Oryzias melastigma (Indian medaka): 112152410
Help
Entry
112152410 CDS
T07439
Symbol
lrrk2
Name
(RefSeq) leucine-rich repeat serine/threonine-protein kinase 2 isoform X1
KO
K08844
leucine-rich repeat kinase 2 [EC:
2.7.11.1
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oml01001
]
112152410 (lrrk2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112152410 (lrrk2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oml04147
]
112152410 (lrrk2)
Enzymes [BR:
oml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
112152410 (lrrk2)
Protein kinases [BR:
oml01001
]
Serine/threonine kinases: TKL group
LRRK family
112152410 (lrrk2)
Membrane trafficking [BR:
oml04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
112152410 (lrrk2)
Exosome [BR:
oml04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112152410 (lrrk2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_LRRK2
Beta-prop_LRRK2
ANK_LRRK2
Pkinase
PK_Tyr_Ser-Thr
LRR_8
COR
Roc
LRR_4
Ras
LRR_14
LRR_1
AAA_22
nSTAND3
Beta-prop_EML_2
TniB
Viral_helicase1
LRR_13
AAA
Ank_2
AAA_16
ARM_LIN_2nd
AAA_33
cobW
NACHT
AAA_19
Arf
NB-ARC
MMR_HSR1
AAA_7
Septin
SRPRB
G-alpha
AAA_14
GTP_EFTU
FeoB_N
NTPase_1
ABC_tran
AAA_18
DAP3
AAA_29
TFCD_C
Motif
Other DBs
NCBI-GeneID:
112152410
NCBI-ProteinID:
XP_024137746
LinkDB
All DBs
Position
LG6:complement(2490878..2573355)
Genome browser
AA seq
2552 aa
AA seq
DB search
MVDQEELEEWLKKLLVRLKSPQEDRQTSTLIQIIQDLLSLALTESAAELFKDKEVHTPLM
VVLSTYISSRRVQQVGLSLFCQLIEICPDTLEQLTRPLQASRDWEVLAVHQQILKVLSQH
STDWRVTLVGLRALALLLTSDLIPALLLEEEEDVFSLAVQAMKTFPTSEEVQFHGCGVLQ
RLLNTVSDTRLVEFVENQDHDVVLSALQRFPGSPDVLLQAMKVLLPLARTASNVEVLMSG
GIRCYSSVIAAMDAFPDVEELQEAACCLFRRFTSESYYNILVINGVQTVTVRACQRFSDN
AVLQAAALSCLADLTSTIVQNREVAEQSLEEGEPEENRGTAEVEDMGLCWMEDCRTALER
HASEPLVQEAACWAIHQLLLHRAPVSHSEEKLDERTPVHRQLMAAMLFHSSSPRVFIAAT
SALATLVSNNRRMSSLLLSRGLHVNLVEMMKRHVDSAEVSKAAFKLLKLLFHGRTTSLDE
LNMVMGQILSTMKEHNFQPEVQLEALQTSLVFLFPDRSLREHGVSVQDPDMADLSLKVLK
NQFVVEGAHTLYLEVLNRFISYPAIQRCGLKVLSALADCSGAVDLLCQQGAIDTVLHTLQ
MFPKDREIHYWGLTLLNYLVFKKKLSRMILPVLASVVLSSLTQFRPDSEMLLKSFQVAVR
MLDACSDAAAELQKRDFDRELFKQLRKESDQSAAPLWKSVCLAVSKMWSNPELHYSMLEK
ACVDGDTVMAECLIEMGADSNKKTKTESLIYQVCERGGPVELVELLLCHGAHEQHIRRAL
AVSVKRADSSTVIQLLARLGLDVNNGALCLGGLRLGRLEAAWLSPLLADRGRGFSLRSNN
SRGISLARYIQSFQRSKSISCSSRLMSDQCLTSGYLSDESDDSSFSVVSMEDCLFYNEDL
ESDGSDSLSAALAPKSCNHSAEELRAEPFKRKQGRRRHASAEVNAQDDFSASISSVHTEN
