Oryzias melastigma (Indian medaka): 112152394
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Entry
112152394 CDS
T07439
Symbol
lrp5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04150
mTOR signaling pathway
oml04310
Wnt signaling pathway
oml04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112152394 (lrp5)
04150 mTOR signaling pathway
112152394 (lrp5)
09133 Signaling molecules and interaction
04519 Cadherin signaling
112152394 (lrp5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112152394 (lrp5)
Membrane trafficking [BR:
oml04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
112152394 (lrp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
LRP1-like_beta_prop
EGF_LRP2
SGL
EGF
cEGF
Motif
Other DBs
NCBI-GeneID:
112152394
NCBI-ProteinID:
XP_024137719
Ensembl:
ENSOMEG00000021239
LinkDB
All DBs
Position
LG6:complement(881897..931430)
Genome browser
AA seq
1634 aa
AA seq
DB search
MGGLLAPRLLLWSCLLSAGSGSPLLLFANRRDVRLVDGEGVRGESAIVVSDLEDAAAVDF
FFEEGLIFWTDVSEEAIKQTRWNQSSNSLKESLGTDQTVVVPGLDSPDGLACDWLSKKLY
WTDSETNRIEVANLDGSSRKVLFWMDLDQPRAIALNPAQRYMYWTDWGEEPRIERAGMDG
RRREVIINEDIFWPNGLTVDLEEQKLYWADAKLSFIHRANLDGSARETVVEGTLTHPFAL
TLSNETLFWTDWQTHSIHACNKHRGDKTREILGGIYSPMGIQVLESYRQPYIRTPCSDNN
GGCSHLCLLSPVPPFYSCTCPTGVQLRADGKTCKPGAEQVLLLARRTDLRRISLDLPDFT
DIVLQVDGIRHAIAIDYDPVEGYVYWTDDEVRAIRRSRLDGSNAVMLVTTEINHPDGIAV
DWVSRNLYWTDTGTDRIEVTRLNGTSRKILISENLDEPRAIVLDPVNGYMFWSDWGERPK
IERANLDGTDRMVLLNTSLGWPNGLALDYATGKLYWGDAKTDKIEVISVDGTGRKTLLED
KLPHIFGFTLLGDYIYWTDWQRRSIERVHKATAVREIIIDQLPDLMGLKATKVTETHGTN
GCAVENGGCSHLCFWRRRAVSCACPMGMELLPDLQTCVVPEAFLLFTNRDSIRSISLGTN
SNDVAIPLTGIKEASALDFDVSERRIYWTDIQAKTISRAYMNGSSVEHVIEFGLDYPEGM
AVDWMGHNIYWADTGTNRIEVARLDGQYRQVLVCKDLDNPRSLDNPRSLALDPANGFMYW
TEWGGLPRIARAYMDGSTITTLVEKVGRANGLTIDYVDHRLYWTDLDTYMIESSNMQGLQ
REIVVDDLPHPFGLTQYKDFIYWTDFNLRTIERADKRGGLNRTVILKGQLELMMDILVFH
SSRQDGTNECSQNNGDCAHLCLATPAGAQCRCASHYTLNSDGRNCSSPSSFLLFTQKNSI
SRMVLGEQSPDIILPIHVVKARAVRYDPLDRLIYWLDGRQNIRRARDDGAMSSVMVTGTA
QPVENQLHDLSLDPYSRHVYWTCENTNTINVQRMDGHIVGVVVKDDTDKPRAIVVNAERG
YMYFTTVQERSAKIEGASLDGTERESLFTTGLIRPVALALDNKLGKLFWVDADLKRIESS
DLTGANRVVLQDSNILQPMGLTVLGEHLYWIDRQQQMIERVDKLTGDRRTRVQGRISFLT
SIHAVEKMDPREFELHPCARNNGGCSHICIAKGDGTPRCSCPIHLVLASDLLRCGEPPTC
SPEQFTCSTGDIDCIPLAWRCDGFPECEDGSDEDNCPVCSVSHFQCDEGSCIDAHKRCDG
EADCADKSDEHDCEVICSPGEFRCGDNQCITKKQRCDGYSDCPDGLDELACDHAPPPSTF
NHDPKPIIPVIAIMLLVFVIGGVYFACQRVEWRCYKGPNGTFPRDYISGTPHVPLNFIAP
SGSQHGTFQGISCGKSIMSSVSLMGSSSSGAPLYDRNHVTGASSSSSSSTKGAYYPQILN
PPPSPATDRSLYNTEIYSSNSPSTTRSYRPYHAIRGAAPPTTPCSTDVCDSDYTPHHLSA
GLPPSAGRWKASAHNGKHNKYYMDLNSDSDPYPPPPTPRSQYMSAEESCPPSPSTERSYF
HLCPPPPSPCTDSS
