 aa
AA seq
DB search
MMDSFVITPQASEDIISNDSENYRPPVDLYPYLGGVGEIYEDHRWSFPSDRIQPSDFENS
PVNHLTELQAVPPQQLIQPFRYSSEPLHLHLDPPIAPLSLSTQIPYYTPSLSYQYLPAAS
PGHYYSEEHQRAISPPLEVSEGEDEYDDHHQISFRKDTNKRKIRLYQFLLDLLKNGHMSD
SIWWVDQDKGVFQFSTKHKEALATHWGQQKGNRKKMTYQKMARALRNYGKTGEIKKVKKK
LTYQFSEEVLRNFYLHPFHH
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgatggatagctttgtcattacccctcaggcatcagaggacatcatttcaaacgattct
gagaattaccgaccccctgtggacctgtacccctatcttggtggagttggggagatatat
gaagatcacagatggagctttccctctgaccggattcaaccgtcagactttgagaattcc
cccgtgaatcacctgacagagctgcaggccgtgcccccccaacaactcatccaacccttc
cgctacagcagcgagcctctgcaccttcatctggaccctccgatcgctccgctctccctg
tcaacacagattccgtattacaccccgtccctgtcctaccagtacctacctgcagcatca
cctgggcattactactcagaggagcatcagagagcaatcagccccccactggaggtttca
gagggggaggatgaatacgacgaccatcaccaaatctctttcaggaaagatactaataaa
agaaaaatccgcctgtatcagttcctcctggacctgcttaaaaatggacacatgagtgac
agtatctggtgggtggaccaggacaaaggcgttttccagttctccacaaagcacaaagaa
gctctggcaacgcactgggggcagcagaaaggcaatcgcaagaagatgacctaccaaaaa
atggcccgagctctcaggaactacggcaaaactggcgagattaaaaaggtgaagaagaaa
ctcacgtaccagttcagtgaggaggtgctcaggaacttctatcttcatccctttcatcac
tga
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