Oryzias melastigma (Indian medaka): 112152468
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Entry
112152468 CDS
T07439
Symbol
snupn
Name
(RefSeq) snurportin-1
KO
K13151
snurportin-1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112152468 (snupn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112152468 (snupn)
Spliceosome [BR:
oml03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
112152468 (snupn)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SPN1_m3Gcap_bd
Snurportin1
mRNA_cap_enzyme
APC_u14
Motif
Other DBs
NCBI-GeneID:
112152468
NCBI-ProteinID:
XP_024137839
Ensembl:
ENSOMEG00000004853
UniProt:
A0A3B3BFT9
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Position
LG6:10445215..10455909
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AA seq
373 aa
AA seq
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MDDLTRALSTSFAVSQEPNSTAAPHPRLSQYKSKYSVLEQSERRRRFLDFQKSKRLNYVN
HARRLASGDWTGADSDGEEDMDKQDEGEQNKGGETEDEGMEIEKRKLPKHYANQLMLSEW
LVDVPSELDTDWLLVVCPVGKRSLIVASKGSTAAYTKSGYCVNRFPSLLPGGNRHNSAMG
KDYTILDCIYSEVDRTYYILDVMCWRGHPVYDCPTEFRFFWLQSKVQETEGLSETAKRNP
FRFVSLQSSDCTAASIQKALAAEYSFSVDGLLFYHRQTHYTPGSTPLVGWLRPYMVADIL
GVAVPEGPLTTKPEYANHQLQQILQHKKPSSEVRPADQSGGYELEYLSTPQLDSEKTLSL
AGQKPIREATMEV
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcttacccgagctctctcgaccagctttgctgtgtcccaggagcccaacagc
accgccgccccccatcctcggctcagtcagtacaagagcaagtacagcgttctggagcag
agtgagcgccggcggcgctttcttgactttcaaaaaagtaaaagattaaactatgtcaac
catgcgcggcgcttggccagcggggactggaccggagcagacagcgatggagaggaagac
atggacaaacaagatgaaggcgagcagaacaaggggggtgagacagaagatgagggcatg
gagatcgagaagaggaagctgccaaagcattatgcaaatcagctcatgctgtcggagtgg
ctggtggacgtaccgtcggagttggacacagattggctgttggtggtctgtcctgtcggg
aagagatctctcattgttgcctccaaggggtccactgcagcgtacaccaaaagcggctac
tgtgtgaaccgcttcccctccctgctgccgggtgggaacagacacaactccgccatggga
aaagattataccatcttggactgcatttacagcgaggtggacagaacctactacatcctg
gatgtcatgtgctggagaggccatccggtctacgactgcccgacagagttccggttcttt
tggctccagtctaaagtccaggagacggaggggctgtcagagactgccaaacgtaatcct
ttccgctttgtgagtctacaaagttctgactgcacggcagcgtccattcagaaagctttg
gctgcagaatacagctttagtgtggacggacttctcttctatcaccgacagactcactac
acacccggcagcacgcctttggtcggctggctccgcccttacatggtggcagacatcctg
ggcgtggcggttcccgaaggacccctcaccaccaaaccagaatacgccaaccatcagctg
caacagatcctacaacacaagaagccctccagcgaggtccggcccgccgaccagagcgga
ggctacgagttagagtacctgtccactcctcagctggacagcgagaagactctgagcctc
gcggggcagaaaccgatacgagaagcaaccatggaggtctga
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