NT seq
4905 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtctgctggcgccgcggctgctgctctggagctgcctgctgtccgcgggctcg
gggtctccactccttctttttgccaaccggagagatgttcgtctggtcgatggagagggc
gtccgcggggagtcggccattgttgttagtgatttggaagatgcagcagctgtagacttc
ttttttgaggagggcctgatattctggacggacgtcagcgaggaggccatcaaacaaaca
cgctggaaccagtcatccaactccctgaaggagtctctggggaccgatcagactgtggtg
gtgccgggcttggacagtcctgatgggctcgcctgtgactggttgagtaaaaaactttac
tggacggactctgagaccaaccgcattgaagtggcaaacctcgatggctcctccaggaag
gtcctcttttggatggacttggaccagcccagggcaatcgccctcaacccggcacaacga
tacatgtactggacggactggggggaggagcccaggatcgagcgtgccggcatggacggc
aggagaagagaggtgatcatcaatgaagacattttctggccaaatggcctcaccgttgac
ctggaggagcagaaactgtactgggccgatgccaagctgagcttcatccacagagccaac
ctggatggatctgcacgtgagaccgtggtggagggcaccctgacgcatccttttgcactg
acgctgtcaaacgagactctgttctggacggactggcagacccactccatccacgcctgc
aacaaacacagaggagacaaaacgcgagagatcctgggcgggatttactctcccatgggc
atccaggttctggagtcgtaccgacagccttacatccggaccccctgcagtgacaacaat
ggaggctgcagtcatctgtgcctgctctcaccagtgccgcctttctacagctgcacctgc
cccacgggggtccagctcagagcggatggaaagacatgcaagccaggggcggagcaggtt
ctgttgctggctcgacgtacggacctgagaagaatctcgcttgacttgccagacttcact
gacatagtgctgcaggttgatgggatccgccatgccatagctatagactatgaccctgtt
gaagggtacgtgtactggacggacgatgaggttcgagccatccgacgatcccgcctggat
ggcagcaatgccgtgatgctggtcactacagagatcaaccacccagatggcatcgcagtg
gactgggtgtccaggaacctttactggactgacaccggcaccgatcgcattgaggtcaca
aggctcaatggaacctctcggaaaattctgatttctgagaacttggatgaacccagagcc
atcgtgctggatcctgtgaatggttacatgttctggtccgactggggggagcgtcccaaa
attgagcgtgccaacctggatggaacagaccggatggtcctgctgaacacctctctgggc
tggcccaatggattagctttggactacgctacaggaaagctgtactggggagatgcgaaa
acagacaaaatagaggtgatcagtgtggatgggacgggcagaaagactctgctggaggac
aagctgcctcatatctttggtttcactctcctgggggattacatctactggactgactgg
cagagacgaagcattgagagggttcacaaagctacagctgtgagagaaatcatcatcgac
cagctgccagacctgatggggctgaaggcgaccaaagtcacagaaacacacggtacaaac
ggctgtgcggtggaaaacggcggctgcagccatctgtgtttctggcggcggcgggcggtc
agctgtgcctgtcccatggggatggagctcctcccagacctgcagacctgcgtggtgcca
gaggccttccttctattcacaaacagggacagcatcaggagcatctctttgggaacaaac
agcaacgatgtggccattcctctgacaggaatcaaggaagcctctgctcttgattttgat
gtctctgaaaggagaatatattggaccgacatccaggctaagacgatcagcagagcgtac
atgaacggcagttctgttgaacacgtcattgagtttggacttgattacccagaaggcatg
gcggttgactggatgggtcataacatctactgggcagacactggtaccaatcgcattgag
gtggcccgcctggacggtcagtaccggcaggttctggtctgtaaagatctggataatcca
cgttctctggacaacccgcgctcgctagcactggacccggccaacgggttcatgtactgg
accgaatgggggggtctgccccgcatagccagagcctacatggatggcagcaccatcaca
acgctggtggaaaaggtgggccgtgctaacgggctgaccatcgactacgtcgaccatcga