ESSEPALRRYGRSGSSHRMWGSGESSAALFKEKERIRLLDLTGNELASLSCLTEDSFVQQ
QLGFLLRLDLSHNNLTAFPSAVCQNLMSLTRLDLQGNRLESLPDGLLSLPSLNTLNVSRN
LIGPTLSFDPAVTCPALKHLNLSFNKISAFPHELGCSMQQLEELSLEGNCMTELCMPLCL
PEIKLLDVSRNSVDNICADFLINCSKLEHFNASMNKISHLSQLPIKVTTLRLANNKFSQV
PESVLDLPVLRSLDMRANTIDFLPGPSLWASSNIRELMFSQNCIQILNLSGPVHKWARLE
KLHLSNNNLSEVPPQIGLLEGLTSLDVSHNSNLRSFPDEMGKLSKLWDLPLDGLRLQLDF
KVTGSKTKDIIRSLQQRLKKAVPYHRMKLIVVGNPGSGKTTLIHQLMKQKRQLNSSQNAA
GIRVSDWNIKDRDKKKRLLNVWDFTAGGEELSGSHLHFLTPRAVYLLVYDISKGAGQVDA
LKPWLFTIKAVAPLSPVILVGTHADVSDELHFQDCLRKSRAELPHHQGFPPIRDHHMGYF
CQDSDSVANLRKAILKEVTDFKIQGQPVMGQLVPDSYVELERRLLLERTRTSPEFPILRH
YQLLQLIQESQLQLEEAELPHAVHFLSEVGILLHFNDPALRLQELYFIDPQWLCNILSQK
LTLKSGGLREQPKGVVQRSVMEKFLSESKRFPNSHLEQFVKLLEKFQIALPLGEDQLLVP
SSLSKHRPVIELPHCENSEVIVRLYEMPYFPMDYWSRQICRLLEVSSFLLCGRDKMLRPN
RIYWRTGIYLSWSPEAYCLVEAASEEGSPSSFVRITVPMSRKGRVLLGQVVDHTDSVLEE
WFPGLLNTDMHGNGEALIKRWAVYSFHDGHEPSRILLEDLFRYADNDFLLVNPEDPACTV
PISLIAPDLVLSDQPAGTMLDSEELDVALSKENRLGDGGFGTVYRGVYKNEEVAVKLFNK
HASELYVYRLLRQELAVLGRLRHPSLVGLLAAGSAPQVLVMELALRGSLDSLFEHQNGSL
SRKLQHRIALHVADGLRYLHSAMIIYRDLKPHNVLLFNLKTGSDIIVKITDYGIAQYCCS
MGVRSSEGTPGFRAPEVARGNAIYNQQADVFSLGLLLYDLLTCGERISDGMKFPSEFDEV
AVQGKLPDPVQHYGCSPWPGFQALMKDCLRENPQDRPTSAQVFDRLNSAEMLCLMREIQD
PRLSAAECITAGSGSSEGPDSRHTAWLGGGSSSRRRGFVTAVNLDNSTVMTQEVDSSPVL
SLVTVRIPQEACHWLVAGTQSGSLLVISAKDLSTWHYLQAVTDAVTSLYFHTHPCCTQRR
SYLLVGTADGILSVYEDSVLLQENGQPVKTLTVGNVNTPLMCLGPSFHSADSRTLWAGCG
TKILSFSVDYDVSKSIDTRPNCVLQQQPPLSGEACVSRMVVDKYVYLSKAGASRVEVWDK
WSERMMEGIDCAHIIRHDSGSRRRSGSRAERPSDASPPWAVVKALLLQSNAALWIGTRGG
YLLLLELPKHQPLQVLALGCDSVRSITSAFIQTLIWKNVVLVLGRRVPQDKNEESVLMVW
NSVLPTEVKDLKKHCEKRERIALRMREQLQQS
NT seq
7659 nt
NT seq
+upstream
nt +downstream
nt
atggtggaccaggaggaactggaggagtggttgaagaaactgctggtgaggctcaagtcc
ccccaggaggaccggcagacgtccacgctgatccagatcatccaggatctgctgtcttta
gcgctcacagagtccgcagctgaactgtttaaagacaaagaagtgcatacgcctctgatg
gttgtgctctccacttacatcagcagcagaagagtccagcaggtgggcttgtccttgttc
tgtcagctgatagagatatgtcccgacacactggagcagctcaccaggcctcttcaggct
tccagagactgggaagtcctggctgtgcaccagcagatcctgaaggtgctgtctcagcac
agcacagactggcgcgtgaccttggttggacttcgggcgctggctttgctgcttacatca
gacctgattcctgctctgctgctggaggaggaagaggatgtctttagcttggcggtgcag
gcgatgaagactttccccaccagtgaggaagttcagtttcatggctgtggagttttgcag
cggctgctgaacacagtcagtgacactcgcctggtggagtttgtggagaaccaggaccac
gatgtggttctctcagctctccaaaggtttccaggaagtccagacgtgctcctgcaggcc
atgaaagtgcttctgcctctggctcgtactgccagtaatgtggaggtgttgatgtcgggg
