Oryzias melastigma (Indian medaka): 112152536
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Entry
112152536 CDS
T07439
Symbol
tbc1d2b
Name
(RefSeq) TBC1 domain family member 2B
KO
K20166
TBC1 domain family member 2B
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112152536 (tbc1d2b)
Membrane trafficking [BR:
oml04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
112152536 (tbc1d2b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
XLF_CC
PH_8
PH_11
Motif
Other DBs
NCBI-GeneID:
112152536
NCBI-ProteinID:
XP_024137952
Ensembl:
ENSOMEG00000022540
LinkDB
All DBs
Position
LG6:complement(18330345..18346462)
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AA seq
963 aa
AA seq
DB search
MHEEEDGGEASLCSGPRLVPFKSVDDAELEGGKEQASRLCGYLSKLSGKGPLRGFKPRWF
VYDPRKCYLYYFKTPQDALPLGHIEIGDACFSYNVEGEEGQFAVCTAEKEFLLKAPSRQV
MHYWLQQLQQKRWEFSNARGSGHRDSWSSPTMAFPPTGLVGKDNDALVFENPGESMEKVR
SDFAMETEMGVEGMVGIHSARGPSAAGNNTLNFSLKNLGTELRNSMSYLRSGRLVDHRRS
VFYTGGSNATEDWEMLDAPSKDFSEHKHQHDTHRRFTFDFGRSSTRSKRPLLRDLMAPGK
SARSPDHSPVECNGSKSLELQLCLQNQQVELNQMQQEQLKLREELVAQKEMVRLLQQTLR
TSQCERPAVCSRAPDPNAASEQSQPSALTQEEAAQLMARLQERDEQIPTLCGHMERLSLE
KESLQQELKALKIKVGEMNDQLGMLMETIQAKDEVIMKLSQQSSEETGNSNGPGSPQAHK
EQQELDLLKDSLQGYKSQNKFLNKEILELTVLRRNAESREKAFEAKCTALEAKLCQVESK
YLVLLQEVKNPVCSTQEQNPASEVISRLLEDALQVESPDPQDHPIFKPNTVSEYDIYGFK
TVPEEEEEEERLVAKVRALELKSLSMTDQEVSVGVKWENFLASTMNRDLVRSPELKSLIR
CGVPHQHRSKVWRWCVSFHVKKFRDHLAPDYYETLLNVAREKPNPASKQIELDLLRTLPN
NKHYASPSAAGIQKLRNVLLAFSWRNPDIGYCQGLNRLAAITLLYLDQEDAFWTLVAIVE
VFMPRDYYTKTLLGSQVDQRVFKDLMSEKLPRLHAHFEQQKVDFSLITFNWFLVVFVDSV
VSDILFKIWDAFLFEGPKIIFRFALALFKHKEEEFLKLHDSTATFKYLRYFTRTILDSRK
LMNIAFGDMNPFPMRQIQNRRAFHLEKVRLELTELEAIRQTFLRERETSQDRRSFVSDDE
EEN
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaagaggaggatggcggggaggcgagcctctgctcgggcccccggctggttccc
ttcaagtccgtggatgacgccgagctagaaggcgggaaggagcaggcctccagactctgc
ggatacttgagcaaactgtccggcaagggacccctgaggggcttcaagccgcggtggttc
gtgtacgacccgaggaaatgttacttgtattacttcaagactccccaggatgcattgccg
ctcggacacatcgaaataggcgatgcgtgcttcagctacaacgtggagggagaggagggt
caatttgcggtctgcacagccgaaaaagagttcttactgaaggcccccagccggcaagtg
atgcactactggctccagcagctgcagcagaaacgctgggagttcagcaacgcccgaggc
agcggtcatagagacagttggagctcccccaccatggcgtttccccccaccggcctcgtt
ggcaaagacaatgacgcgctggtcttcgagaatcctggtgagagcatggagaaagtccgc
agcgacttcgccatggaaacggagatgggtgtggaaggcatggtggggatccactcagcc
