Oryzias melastigma (Indian medaka): 112152542
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Entry
112152542 CDS
T07439
Name
(RefSeq) contactin-associated protein-like 4 isoform X1
KO
K24337
contactin associated protein-like 3/4
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112152542
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
112152542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
EGF
F5_F8_type_C_2
PMP1_2
Motif
Other DBs
NCBI-GeneID:
112152542
NCBI-ProteinID:
XP_024137964
Ensembl:
ENSOMEG00000000057
LinkDB
All DBs
Position
LG17:complement(33118209..33321896)
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AA seq
1308 aa
AA seq
DB search
MALRSKGVFWIISRLALLLSCSGTSAGADGCDSALLSNLPPSSFRSSSQLSSSHAAGFAK
LNRRDGAGGWSPLISDSYQWLEVDLGERTKITAVATQGRYGSSDWLTSYLLMFSDTGHNW
KQYRQEDSLGSFPGNSNADSVVQHKLQQPAVARFLRLIPLDWDPSGRIGLRVETYGCPYT
SDVVSFGGDGVSGLMFRPSAGLKQKSKEVVSLEFKTMKNSGMLLHAEGQHGFSLSLELER
GKLLLLLRQASSPSPEPQRLASLGSLLDDQHWHHVALEQKHSHLNLSVDKHVERIHIPLL
SNWSIRQLSVGASQRPNFFKENFHGCLENLLYDDLNLIELSKHRDPQTALQGNVSFFCPE
PTSVAVTFPEHQSFLQLPWSTSLPSGTLSIGFQFRTWNKAGLLTTFDLPQQKGVVWLYLS
EARLCLQIHKAGKKLLELSAGSALNDGQWHSIAVISRLGHLTVSVDKDKGGVAHTTSPVP
VNIDNQIFFGGCPGEGQKQECRNPFEGFQGCMRLISLDNQLVNLIAVQQRLLGNYSQLQI
DMCGITDRCSPSHCEHGGVCTQSWTAFQCNCSDSGYSGATCHSSVFEPSCEAYKHNGNTS
GYFHIDVDGSGPIKPQLVYCNMTEENTWLVIQHNNTELTRVRPSPGVNQQAVRFQYSAEE
EQLLAVIHQSEHCQQELSYRCRKSRLLNTQEGSPFSWWLGGPSPGRVQTYWGGAHPGSRQ
CACGLQGNCVDLQHYCNCDADRGEWSEDSGLVTHKGNLPVRSLVLGDVQRPGSEAAYRVG
PLRCRGDENFWNAAFFDKETSYLHFPTFHGELSADISFLFKTTASSGVFLENLGIKDFIR
IELSSSTQVVFSFDVGNGPLDVSVNSSIPLNDNRWHRVRAERNVKEASLRLDELPVVVQK
APADGHFHLQLNSQLFIGGTASRQKGFRGCIRSLQLNGATLDLEERAKITPGVRPGCPGH
CSSYGSLCHHQGRCVERDNGFHCDCSQSAYSGVFCHTEVSAVFKPETSISYIFKEPFEFS
RNSSASPPSLHSTMAPKGEDISLSFRTTQSPALLLLVTAVRRQFLTLLINKHDLLEVRYK
LDSSREAEVLRSSGRSLADGQLHSLHIRRLTDSVSVQVDQTPREEFNLTSYGEFLDIRAL
VLGRVQGFEDLDPDLTRFGSLGFSGCLSVVRFNSITPLKAALLHPDTSPVVISGPLVQSS
CGSAASANPYAAENTHRLSDDPGSMGSGQPLVNAMKTDSVLIGGVIAVVIFVVVTILAIT
ARVLYRRKETYRSQEVKEVKQEDSQDFHYNNQADSQNVSRENPKEFFL
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggctttgaggagtaaaggagtcttttggattatctctcggctcgcgctgctgctctcc
tgcagcgggacatccgcaggagcagatgggtgtgacagtgctctgctgtccaacctgcca
ccatcatccttcagaagctcctcccagttgtccagtagccatgcagcgggtttcgccaaa
ctcaaccgaagagacggagctggaggctggtctcctcttatctcagacagttatcagtgg
ctggaggtcgaccttggcgagcggaccaagatcaccgctgtggccacgcaggggcgctac
ggcagctctgattggctgacgtcctacctgctgatgtttagcgacacgggccacaactgg
aagcagtaccgacaggaggacagtctggggtcttttccaggaaacagtaatgccgacagc
gtggttcagcacaagctgcagcagcccgccgtcgcccgcttcctgcgcctcattcctctg
gactgggatcccagcgggcgcatcggactccgggtggaaacctacggatgcccctacacc
tctgatgtggtcagctttggcggcgacggcgtcagcggcctgatgttcaggcccagcgcc
ggactgaaacagaaatccaaggaggtcgtctccctggagtttaaaaccatgaagaattct
gggatgctgctgcatgcagagggacaacatggattcagcctcagtctggaactggagaga
ggaaagctgctgctgctgctcagacaagccagcagtccatcccctgagccccagcgtctg
gcctccctcggcagtctgctagacgaccagcattggcaccatgtggcgctggagcagaaa
cactcccacctgaacctcagcgtggacaaacacgtggagagaattcacatccctctgctc
agcaactggagcatcagacagttgagtgtcggggcctcacagaggccaaacttcttcaag