ggcattcggtgttacagctcagtcatcgccgccatggacgcctttccggatgtggaggag
ctgcaggaggcggcctgctgtctcttcaggaggttcacttcagagagttattacaacatc
ttggtgatcaatggcgtccagacagtgaccgttagagcctgccagcggttctccgacaac
gctgtgctgcaggccgccgccctctcctgcctggctgacctcacttcaaccattgtgcag
aacagagaagtggctgagcagagtctggaggaaggagagccggaggaaaacagaggcaca
gcagaggtggaggacatgggtctgtgctggatggaggactgccgcacagctctggagcgc
cacgcctcggagcccttggttcaggaagctgcatgttgggcaattcatcagctgctcctg
cacagagctcctgtcagccattcagaggagaagctggatgaaaggacgcctgttcacaga
cagctgatggcagccatgttgtttcattcctcctctcccagagtgtttatagcggctacc
agcgccctcgccacgctcgtctccaacaaccgtcgaatgagctctctgctgctttccaga
ggtctccatgtgaacctggtggagatgatgaagagacatgtggactcggctgaggtttcc
aaagctgccttcaagctgttaaagcttctctttcatggacggactacgagtctggatgag
ctgaacatggtcatgggtcagatcctcagcaccatgaaggagcacaacttccagccagag
gtccagctggaggcgctgcagaccagtctggtcttcctgtttccagacaggagcctgagg
gagcacggcgtctctgtgcaggatccagacatggctgacctgtctctcaaagtgctgaaa
aaccagtttgtggtggaaggggctcacactctttacctggaggtcctcaatagattcata
agctacccggccatacagaggtgtggtttgaaagtgctgtctgctctggctgactgctct
ggtgcagtggaccttctgtgccagcagggggcgatagacacagtgctacatacactacag
atgttccccaaggacagagagatacactactggggcctgaccctgctgaactacctggtg
tttaagaagaagctgtccaggatgatcctgcctgttctggcctctgttgtgctctcgtct
ctgactcagttcagaccggactctgagatgctgctgaagagtttccaggtggctgtcagg
atgctggacgcctgctcggatgccgctgctgagctgcaaaaacgagactttgaccgagag
cttttcaaacagctcagaaaggaaagcgatcagagcgccgctccgctgtggaagtcggtg
tgcttggctgtgtctaagatgtggagcaaccccgagctgcactacagcatgctggaaaaa
gcctgcgtggacggagacaccgtcatggcggagtgtctgatcgagatgggtgctgacagc
aacaagaagaccaagaccgagtctctcatttatcaggtgtgtgagaggggtggacctgtg
gagctggtggagctgctgctctgccatggtgcccatgagcagcacatccgcagggcgctg
gcagtgagcgtgaagagggcagacagctccacggtcatccagctgctagcccgtctgggt
ctggatgttaataacggcgccctgtgtctgggcgggctcaggctgggtcgactggaggcg
gcgtggctgagccccctgctggcagacagaggcagaggcttcagtctacgcagcaacaac
agtagaggcatcagtttggcaaggtatattcagtctttccagagatctaagagcatcagc
tgctcctccagactcatgtctgaccagtgtctgacctctgggtacctctctgacgagagt
gatgactccagcttcagcgtggtctccatggaggactgcttgttttataacgaggacctg
gagagtgatggaagtgactccctctcagctgctctggctccaaagtcatgtaaccattca
gcagaggagctgagggcggagcctttcaagaggaaacagggacgtcgcagacatgccagc
gcagaggtgaacgctcaggacgactttagcgcttcgatatctagcgttcacactgagaat
gaaagcagcgagcccgccctcaggaggtacggaaggtctggatccagccatagaatgtgg
ggatctggggaaagttctgctgctctcttcaaagagaaggagcggatccgcctgctggac
ctgaccgggaatgagctggcctctctttcctgtctgacagaggacagctttgtccagcag
