Oryzias melastigma (Indian medaka): 112152394
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Entry
112152394 CDS
T07439
Symbol
lrp5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04150
mTOR signaling pathway
oml04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112152394 (lrp5)
04150 mTOR signaling pathway
112152394 (lrp5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112152394 (lrp5)
Membrane trafficking [BR:
oml04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
112152394 (lrp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
EGF_LRP2
DUF5050
SGL
EGF
cEGF
Motif
Other DBs
NCBI-GeneID:
112152394
NCBI-ProteinID:
XP_024137719
Ensembl:
ENSOMEG00000021239
LinkDB
All DBs
Position
LG6:complement(881897..931430)
Genome browser
AA seq
1634 aa
AA seq
DB search
MGGLLAPRLLLWSCLLSAGSGSPLLLFANRRDVRLVDGEGVRGESAIVVSDLEDAAAVDF
FFEEGLIFWTDVSEEAIKQTRWNQSSNSLKESLGTDQTVVVPGLDSPDGLACDWLSKKLY
WTDSETNRIEVANLDGSSRKVLFWMDLDQPRAIALNPAQRYMYWTDWGEEPRIERAGMDG
RRREVIINEDIFWPNGLTVDLEEQKLYWADAKLSFIHRANLDGSARETVVEGTLTHPFAL
TLSNETLFWTDWQTHSIHACNKHRGDKTREILGGIYSPMGIQVLESYRQPYIRTPCSDNN
GGCSHLCLLSPVPPFYSCTCPTGVQLRADGKTCKPGAEQVLLLARRTDLRRISLDLPDFT
DIVLQVDGIRHAIAIDYDPVEGYVYWTDDEVRAIRRSRLDGSNAVMLVTTEINHPDGIAV
DWVSRNLYWTDTGTDRIEVTRLNGTSRKILISENLDEPRAIVLDPVNGYMFWSDWGERPK
IERANLDGTDRMVLLNTSLGWPNGLALDYATGKLYWGDAKTDKIEVISVDGTGRKTLLED
KLPHIFGFTLLGDYIYWTDWQRRSIERVHKATAVREIIIDQLPDLMGLKATKVTETHGTN
GCAVENGGCSHLCFWRRRAVSCACPMGMELLPDLQTCVVPEAFLLFTNRDSIRSISLGTN
SNDVAIPLTGIKEASALDFDVSERRIYWTDIQAKTISRAYMNGSSVEHVIEFGLDYPEGM
AVDWMGHNIYWADTGTNRIEVARLDGQYRQVLVCKDLDNPRSLDNPRSLALDPANGFMYW
TEWGGLPRIARAYMDGSTITTLVEKVGRANGLTIDYVDHRLYWTDLDTYMIESSNMQGLQ
REIVVDDLPHPFGLTQYKDFIYWTDFNLRTIERADKRGGLNRTVILKGQLELMMDILVFH
SSRQDGTNECSQNNGDCAHLCLATPAGAQCRCASHYTLNSDGRNCSSPSSFLLFTQKNSI
SRMVLGEQSPDIILPIHVVKARAVRYDPLDRLIYWLDGRQNIRRARDDGAMSSVMVTGTA
QPVENQLHDLSLDPYSRHVYWTCENTNTINVQRMDGHIVGVVVKDDTDKPRAIVVNAERG
YMYFTTVQERSAKIEGASLDGTERESLFTTGLIRPVALALDNKLGKLFWVDADLKRIESS
DLTGANRVVLQDSNILQPMGLTVLGEHLYWIDRQQQMIERVDKLTGDRRTRVQGRISFLT
SIHAVEKMDPREFELHPCARNNGGCSHICIAKGDGTPRCSCPIHLVLASDLLRCGEPPTC
SPEQFTCSTGDIDCIPLAWRCDGFPECEDGSDEDNCPVCSVSHFQCDEGSCIDAHKRCDG
EADCADKSDEHDCEVICSPGEFRCGDNQCITKKQRCDGYSDCPDGLDELACDHAPPPSTF
NHDPKPIIPVIAIMLLVFVIGGVYFACQRVEWRCYKGPNGTFPRDYISGTPHVPLNFIAP
SGSQHGTFQGISCGKSIMSSVSLMGSSSSGAPLYDRNHVTGASSSSSSSTKGAYYPQILN
PPPSPATDRSLYNTEIYSSNSPSTTRSYRPYHAIRGAAPPTTPCSTDVCDSDYTPHHLSA
GLPPSAGRWKASAHNGKHNKYYMDLNSDSDPYPPPPTPRSQYMSAEESCPPSPSTERSYF
HLCPPPPSPCTDSS
NT seq
4905 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtctgctggcgccgcggctgctgctctggagctgcctgctgtccgcgggctcg