ctctactggaccgacctggacacgtacatgatcgaaagctccaacatgcagggcctccag
cgggagattgtggtggacgacctccctcacccgttcggcctcactcagtacaaagacttc
atctactggacagacttcaacctgcgcaccattgagcgagcagacaagcggggggggctc
aaccgcaccgtgattctaaagggtcagctggagctgatgatggacatcctggtcttccac
tcttcccgtcaggacggcaccaacgagtgttcgcaaaacaatggcgactgtgcccacctg
tgcctggccacgcccgccggtgcccaatgccgctgtgcctcccactacaccctgaactcc
gacggcagaaactgcagctctccatccagcttcctgcttttcactcagaagaacagcatc
agcaggatggttctgggggagcagagtcccgacatcattctgcccattcacgtggtgaag
gcccgagcggtccgttacgacccgctggaccgcctcatctactggctggacggacggcag
aacatacggagggccagagacgacggcgccatgtcctcagtgatggtaaccggcacagct
cagccggtggagaaccagcttcacgacctgagcctggacccctacagccgccacgtttac
tggacctgtgagaacaccaacaccatcaacgttcagaggatggacggccacatcgtcggc
gtggttgttaaggacgacacggacaagccgagggccatcgtggtcaacgccgagaggggg
tacatgtacttcaccacagtgcaggagcgctcagccaagatcgaaggagcgagtctggac
ggaaccgaacgggagtctttgttcaccaccggtctgatccgacccgtcgctctggcgctg
gacaacaagctggggaaactgttctgggtcgatgctgacctcaaacgcatcgagagcagc
gacctgacaggagccaaccgcgtggtcctgcaggactctaacatcctgcagccgatgggc
ctgacggttctgggagaacatctgtactggattgaccggcagcagcagatgattgaacgg
gtggataagctgacaggagacaggcggacgcgggttcaggggcgcatatccttcctgaca
tccatccatgctgtggagaagatggacccccgggagtttgaattacacccttgtgcccgt
aacaacgggggctgctctcacatctgcattgcaaaaggcgacgggaccccccgctgctcc
tgtccaatccacctggttctggcttcagacctgctgcgctgtggagagccccccacctgc
tccccagagcagttcacctgctccacgggcgacatcgactgcatccctctggcgtggcgc
tgtgacggtttccctgagtgtgaggacggcagcgatgaagacaactgccccgtctgctca
gtgtcccacttccagtgtgacgaaggcagctgcatcgacgctcacaaacgctgcgatgga
gaggcggactgcgccgacaagtctgacgagcacgactgtgaagtcatctgctcccctggc
gagtttcgatgtggtgataaccagtgcatcactaagaagcagcgttgtgacggatactca
gactgtcccgatggcctggacgagctggcctgtgaccacgccccccctccttcgactttc
aaccacgaccctaaacccatcatccccgtcattgcaatcatgctgctagtgtttgtgatt
gggggggtttacttcgcctgccagcgtgtggagtggcgctgctataagggccccaacggg
accttccctcgcgattacatcagcgggacccctcacgttcccctcaacttcattgccccc
agcggctctcagcacggcacttttcaaggtatctcgtgcgggaagtccataatgagctca
gtcagcctgatgggcagcagcagcagcggggcgcctctgtacgacaggaaccatgtgacc
ggagcgtcctccagcagctcctcctccaccaaaggagcctactaccctcagattctgaac
ccgccgccctctccagccaccgatcggtccctctacaacactgagatctactcgtccaac
agcccatccaccaccaggtcatacagaccatatcacgccatccgtggtgcggccccgccc
accacgccctgcagcacagacgtctgcgacagcgattacaccccccaccacctctctgcg
gggctgccgccctcagcgggccgctggaaggcatcggcccacaatggcaaacacaacaag
tactacatggacctgaactcagactctgacccgtaccccccgccccccacaccccgctcc
cagtacatgtctgcggaggaaagctgcccgccgtccccctccaccgaacgctcctacttc
cacctgtgccccccacccccgtccccctgcaccgactcctcatga
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integrated database retrieval system