cagctggggttccttctccgcctggacctcagtcacaacaatctgacagcctttccctcc
gccgtctgccagaacttgatgagtctgacccgactggacttgcaggggaaccggttagag
tctctgccggacgggctgctgtctctgccctctctgaacacgctcaacgtctctcgtaac
ctcatcggccccacgctaagcttcgaccctgcagtcacctgtccggctctgaagcacctc
aacctctcttttaacaagatctccgctttccctcacgagctgggctgcagcatgcagcag
ttggaggagctgtctctggaaggcaactgcatgacggagctctgcatgcctctgtgtctg
ccagagatcaaacttctggacgtgagcaggaacagtgtagacaacatttgtgcagacttc
ctcatcaactgctccaaactggaacatttcaacgcctccatgaataaaatcagtcacctc
tctcagctgcccatcaaggtcacgacccttagactggcaaacaacaaattcagtcaggtt
cctgaaagcgtcctggaccttccagtcttgcggtctctagacatgcgggccaacaccatc
gatttcctgcctggaccaagcctctgggcctccagcaacattcgagaactcatgttcagt
cagaactgcatccagatcctgaatctgagcggacctgttcacaaatgggccaggctggag
aaactccatctgagtaacaacaacctctccgaggttcctcctcagattgggttgttggaa
ggcctcacgtctctggacgtgagtcacaactcaaacctgcgctccttccccgatgagatg
gggaagctgagcaagctttgggacctgccactggatggcctccggctgcagctggacttc
aaggtcaccggcagcaaaaccaaagacatcatcaggtccctgcagcagcggctgaagaag
gcggtgccgtaccacagaatgaagctcatcgtggtggggaatccaggcagcgggaagacc
acactgatccatcagctgatgaagcagaagcggcagctgaattccagtcagaatgctgct
ggcattcgggtctcagactggaacatcaaggaccgcgataaaaagaaaaggctgctgaat
gtttgggactttacagcaggtggagaggagttgagcggctctcatcttcacttcctcact
cccagagctgtctacctgctggtgtacgacatcagtaaaggagccggtcaggtggatgcc
ctcaaaccctggctctttaccattaaggcggtagctcctctctctccggtcatcctggtg
ggcactcatgccgatgtgagtgatgagctgcacttccaggactgtctgaggaagagcagg
gctgagctgccccaccaccagggcttcccaccaatcagggatcatcacatgggctacttc
tgtcaggactccgactctgttgccaatctccggaaggccatcctgaaggaggtcaccgac
ttcaagatccagggtcagcctgtcatgggccagctggttccagacagctatgtggagctg
gagcgcagacttcttctggagaggaccagaacctctccagagttccccatcctcaggcac
taccagctgctccagctcatccaggagagtcagctgcagctggaggaggcggagcttcca
cacgccgttcatttcctcagtgaagtcgggattttgttgcacttcaatgatcctgcactg
cgccttcaagagctctactttattgacccgcagtggctgtgcaacatcctctctcagaag
ctgaccctaaagagcggcggtctgcgggagcagcccaaaggagtggttcagcgctctgtg
atggaaaagtttctctctgagagcaaacgcttcccaaacagccaccttgagcagtttgtt
aaattgttggagaagtttcagatcgcccttcctttaggggaagaccagctgctggtaccc
agcagtttgtccaagcacagacccgtcattgagctgcctcactgtgagaactccgaggtg
attgtgcggctctacgagatgccatactttcccatggattactggtctcgtcagatctgc
cggcttctggaggtgtcctcctttttgctatgtggacgagacaagatgctgcgacccaat
cgcatctactggaggacaggcatttacctgagctggtctcctgaagcgtactgtctggtg
gaagctgcgtcagaggaaggaagtccctccagcttcgtcagaataactgttcccatgtca
cgaaaaggccgggtgttgctgggtcaggtggtggatcacactgactctgtgctggaggaa