agagggccgtctgctgcgggcaacaacaccctcaacttctccctgaaaaacctgggcaca
gaactcaggaactccatgtcttacctgcggtccggcagactggtcgatcacagacggagc
gtgttttacaccggcggcagcaacgccacggaggactgggagatgttggacgctccatcc
aaggacttctcagagcataaacatcagcatgacacacacagacgtttcacctttgacttt
ggacgcagctccacgcggtctaagaggcctctgcttcgagacttaatggctcccgggaag
tcagcgcgcagccccgaccactccccagtggaatgcaacggcagcaaatctttggagctg
cagctctgtctccagaaccagcaggtggaactgaaccagatgcagcaggagcagctgaaa
ctccgggaggaactggtcgcacagaaggagatggtccggcttctccagcagactctgaga
acctcacagtgtgagagaccagcagtttgctcccgagcccccgacccaaacgccgcctca
gaacaaagccagccatcggctctgacacaagaggaagctgcacagctgatggcccggctt
caggaaagagacgaacagattcccactttgtgtggccacatggagcgcctctccctggag
aaggagagcctgcagcaggagctgaaggccctaaaaatcaaggtgggggagatgaacgac
cagctgggaatgctgatggagaccatccaggcgaaagacgaggtgatcatgaagctgtcg
cagcaaagctcggaggagacgggaaactccaacgggcccgggtcaccacaggctcacaaa
gagcagcaggagctggacctcctcaaggacagtctacaaggttacaaatcgcagaacaag
tttctgaacaaagagatcctggagctgacggtgttacggagaaacgcagagagccgagag
aaagctttcgaagcaaagtgcacggcgctggaggccaagctctgccaggtggagagcaaa
tacttggttttgctccaagaggtgaagaacccagtgtgttcgacgcaggagcagaacccg
gccagcgaggtcatctccagactgttggaggacgctctgcaggtggagagcccagacccg
caggatcatcccatcttcaaaccgaatactgtcagcgagtatgatatttacggctttaag
acggtccctgaagaggaggaagaggaggagcggctggttgcaaaggtgcgagccttggag
ctgaagtcgctgtccatgacggatcaggaggtgtccgtcggggtcaagtgggagaacttc
ctggccagcaccatgaaccgagacctggtgcgctcgcctgagctgaagagcctgatccgc
tgcggcgtgccccaccagcaccgctctaaagtgtggcggtggtgcgtctccttccacgtc
aagaagttccgggaccacttggctccagactattatgagacgttgctgaatgtggcacga
gagaagcccaacccggcctccaagcagatcgagctggacttgctacgtactttgcccaac
aacaagcactacgcctcgccgagtgcggccggtatccagaagctcaggaacgtgctgctg
gctttctcctggaggaatccggacatcggttactgccagggcctgaacaggttagcagcc
atcactctactctatttagatcaggaggatgctttctggaccctggtggccatcgtggaa
gtcttcatgccaagagattattacaccaagaccctgttgggctcacaggtggaccagcga
gtgttcaaagacctgatgagcgagaagcttccacgtctacacgctcactttgagcagcaa
aaggtggatttctccctcatcaccttcaactggtttctggtggtgtttgtggacagtgtg
gtgagcgacatcctcttcaagatctgggatgcctttttgttcgaaggaccaaagatcata
tttcgttttgctctggcgctctttaaacacaaagaggaggagtttttgaagctgcacgac
tccaccgccaccttcaaataccttcgatacttcacacgcactatcctggattcaagaaag
ctgatgaacattgcatttggggacatgaacccattccccatgagacagatccagaaccgc
cgagcctttcacttggaaaaggtccgtctggagttgacggagctggaagccatccggcag
accttcctcagggagagggagaccagccaggacaggcggagcttcgtcagcgatgacgag
gaggaaaactga
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