Oryzias melastigma (Indian medaka): 112152631
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Entry
112152631 CDS
T07439
Symbol
usb1
Name
(RefSeq) U6 snRNA phosphodiesterase isoform X1
KO
K23093
U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112152631 (usb1)
Spliceosome [BR:
oml03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
112152631 (usb1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HVSL
Cut8
Motif
Other DBs
NCBI-GeneID:
112152631
NCBI-ProteinID:
XP_024138087
Ensembl:
ENSOMEG00000012930
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Position
LG6:25689968..25694748
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AA seq
276 aa
AA seq
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MLVGYSSSSEEEEEDSEAAAATQSQSCSPKKKEKDGFPMPKKAKMEEYVSKTRLPLPDCL
QTMFPDEEEPQTEDSSLHGGRIRSFKHERGNWATYVYFPYHPEEEFEELLEELLSAAASH
GVVLTPQEEFHLSLSQTVVLRHHWIQPFMQSLRAGLTHCKRFVCSAGRLRVYCNAERTRT
FLGMEAFTGHAQLLDLVRVIDQTLTEFQLETFYKDPSFHVSLAWCVGDLTEELKEITKEL
QSLVDERDDGPFHLNLDCAELRCRTGNKTFRFSLEA
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgttagtgggctacagcagcagctcggaggaggaggaagaggacagtgaagcggctgcg
gctactcaaagccaaagttgttctcccaagaaaaaggaaaaagatggttttccaatgccg
aagaaagcgaagatggaagaatatgtctccaaaacaagactgccccttcctgactgtctg
cagaccatgtttccagatgaggaagagccacaaacagaggacagttcgctccatggcggt
cgcattcggtccttcaaacacgagcggggaaactgggccacatatgtttattttccatac
catcctgaggaagagtttgaggagctgctggaggaactgctgtcagccgcagcctctcac
ggtgtggttttgacgccacaggaggagtttcacctcagcctgtctcaaacggtggtgctc
agacaccactggatccagcctttcatgcagagcctgagggcaggcctgactcactgtaaa
agatttgtctgttcagctgggaggctgagggtctactgcaacgctgagagaacaaggacg
ttcctcggtatggaagcttttactgggcatgctcagttgttggatctggtccgagtcatc
gaccaaacactgacagagtttcagctggagactttctacaaggatccatctttccacgtg
agtctggcctggtgtgttggagacctgacggaagagctgaaggagatcaccaaagagctg
cagagtctggtagacgagcgtgacgacggaccgtttcatttaaatctggactgtgccgag
ctgcgctgcaggacgggaaacaaaaccttccgcttctctttggaagcatga
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