tggtttcctggtctgctcaacactgacatgcacggcaacggagaggctctgatcaagaga
tgggctgtgtacagcttccatgacggacacgagcccagcagaattctgcttgaggatctt
ttcagatacgctgataatgattttctgctggtgaacccagaggatcccgcctgcacggtc
cccatctctctgatcgccccggacctggtgctgagtgaccagcctgcaggaaccatgctg
gacagcgaggagctggacgtcgccctgtccaaagaaaacaggctcggggatggagggttt
ggaacggtttatcggggcgtctacaaaaatgaagaagttgcggtgaagctgttcaacaaa
catgcgtcagagctttatgtctacaggctgctgcgacaggagctggcggtgttgggtcgc
ctccgacaccccagcctggtggggctgctggccgctggctcggctccgcaggtcctggta
atggagttggctctgcggggctctctggattctctctttgaacaccagaacggcagcctg
agtcggaagctgcagcaccggattgccctgcatgtggcagatggactcagataccttcac
tcagctatgatcatctatcgggatctaaagcctcacaacgtcctgctgttcaacctgaag
accggctccgacatcattgtgaaaatcacagactacggcatcgcccagtactgctgcagc
atgggagtgaggagctcagagggcacgccaggtttccgagccccggaagtggctcgcggt
aacgcgatctacaaccagcaggcggacgtgttctcgctgggcctgctgctctacgacctt
ctgacctgcggcgagcggatttcagatggcatgaagttccccagcgagtttgatgaagta
gcagttcaaggaaaactgccagatccggtccagcattacggatgctcaccatggcccggc
tttcaggctctcatgaaggactgtctgagggaaaaccctcaggatcgacccacctctgct
caggtgtttgaccggctgaactcagcagaaatgctgtgtctcatgagggagatccaggac
ccccggctgtccgctgctgaatgtatcactgcaggctctggaagcagcgagggtcctgac
agcagacacacggcctggctgggtgggggtagcagcagccggaggcggggcttcgtcacc
gctgtgaacctggacaacagcacggtgatgacacaggaagtggactccagcccggtcctg
tcccttgtgacagtccggatcccacaggaggcctgtcattggctggttgctgggacacag
tcgggctccttgctggtgatcagcgccaaagacctttccacatggcactacctgcaggct
gtgactgatgccgtcacctccttatacttccacacccacccttgttgcacccaaagaaga
agctaccttctggttgggacggcagatgggattctcagtgtttatgaggactctgtgctc
ctgcaggaaaacggtcagcccgtcaaaaccctcactgtaggaaacgtcaacaccccactc
atgtgtctgggcccgtccttccattcagctgactccagaactctgtgggccggctgcggg
accaagatcctgtccttttctgtggactatgatgtctccaagtccatcgacaccagaccc
aactgtgtccttcagcagcagccgcctctgagtggcgaggcgtgtgtgtctcgcatggtt
gtggacaaatacgtctacctgagtaaagcgggagcatcacgcgttgaagtctgggacaag
tggagtgagaggatgatggagggcattgactgtgctcacatcatcagacacgactcaggc
agcagacgcaggtcgggcagccgagccgaacggccctctgacgcctcgccgccctgggcc
gtggtcaaggctctgctgctgcagagcaatgcagcgctctggatcggcactagggggggc
tacctgctgctactggagctacccaaacaccagccgctgcaggtcctggcgctgggctgc
gactcggtccgctccatcacctcagcgttcatacagacgctaatctggaagaatgtggtg
ctggttttgggccgaagagtcccacaagacaagaatgaggagtctgtgctgatggtgtgg
aacagcgtgttgcctacggaggtcaaagacttgaagaagcactgtgagaagagggaacgc
atcgcactgagaatgagagagcagctccagcagtcctga
DBGET
integrated database retrieval system
