KEGG   Oryzias melastigma (Indian medaka): 112152486
Entry
112152486         CDS       T07439                                 
Name
(RefSeq) cullin-1
  KO
K03347  cullin 1
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04110  Cell cycle
oml04114  Oocyte meiosis
oml04120  Ubiquitin mediated proteolysis
oml04141  Protein processing in endoplasmic reticulum
oml04310  Wnt signaling pathway
oml04340  Hedgehog signaling pathway
oml04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    112152486
   04120 Ubiquitin mediated proteolysis
    112152486
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    112152486
   04340 Hedgehog signaling pathway
    112152486
   04350 TGF-beta signaling pathway
    112152486
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    112152486
   04114 Oocyte meiosis
    112152486
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oml04121]
    112152486
Ubiquitin system [BR:oml04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Cullin
     112152486
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 IntS11_C
Other DBs
NCBI-GeneID: 112152486
NCBI-ProteinID: XP_024137882
Ensembl: ENSOMEG00000006238
LinkDB
Position
LG6:complement(11322621..11346261)
AA seq 777 aa
MMSSNRTQNPHGLKQIGLDQIWDDLRAGIQKVYTRQSMPKSRYMELYTHVYNYCTSVHQS
SQGRGSVPPAKPSKKSTTPGGAQFVGLELYKRLKEFLKNYLTSLLKDGEDLMDECVLKFY
TQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRECLFRPLNKQV
TNAVLKLIERERNGETINTRLISGVVQSYVELGLNEEDAFTKGPTLSVYKEYFECQFLTD
TERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESSQDELARKCEQVLIEKH
LEIFHTEFQNLLDADKNEDLGRMYNLVSRITDGLGELKKLLETHIHNQGLAAIEKCGEAA
LNDPKVYVQTTLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTRMAQSSSKSP
ELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNS
ASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLSNSEPLDLDFSIQV
LSSGSWPFQQSCTFALPTELVRSYQRFTSFYGSRHSGRKLTWLYHLSKGELVTNCFKNRY
TLQASTFQMAILLQYNTEDSYTVQQLTDSTQIKTDILIQVLQILLKSKLLVLEDENANVD
EVDFKPDTVIKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIM
KMRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA
NT seq 2334 nt   +upstreamnt  +downstreamnt
atgatgtcttcaaacagaacccagaacccccacggactgaaacagataggcctggaccag
atatgggacgacctgcgggccggcatccagaaggtgtacacgcggcaaagcatgcccaag
tcacgctacatggaactctacacacatgtatataactattgtaccagcgtccatcagtcc
agccagggccgcggatctgtgcctccagcaaagccctccaaaaagtccactaccccaggt
ggggctcagtttgtgggcctggagctctacaagcggctcaaggagttcctaaagaactat
ttgacgagtctactcaaggatggagaggacctgatggatgagtgcgtgctgaagttttac
acacagcagtgggaggactatcgcttctctagtaaggtcctaaacgggatctgtgcctac
ctcaaccgccactgggttagacgggagtgtgacgagggacgaaagggcatctatgagatc
tactcgctggccctcgtaacctggagggagtgtttgttccggcccctcaacaagcaggta
acaaacgcggtcctgaagctgatcgagagagagagaaacggagagactatcaacaccaga
ctgatcagtggagttgtccagtcttacgttgagctgggtctgaatgaggaagacgccttc
accaaaggccccacactctccgtctacaaggagtactttgagtgccagttcctcaccgac
acagaacgcttctacacgcgtgagagcaccgagttcctgcagcagaacccggtcacagag
tatatgaagaaggcggaggcgcggctgctggaagagcaacggcgcgtgcaagtttacctc
cacgagtcctctcaggacgagctggccaggaagtgtgagcaggtcctcatcgagaaacac
ctggagattttccacacagagtttcagaacctgctggatgcagacaagaacgaagatctg
ggtcggatgtacaacctggtgtcgcggatcactgacggtctcggtgaactgaagaagctc
ctggagactcacatccacaatcaaggcctggccgccatcgagaagtgtggagaagccgcg
ctaaatgaccccaaagtttacgtccagaccacgctggacgtccacaagaagtataacgcc
ctggtcatgtctgcgttcaacaacgacgctggcttcgtggcggcacttgataaggcatgt
ggacgcttcatcaacaacaacgctgtcaccaggatggctcagtcatccagcaagtctcca
gagctgctggccagatactgcgactctctgctgaagaagagctccaaaaacccagaggag
gcagaactggaggacacgctcaaccaagtgatggttgtcttcaagtacatcgaggacaaa
gacgttttccaaaagttttatgccaagatgctagccaagcgcctggtgcatcagaacagc
gccagtgacgacgccgaggccagcatgatctccaaactcaagcaagcatgcggcttcgag
tacacgtccaaactgcagcgcatgttccaggacatcggagtcagcaaagacctgaacgag
cagttcaagaaacacctgagcaactcggagcctctggacttggacttcagcatccaggtt
ctgagctctgggtcttggccgttccagcagtcctgtacctttgctctacccacagagttg
gtgaggagttaccagcgcttcacgtcgttttatggcagcagacacagcggcaggaagctg
acctggctctatcacctgtccaaaggagagctggtcaccaactgcttcaagaacaggtac
accctccaggcctccaccttccagatggccatcctgctgcagtacaacaccgaggacagc
tacacggtgcagcagctgaccgacagcacacagatcaaaactgacatcctgattcaggtt
ctgcagatccttttaaagtccaagctgctggttttagaggatgagaacgccaacgtggac
gaggtggacttcaaacccgacaccgtcatcaagcttttcctgggatacaagaataagaag
ctgagggtgaacattaacgttccaatgaagactgagcagaaacaagagcaggagacgacc
cacaagaacatcgaggaggacaggaagctcctcatccaggctgctatagtgaggatcatg
aagatgaggaaggtcctgaagcatcagcagctcctggctgaggtcctgaaccagctgtcg
tctcggtttaaacccagagttcccgtcatcaagaaatgcatcgacatcctgatagagaag
gagtacctggagcgagtggatggagagaaagacacatacagctacctggcctga

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