gagaacttccacggctgcttagaaaacctgctttatgacgacctcaacctgatcgagctg
tccaaacacagagacccacaaactgccctgcagggtaatgtgagtttcttctgtcctgag
ccgacttctgttgccgtgacgttccccgagcaccagagcttcctccagctgccgtggtca
acatcattgccatctgggactttgtccatcggattccagttcaggacgtggaacaaggcg
gggcttctaaccacctttgacctccctcagcagaaaggagtggtctggttgtacctcagt
gaggccagactctgcctccaaatacataaagcaggcaaaaaactgttggaactcagcgct
ggctctgctttgaatgacggtcagtggcactccatagctgttatctcaagactcggtcat
ctgacagtctctgtggataaagacaaaggcggcgtcgctcacacgacctcaccggtacca
gtcaacatagataaccagattttctttggaggttgtcccggtgaaggccagaagcaggaa
tgcagaaacccttttgaaggtttccagggttgcatgcgtctcatttccttggacaaccaa
ttagttaacctgatcgcggtccagcaaagacttctgggaaactacagccaactgcagatc
gacatgtgtggcatcactgacaggtgttctcccagtcactgtgaacacggcggcgtctgc
actcagtcctggacggccttccagtgtaactgctcagacagcggctacagcggagcgacc
tgccacagctcggtgttcgaaccgtcctgcgaagcctacaaacacaacggcaacacgtcg
gggtattttcatattgacgtggacggcagcgggccgatcaaaccccagctggtctactgc
aacatgacagaggaaaacacctggttggtgatccagcacaacaacaccgagctgaccaga
gtgcgtccgtctcccggtgtaaaccagcaggcagtacgcttccaatactcggctgaggag
gagcagctcctggctgtcatccaccaatcagagcactgccagcaggagctgtcataccgc
tgcaggaagtcccgcctcctcaacactcaagagggctctccgttcagctggtggctcggt
ggtcccagtcccggtcgggtccagacttactggggaggggctcatccaggcagccggcag
tgtgcctgcggcctgcagggcaactgtgtggacctgcagcactactgcaactgtgacgcc
gaccgcggcgagtggtctgaagattcaggactggtcacccacaaagggaacctcccggtg
cggtccctggtgctgggtgatgtccagaggccgggctcagaggcagcctacagagtggga
cctctccgttgccgtggcgacgaaaacttctggaacgcggcgttcttcgacaaggagacg
tcgtaccttcacttccccacctttcacggagagctgagcgccgacatctcctttctcttt
aaaaccacggcctcctccggggtgttcctggaaaacctgggcatcaaagacttcatccgc
atcgagctgagctcctccactcaggttgttttctcgttcgatgttgggaatggcccgctg
gatgtttcggtcaactccagcatccccctgaacgacaaccggtggcatcgggttcgagcc
gaacgcaacgtcaaagaggcctcgcttcgactggatgaacttcctgtggttgtgcagaag
gcgccggctgacggacacttccacctacagctcaacagccagctgttcataggaggaaca
gcgtccagacagaagggcttccgcggttgcatccgctctctgcagctgaacggcgccact
ctggacctggaggagagagccaagatcacgccgggggtccggcccggctgcccgggtcac
tgcagcagctacggctcgctctgccaccaccagggccgctgcgtggagagagacaacggc
ttccactgcgactgcagccagtcggcttacagcggagtcttctgccacacagaagtttca
gccgtcttcaagcctgaaacatccatcagctacatcttcaaggagccttttgagttcagc
cggaacagcagcgcttcacccccctccctccactccaccatggcaccaaagggggaggac
atctctctgagcttcaggacgacccagagtccggctctgctgctgctggtcaccgccgtc
cgcagacagttcctgactctgctcatcaacaagcacgaccttctggaggtgagatacaag
ctggacagcagccgagaagctgaagtgctgaggagcagtgggaggagtctggctgacgga
cagctgcactcacttcacatcaggaggctgacggactctgtgtctgtgcaggttgatcaa
actcccagagaggagttcaacctcacttcctacggagagttcctggacatccgggctctt
gttctgggccgagtgcagggttttgaggacttggatccagacctgacccggttcgggtcc
ctgggttttagcggttgtctgtcagtggttcgctttaactccatcacccccctgaaggcg
gctcttctgcatccggacaccagccctgttgtcatctccggacctttagtgcagtccagt
tgtggttctgcagcttctgccaacccatatgcagctgagaacacacaccgcctgtcagac
gatcccggctcgatgggctcaggccaacctttagtcaacgccatgaagacggactccgtt
ctgattggaggtgtcatagctgtggtcatctttgtggtggtgaccatcctggccataact
gcccgagtcctgtaccggaggaaagagacgtaccgcagccaggaggtgaaggaggtgaaa
caggaagacagtcaggatttccattacaacaaccaggctgactcccagaacgtctccagg
gaaaaccccaaagagttcttcctgtaa
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