gggtctccactccttctttttgccaaccggagagatgttcgtctggtcgatggagagggc
gtccgcggggagtcggccattgttgttagtgatttggaagatgcagcagctgtagacttc
ttttttgaggagggcctgatattctggacggacgtcagcgaggaggccatcaaacaaaca
cgctggaaccagtcatccaactccctgaaggagtctctggggaccgatcagactgtggtg
gtgccgggcttggacagtcctgatgggctcgcctgtgactggttgagtaaaaaactttac
tggacggactctgagaccaaccgcattgaagtggcaaacctcgatggctcctccaggaag
gtcctcttttggatggacttggaccagcccagggcaatcgccctcaacccggcacaacga
tacatgtactggacggactggggggaggagcccaggatcgagcgtgccggcatggacggc
aggagaagagaggtgatcatcaatgaagacattttctggccaaatggcctcaccgttgac
ctggaggagcagaaactgtactgggccgatgccaagctgagcttcatccacagagccaac
ctggatggatctgcacgtgagaccgtggtggagggcaccctgacgcatccttttgcactg
acgctgtcaaacgagactctgttctggacggactggcagacccactccatccacgcctgc
aacaaacacagaggagacaaaacgcgagagatcctgggcgggatttactctcccatgggc
atccaggttctggagtcgtaccgacagccttacatccggaccccctgcagtgacaacaat
ggaggctgcagtcatctgtgcctgctctcaccagtgccgcctttctacagctgcacctgc
cccacgggggtccagctcagagcggatggaaagacatgcaagccaggggcggagcaggtt
ctgttgctggctcgacgtacggacctgagaagaatctcgcttgacttgccagacttcact
gacatagtgctgcaggttgatgggatccgccatgccatagctatagactatgaccctgtt
gaagggtacgtgtactggacggacgatgaggttcgagccatccgacgatcccgcctggat
ggcagcaatgccgtgatgctggtcactacagagatcaaccacccagatggcatcgcagtg
gactgggtgtccaggaacctttactggactgacaccggcaccgatcgcattgaggtcaca
aggctcaatggaacctctcggaaaattctgatttctgagaacttggatgaacccagagcc
atcgtgctggatcctgtgaatggttacatgttctggtccgactggggggagcgtcccaaa
attgagcgtgccaacctggatggaacagaccggatggtcctgctgaacacctctctgggc
tggcccaatggattagctttggactacgctacaggaaagctgtactggggagatgcgaaa
acagacaaaatagaggtgatcagtgtggatgggacgggcagaaagactctgctggaggac
aagctgcctcatatctttggtttcactctcctgggggattacatctactggactgactgg
cagagacgaagcattgagagggttcacaaagctacagctgtgagagaaatcatcatcgac
cagctgccagacctgatggggctgaaggcgaccaaagtcacagaaacacacggtacaaac
ggctgtgcggtggaaaacggcggctgcagccatctgtgtttctggcggcggcgggcggtc
agctgtgcctgtcccatggggatggagctcctcccagacctgcagacctgcgtggtgcca
gaggccttccttctattcacaaacagggacagcatcaggagcatctctttgggaacaaac
agcaacgatgtggccattcctctgacaggaatcaaggaagcctctgctcttgattttgat
gtctctgaaaggagaatatattggaccgacatccaggctaagacgatcagcagagcgtac
atgaacggcagttctgttgaacacgtcattgagtttggacttgattacccagaaggcatg
gcggttgactggatgggtcataacatctactgggcagacactggtaccaatcgcattgag
gtggcccgcctggacggtcagtaccggcaggttctggtctgtaaagatctggataatcca
cgttctctggacaacccgcgctcgctagcactggacccggccaacgggttcatgtactgg
accgaatgggggggtctgccccgcatagccagagcctacatggatggcagcaccatcaca
acgctggtggaaaaggtgggccgtgctaacgggctgaccatcgactacgtcgaccatcga
ctctactggaccgacctggacacgtacatgatcgaaagctccaacatgcagggcctccag
