KEGG   Oryzias melastigma (Indian medaka): 112152468
Entry
112152468         CDS       T07439                                 
Symbol
snupn
Name
(RefSeq) snurportin-1
  KO
K13151  snurportin-1
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    112152468 (snupn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oml03041]
    112152468 (snupn)
Spliceosome [BR:oml03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    112152468 (snupn)
SSDB
Motif
Pfam: SPN1_m3Gcap_bd Snurportin1 mRNA_cap_enzyme APC_u14
Other DBs
NCBI-GeneID: 112152468
NCBI-ProteinID: XP_024137839
Ensembl: ENSOMEG00000004853
UniProt: A0A3B3BFT9
LinkDB
Position
LG6:10445215..10455909
AA seq 373 aa
MDDLTRALSTSFAVSQEPNSTAAPHPRLSQYKSKYSVLEQSERRRRFLDFQKSKRLNYVN
HARRLASGDWTGADSDGEEDMDKQDEGEQNKGGETEDEGMEIEKRKLPKHYANQLMLSEW
LVDVPSELDTDWLLVVCPVGKRSLIVASKGSTAAYTKSGYCVNRFPSLLPGGNRHNSAMG
KDYTILDCIYSEVDRTYYILDVMCWRGHPVYDCPTEFRFFWLQSKVQETEGLSETAKRNP
FRFVSLQSSDCTAASIQKALAAEYSFSVDGLLFYHRQTHYTPGSTPLVGWLRPYMVADIL
GVAVPEGPLTTKPEYANHQLQQILQHKKPSSEVRPADQSGGYELEYLSTPQLDSEKTLSL
AGQKPIREATMEV
NT seq 1122 nt   +upstreamnt  +downstreamnt
atggatgatcttacccgagctctctcgaccagctttgctgtgtcccaggagcccaacagc
accgccgccccccatcctcggctcagtcagtacaagagcaagtacagcgttctggagcag
agtgagcgccggcggcgctttcttgactttcaaaaaagtaaaagattaaactatgtcaac
catgcgcggcgcttggccagcggggactggaccggagcagacagcgatggagaggaagac
atggacaaacaagatgaaggcgagcagaacaaggggggtgagacagaagatgagggcatg
gagatcgagaagaggaagctgccaaagcattatgcaaatcagctcatgctgtcggagtgg
ctggtggacgtaccgtcggagttggacacagattggctgttggtggtctgtcctgtcggg
aagagatctctcattgttgcctccaaggggtccactgcagcgtacaccaaaagcggctac
tgtgtgaaccgcttcccctccctgctgccgggtgggaacagacacaactccgccatggga
aaagattataccatcttggactgcatttacagcgaggtggacagaacctactacatcctg
gatgtcatgtgctggagaggccatccggtctacgactgcccgacagagttccggttcttt
tggctccagtctaaagtccaggagacggaggggctgtcagagactgccaaacgtaatcct
ttccgctttgtgagtctacaaagttctgactgcacggcagcgtccattcagaaagctttg
gctgcagaatacagctttagtgtggacggacttctcttctatcaccgacagactcactac
acacccggcagcacgcctttggtcggctggctccgcccttacatggtggcagacatcctg
ggcgtggcggttcccgaaggacccctcaccaccaaaccagaatacgccaaccatcagctg
caacagatcctacaacacaagaagccctccagcgaggtccggcccgccgaccagagcgga
ggctacgagttagagtacctgtccactcctcagctggacagcgagaagactctgagcctc
gcggggcagaaaccgatacgagaagcaaccatggaggtctga

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