KEGG   Oryzias melastigma (Indian medaka): 112152354
Entry
112152354         CDS       T07439                                 
Symbol
pak1ip1
Name
(RefSeq) p21-activated protein kinase-interacting protein 1-like
  KO
K14830  protein MAK11
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:oml03009]
    112152354 (pak1ip1)
Ribosome biogenesis [BR:oml03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    112152354 (pak1ip1)
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40 WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 PEP5_VPS11_N ANAPC4_WD40 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_WDR19_2nd Beta-prop_IP5PC_F Beta-prop_Nup120_160 B-prop_COPA_B_2nd Beta-prop_Vps41 Beta-prop_HPS5 Ge1_WD40 Beta-prop_WDR75_2nd BBS2_Mid CNH WD40_like DUF5711 Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 112152354
NCBI-ProteinID: XP_024137647
Ensembl: ENSOMEG00000021526
UniProt: A0A3B3DXU2
LinkDB
Position
LG17:complement(28931250..28935786)
AA seq 357 aa
MAAAVLGLVAGSYEQIIVGYRVKTGEKEWTAEADFTHHTHTASISAVAASQRFVVTGSKD
ETIQLYDMKKRTEHGALLHHDGTITCLQFYGDSHLLSGAEDGLMCVWSTKKWECLKSIKA
HKGHVTSLSVHPSGKLALSVGTDKTLRTWNLVNGRSAFIKNIKQNAHIVRWSPDGDKYVV
VINDKVDIYKLETASVTGTITNPKRISSLKFLNNSILAVAGDDESVRLCDVEKAKWVCEF
KAHETRVKAVDSFTTEDYCVLVTASNDGFIKMWKIHLKEKLESPTLLGEVNTSARLTCLA
VWIPSSVQQTDEKPASEATTSKDLTQVLAKKRRVQIAAEEVILEDESKPKKKKKSGK
NT seq 1074 nt   +upstreamnt  +downstreamnt
atggcagcagcagtgctgggacttgtggctggaagctacgagcagatcatcgttggttac
cgagtaaaaactggtgaaaaagagtggaccgctgaggctgacttcacacatcacactcac
acagcttccatctcagctgtagcagccagccagaggtttgtcgtcacaggaagcaaagat
gagaccattcagttgtatgacatgaagaaacgaaccgagcatggggctttgctgcatcac
gatggcaccatcacttgccttcagttttatggggattctcatttactgagcggagcagag
gacggactgatgtgcgtgtggagcacaaagaagtgggagtgtctgaagtccattaaagct
cataaaggtcacgtcacatcattgtccgtccatccttcaggaaaacttgctctctcagtt
ggaacagacaagactctaagaacctggaatctcgttaatggaaggtccgctttcatcaaa
aacatcaaacaaaatgcacacatagttagatggtctcctgatggggacaaatatgtggtg
gtgataaatgataaagtcgacatctacaagctggagacggcctctgtcacgggaacaatc
acaaaccccaaaaggatctcctctctcaagttcctaaataactccatcttggccgttgct
ggagatgacgagtcggttcggttatgtgacgttgaaaaagccaagtgggtgtgtgagttc
aaggctcatgaaaccagagtgaaagcggttgatagtttcacaacggaggattattgtgtt
ttggtgactgcttcaaatgatggcttcatcaaaatgtggaaaatccatctgaaagagaag
ttggagtctccgactcttctgggggaagtgaacacatcagccagactgacctgccttgct
gtgtggatcccgtcctcagtacagcaaacggatgagaaaccagcatctgaagcaaccaca
tctaaagatcttacccaagttcttgcaaaaaagaggagagtccaaattgctgccgaagaa
gtcattctagaggatgagagcaaacctaagaagaagaaaaagagcggaaaataa

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