cgggagattgtggtggacgacctccctcacccgttcggcctcactcagtacaaagacttc
atctactggacagacttcaacctgcgcaccattgagcgagcagacaagcggggggggctc
aaccgcaccgtgattctaaagggtcagctggagctgatgatggacatcctggtcttccac
tcttcccgtcaggacggcaccaacgagtgttcgcaaaacaatggcgactgtgcccacctg
tgcctggccacgcccgccggtgcccaatgccgctgtgcctcccactacaccctgaactcc
gacggcagaaactgcagctctccatccagcttcctgcttttcactcagaagaacagcatc
agcaggatggttctgggggagcagagtcccgacatcattctgcccattcacgtggtgaag
gcccgagcggtccgttacgacccgctggaccgcctcatctactggctggacggacggcag
aacatacggagggccagagacgacggcgccatgtcctcagtgatggtaaccggcacagct
cagccggtggagaaccagcttcacgacctgagcctggacccctacagccgccacgtttac
tggacctgtgagaacaccaacaccatcaacgttcagaggatggacggccacatcgtcggc
gtggttgttaaggacgacacggacaagccgagggccatcgtggtcaacgccgagaggggg
tacatgtacttcaccacagtgcaggagcgctcagccaagatcgaaggagcgagtctggac
ggaaccgaacgggagtctttgttcaccaccggtctgatccgacccgtcgctctggcgctg
gacaacaagctggggaaactgttctgggtcgatgctgacctcaaacgcatcgagagcagc
gacctgacaggagccaaccgcgtggtcctgcaggactctaacatcctgcagccgatgggc
ctgacggttctgggagaacatctgtactggattgaccggcagcagcagatgattgaacgg
gtggataagctgacaggagacaggcggacgcgggttcaggggcgcatatccttcctgaca
tccatccatgctgtggagaagatggacccccgggagtttgaattacacccttgtgcccgt
aacaacgggggctgctctcacatctgcattgcaaaaggcgacgggaccccccgctgctcc
tgtccaatccacctggttctggcttcagacctgctgcgctgtggagagccccccacctgc
tccccagagcagttcacctgctccacgggcgacatcgactgcatccctctggcgtggcgc
tgtgacggtttccctgagtgtgaggacggcagcgatgaagacaactgccccgtctgctca
gtgtcccacttccagtgtgacgaaggcagctgcatcgacgctcacaaacgctgcgatgga
gaggcggactgcgccgacaagtctgacgagcacgactgtgaagtcatctgctcccctggc
gagtttcgatgtggtgataaccagtgcatcactaagaagcagcgttgtgacggatactca
gactgtcccgatggcctggacgagctggcctgtgaccacgccccccctccttcgactttc
aaccacgaccctaaacccatcatccccgtcattgcaatcatgctgctagtgtttgtgatt
gggggggtttacttcgcctgccagcgtgtggagtggcgctgctataagggccccaacggg
accttccctcgcgattacatcagcgggacccctcacgttcccctcaacttcattgccccc
agcggctctcagcacggcacttttcaaggtatctcgtgcgggaagtccataatgagctca
gtcagcctgatgggcagcagcagcagcggggcgcctctgtacgacaggaaccatgtgacc
ggagcgtcctccagcagctcctcctccaccaaaggagcctactaccctcagattctgaac
ccgccgccctctccagccaccgatcggtccctctacaacactgagatctactcgtccaac
agcccatccaccaccaggtcatacagaccatatcacgccatccgtggtgcggccccgccc
accacgccctgcagcacagacgtctgcgacagcgattacaccccccaccacctctctgcg
gggctgccgccctcagcgggccgctggaaggcatcggcccacaatggcaaacacaacaag
tactacatggacctgaactcagactctgacccgtaccccccgccccccacaccccgctcc
cagtacatgtctgcggaggaaagctgcccgccgtccccctccaccgaacgctcctacttc
cacctgtgccccccacccccgtccccctgcaccgactcctcatga
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integrated database retrieval system
