Oryzias melastigma (Indian medaka): 112152474
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Entry
112152474 CDS
T07439
Name
(RefSeq) paired box protein Pax-6
KO
K08031
paired box protein 6
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112152474
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
112152474
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_23
Homeobox_KN
HTH_Tnp_IS1
HTH_SB
DUF6115
Motif
Other DBs
NCBI-GeneID:
112152474
NCBI-ProteinID:
XP_024137847
Ensembl:
ENSOMEG00000020736
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All DBs
Position
LG6:439028..466619
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AA seq
433 aa
AA seq
DB search
MPQKDYRSPASWETGVASMMQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCD
ISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVTKIAQYKRECPSIFAWE
IRDRLLAEGVCSNDNIPSVSSINRVLRNLASDKQQMGSLGTEGMFDKLKMLNVHTSWGGR
SSWYAGTTLSSTECPQAEGRENSISVNSNTEDSEETQMRLQLKRKLQRNRTSFTQDQIEA
LEKEFERTHYPDVFARERLANKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQISSSGSH
IPISSSFSSSAYQPLPQPAAPVSFSSGSMLGRSDPALSNSYSLPTMPSFSMAASLPMQAS
SQTSYSCMLPTSPTVNARSYDTYTPPHMQPHLSSQSMTSSATSSTGLISPGVSVPVQVPG
SEADMSQYWPRLQ
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgccccagaaagactacaggagtccagccagctgggagaccggggtggcctccatgatg
cagaacagtcacagcggggtcaaccagctcgggggagtatttgtgaacgggagacctctg
cccgactccaccaggcagaagatcgtggagctggcccacagcggcgctcggccgtgtgac
atatccagaatccttcaggtgtccaatggctgtgtgagtaagatcctgggccgatactac
gagaccggatccatccgtccccgggccatcggagggagtaaacccagggtggccaccccg
gaggtggtcacaaagattgcccagtacaagagagagtgcccgtccatctttgcctgggag
atcagagaccggctgctggcggagggcgtctgctccaacgacaacatccccagcgtctcc
tcgataaaccgagtcctcaggaatttagccagtgacaagcagcaaatgggctcgttggga
acagaagggatgtttgacaaactcaagatgctcaacgtgcataccagttggggggggcgc
tccagctggtatgccgggaccacgctctcctccacagagtgtccgcaggcagaaggaaga
gagaacagcatctcagtgaattccaacacagaagactccgaggagacgcagatgaggctt
cagctgaagaggaagctgcagaggaacagaacctcgttcactcaggaccaaatagaagcg
ctcgagaaagagtttgaaaggactcactacccagatgtgttcgctcgtgagcgtctcgct
aacaaaatagaccttcctgaagccaggatacaggtttggttttccaacagacgagcaaag
tggagaagagaggagaagttgcgaaatcaacgccggcagatatccagctccggcagccac
attcccatcagcagcagcttcagctcctccgcctaccagcctctcccccaacctgccgca
ccagtgtcgttttcttcgggctccatgttgggaaggtcagatcccgctctgtccaacagc
tacagcctcccaaccatgcccagcttcagcatggccgccagcctgcccatgcaggcgtcc
agtcagacgtcttattcctgcatgctgcccaccagccccactgtcaacgctcgaagctac
gacacgtacacccccccacatatgcagcctcacctcagcagccagtctatgacttcctct
gccacgtcgtcgacaggtctgatctctcctggcgtctctgtgccggtccaagttccagga
agcgaagcagacatgtcacagtactggccccgcctgcagtga
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