Oryzias melastigma (Indian medaka): 112152310
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Entry
112152310 CDS
T07439
Name
(RefSeq) high affinity choline transporter 1 isoform X1
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oml02000
]
112152310
Transporters [BR:
oml02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
112152310
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
112152310
NCBI-ProteinID:
XP_024137571
Ensembl:
ENSOMEG00000006108
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Position
LG6:complement(20608335..20617474)
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AA seq
545 aa
AA seq
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MAVEIPGLVSVIIFYICILAIGVWGSHKSKKVEKTCPGSKSDVSIVGGRNINVLVGIFTM
TATWVGGGYIMGTAEAVYSPNQGLIWALGPPAYVLNFFLGGLFFAKPMRSKRYVTMLDPF
QSRYGNTFTAALLVPALISDILWVACILAALGGTMSVILGLSSTISIIISAAVSIVYTFL
GGLYSVAYTDIIQLCFIFVSLWLCVPFLVLSPAVGALSQTLPLNQTAGHSWVGDLQLEDA
GKWVDQLLLQALGGLSYQALYQRILSAASSVQAQITCFAAAGAVFLMGIPSVVIGIMAAS
ADWNQTDYGLPPPIERGDSGKILPLALQYLTPTWVSVLGIGSVAAAVMSSMDSALLSSAS
LFTKNIYKTTLRKTASERELQWVIKASVLIVGMAGTGLAFGGSSVLALWLVSGDLLYCVI
FPQLVCVLHFRWANTYGAVSGFLLGLLLRLLSGEALLGIPPTILYPGWKEENGIISQNFP
YRTLAMLCSLVAIIAVSYLTEVIFSRQLIPQSWDVLGVLKSNKQTEGENQPTNTDEMKLT
FSTNF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcagttgaaatcccgggactggtgtctgtgatcattttttatatttgtattctggcc
atcggggtgtggggatctcacaaatccaaaaaagtggagaagacatgtcctggcagcaag
agtgacgtttctattgttggtggccgcaacatcaatgtcctagttgggatttttactatg
acagccacgtgggtcggtggaggttatatcatgggaactgctgaggccgtttattctcca
aatcaaggtctcatttgggctctgggtccgcctgcttacgttttaaatttctttttgggc
ggattgttttttgccaaaccaatgagatcaaaacgctatgtgaccatgttggaccctttt
cagagtcgctacggcaacacattcactgcagctctcctggttcctgccttgatcagtgac
atattatgggtagcctgcatccttgctgcgctgggagggacgatgagcgtaattctgggc
ctgtcgtctaccatttccatcatcatctctgcagcggtctccatcgtctacacatttctc
gggggcctctactcagttgcttacaccgacatcattcagctttgttttatctttgtcagc
ctgtggctctgcgtcccatttttggtgctcagtcctgcagttggcgccctctcacaaaca
ctcccactaaaccagacggctgggcattcctgggttggagacctgcagttggaggatgca
ggaaaatgggttgatcaacttcttctgcaagctctaggtggactttcatatcaggctctg
tatcagagaatcctctctgcagcctcgtctgttcaggctcagatcacatgttttgctgca
gctggagcagttttccttatgggaatcccctcggttgtaattggaatcatggctgcctct
gcagactggaaccagacggattatgggctacccccgcctattgagcgtggagattcaggg
aagatcctgccacttgctctgcaatacctaacacctacctgggtctcagtgctgggcatt
ggttctgtggctgcagccgttatgtcctccatggactcagcactgctgtcctcagcatct
ttgtttaccaagaacatatacaagaccaccttgaggaaaacggcctcagaaagggagctg
cagtgggttatcaaagcctcagttctgattgtgggcatggctgggacgggcttggccttc
gggggcagcagtgtacttgctctttggcttgtaagcggcgacctcctgtactgtgtgatt
ttcccgcagctggtctgcgtgttgcacttccgctgggcaaacacatacggcgctgtaagc
ggctttctcttaggtttgcttctgcggttgctgagcggcgaggcgctgctcgggattcct
cctacaatcctgtatcctggttggaaggaagaaaacggcattatcagtcaaaactttcct
tacaggacgttggccatgctttgctccctggtagctatcattgcggtttcctatttgaca
gaagtgatcttctctcgccagctgattcctcagtcctgggatgtacttggagtacttaaa
tccaataagcagactgagggagaaaaccagcctaccaatactgatgagatgaaattaact
ttttctacaaacttctga
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