Oryzias melastigma (Indian medaka): 112152566
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Entry
112152566 CDS
T07439
Symbol
nup93
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112152566 (nup93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112152566 (nup93)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112152566 (nup93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
112152566
NCBI-ProteinID:
XP_024137993
Ensembl:
ENSOMEG00000020283
UniProt:
A0A3B3DVJ8
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Position
LG6:30373658..30412700
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AA seq
820 aa
AA seq
DB search
MDAEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTPHDAADVKA
SILLGSRGLDIFHISQRLETLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRR
TFLVAEEYHRESMLVQWEQVKQRVLHTLLGAGEDALDFSQDVEPSFVSEVTTPGRSALDS
VEVAYARQIYIFNEKIVNGHIQPNLGDLCASVADSLDDKNVSDMWLMVKQMTDVLLVPAK
DTLKSRTSVEMQMAFVRQALNFLENSYKNYTMVTVFGNLHQAQLGGVPGTYQLVRSFLNI
KLPGPLPGMQDGEVEGHPVWAVIYYCLRCGDLNAAMQVVNRVQHQLGDFKSWFQEYMTSP
DRRLCPTSENKLRLHYRRVLRNSADPYKRAVYCVIGKCDINDNHGEVADKTEDYLWLKLN
QVCFDDDGSSSPQDRLTLPQLQKQLLEDYGESHFSASQQPFLYFQVLFLTAQFEAAVAFL
FRVERLRCHAVHVALVLYELRLLLKSSGQSAQLLSQEPGDPPMIRHLNFIRLLMLYTRKF
ESTDPREALQYFYFLRNEKDSQGENMFMRCVSELVIESREFDMLLGRLEKDGSRKPGVID
KFAGDTRAIISKVALEAENKGLFEEAVRLYELAKNPDKVLELMNRLLSPVIAQVSAPQSN
KERLKNAAVAIAERYRSQGIAGEKAVDSTFYLLLDLMTFFDEYHAGHVDRAYDIMERLKL
LPLSQESVEERVAAFRNFSDEVRHNLSEVLLATMNILFTQYKRLKGAPAGTPGRPQRSLE
DRDVHLRAQARALITFAGMIPYNMAGDTNARLVQMELLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagaaggatttggggagcttctgcagcaggcagagcagctggctgcagaaacc
gaggctgtgtcagagctgcctcacgttgaaaggaaccttcaggagatccagcaagccggg
gagaggcttcgatcccgcacgctcacccgcactccccatgatgcggcagacgtaaaagcg
tcaatccttcttggttcaagaggtttagacattttccatatttcccagagactggagact
ctaagtgctgccacaacgtttgagcctctggagccagtcaaagacacggatatacagggc
ttcctgaagaacgagagggacaacgccctcctgtcagccatcgaggagtctcgccgcagg
acgttcctggtggctgaggagtatcaccgcgagtccatgctggttcagtgggagcaggtg
aagcagagagttctccacacgctgctgggggctggggaagatgctctggatttcagtcaa
gatgtggagcccagcttcgtgagtgaggtgacaaccccaggaaggagtgcgctggacagt
gtggaggtggcgtacgctcggcagatctacattttcaacgagaagatagtgaacggacac
attcagcccaacctgggggatctgtgtgcgtccgtggcagacagcctcgatgacaagaac
gtctccgacatgtggctgatggtgaagcagatgactgacgtgctgctggttccagctaaa
gacaccctgaagagccgcacgtctgtggaaatgcaaatggcttttgttcgccaagcactc
aacttcctggagaacagctacaaaaactacaccatggtgaccgtcttcggaaacctccat
caggcccaactgggaggggtgcctggaacgtaccaactggtccgcagctttctgaacatc
aaactgccgggacccttacctggcatgcaggacggcgaggtggagggtcaccccgtgtgg
gcggtgatctactactgtctgcgctgcggcgatctgaacgcagccatgcaggtggtcaac
agagtgcagcatcagctgggagacttcaagagctggttccaggagtacatgaccagccca
gacaggcgcctttgccccacgtcagagaacaagctccgccttcactaccgccgcgtgctg
aggaacagcgccgacccctacaagagagccgtctactgcgtgatcgggaaatgcgacatc
aacgacaaccacggagaggtggcggacaagaccgaagattacctgtggctgaagctgaac
caggtgtgcttcgatgacgacggcagcagctctcctcaggaccgactcaccctgccgcag
ttacagaagcagctcctggaggattatggcgagtctcatttctcggcgagccagcagccc
ttcctgtacttccaggtcttgttcctgacggctcagttcgaggcggccgtggcgttcttg
ttccgcgtggagagactccgctgccacgccgtccacgtcgccttggttctctacgagctg
cggctgcttctcaagtcgtccggtcagagcgctcagctgctgagtcaggaacccggagac
ccgccgatgatccgtcacctcaacttcatccgtctgctgatgctctacactcgtaagttt
gagtccacggatccacgggaagctctgcagtacttctacttcttacgcaacgagaaggac
agccagggagaaaacatgttcatgcgctgcgtcagtgaactcgttatcgagagtcgagag
ttcgacatgctgctggggagattagagaaggatggcagtaggaagcccggcgtaatcgac
aagttcgccggagacacgcgagcgatcatcagcaaagtggcgttggaggcggagaacaaa
ggcctgttcgaggaggcggtccgactctacgagctggccaagaacccagataaggttctg
gagctgatgaacaggctgctgagtccggtcattgctcaggtcagcgcgcctcagtccaac
aaggagaggttgaagaacgccgccgtggccatcgcagagaggtaccgctctcaggggatc
gcaggggagaaggccgtcgacagcacgttctacctgctcttagacctgatgaccttcttt
gacgagtaccacgccggccacgtggaccgagcctacgacatcatggagcggctgaagctg
cttcctctcagccaggaaagcgtggaggagagagtggcggcgttcaggaacttcagcgac
gaggttcgacacaacctgtctgaagttctgctggccaccatgaacatcctcttcacacag
tacaagcgcctgaagggggcgccggcgggcacgccaggacgaccgcagaggagcttggag
gacagagacgtgcatctccgcgctcaggcccgagccctgatcaccttcgccggcatgatc
ccctacaacatggcgggcgacaccaacgccaggctggtgcagatggagctgctgatgaac
tga
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