Oryzias melastigma (Indian medaka): 112152663
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Entry
112152663 CDS
T07439
Symbol
carmil2
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 2
KO
K20493
leucine-rich repeat-containing protein 16
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112152663 (carmil2)
Membrane trafficking [BR:
oml04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
112152663 (carmil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
112152663
NCBI-ProteinID:
XP_024138137
LinkDB
All DBs
Position
LG6:complement(1031675..1094321)
Genome browser
AA seq
1803 aa
AA seq
DB search
MEQQGTTPQALWIHRTNSVPPKLQDQISEMLKPYRVCQITPIVPTHCCQSGGRAASRFVV
LCRWRAFLVFNKQPLKVEHTFSFMDISSIYIPSHTQMDLEMDGQTLSFSVLHTDDLDAII
GHMTASLKRIFPDSSPGNLLKTIPTDLQERLHALTEMVEEQLNAQPSPCGGFSDTYAALC
DFNEMQFKEEIQWDLDNIYHIHNSKVFNLQDFSHLDSRDLALAVAALSFNQWFIKIHCKE
LKLSMDIQQQLTFLLSRSPSLQEISLEGCGLKSDFGVKMAAALQERMSCPLQSINLSGNP
IEDKGVLALSPQLHRLDEGLKHLSLSCVSMTAKGLGSLGTVLSSNKIFPASLTHLDLSKN
PGSLSTEDAMFLFSFLSSSNSLSHLDLSDTSCPLDTLFVSLSAGCCSRLQHLNLARNPFS
HRKVRDVTRSIQQFFSQSWELKYVGLSATKLPAQALRLLLQGLATNNRLLGLELDLSSCE
LRSAGAQVIQEHISEATAIKSLDISDNGFENHMVTLVLSVGRCPSLRQLSLGKNFAMKSR
ALSDLLHRIAQLIQDEECPLQSLSVCDSKLKSGVHILLSALGGHAALTELDISGNNIGDT
GAKMLGKALMTNTKLRTLLWDRNNVSARGFQDVAEALERNFSLQKMPLPLADITQSYRSN
PEGTKEALNKIQLCLDRNNQRQCGSIELQQAFSCQQSEKLIQEKSRQLEDSLHCLSLSGS
QEVQSDVLASYELLQNAREALKLLPSLCEEGWKSAPDGDSVKDILRDAAAALTDHSNRSI
QELARGLMGHAEGVCPRVVQRSSVCMSLSDCVSRASRQAHDMLWSTLVEGAGQSISSRLR
ELRHTLTVTLVESVVEQLLQDLTDALDKMNCLMKENSSNTSRFNIPELRLADAEFPTDDY
TPAFWRNSLLSKSLRPAASLKSLLDADWEQQSRGSRTERQRGGGSAEEDGGGRCTFPPQL
TATSLPLKPSSPSPSPFTSLSPSPPVERGRRWMEGEVVPADAAEGPSRVRGASFIPLPGL
PPLYSISTRAPLEEEEEEAAGFHRREVRGPLPGTGFPASPMEPLPSQGQTLRHYTATRPR
PRRTHTQPPSSRPQEAVSKEENESSEVMGRVDEGVEEFFTKRIIPDYALKGRWEDSNPAQ
PTPSESSSTLSASPPFSSSSDVIPTSTVIAVTCPPVISPDTSLTSPDAPPPVTSSPCPTP
VTTSTTPTQVPTKNIKKKFGDFFAFKRPRASRAAKASGGEGGAEGVKVKRTSIADLIRPL
REAKERDKDRDKDRGARSVEDANLCNDAVITEGIGAGSAGGAGGVTAPAETLPTTMPPRK
TTPSPVTITTSPDIPSAALPNLDEAGAAALSLPPPEQEVQAGQKLSGERRLRVAKKLREG
KSQSLILLTGSESEDKDSTASKKHASESGASFEQRLQVMLQRIGVTKTPPADTKMCQNKD
EELRKANSEGAILDKPNPAPTCTKPRTMSTSSADPRLPLRALDPIRPDQALHPKPALPER
PVGLPPPKPAVAVKPPFPTPPTSAGRLTPPPMAPPTRSPTDKVQLATPPRLSRQDESEAQ
NGSQESPASSTSPRKDLLCPVPAPRRGASAQDRFDKAQSQTDESLPKPGSHMKPPPQRRA
VSVHEDALAMTQELKSVLQRSPICFRGNKWDLPSFSEDEAQRPHTDGESKGAGDAAKLPP
PGKEQTLPPSAAQAQHELSALHKAPSGSGTSAGTTPSPGRPSSTAAQKDGSSPTSPPQIS
DRPLVSPPSKETAPSIPPPKPSKTPHLSPKHQENGSCTAPPPAGLRNSTQERHEHRTDPP
SSE
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcaggggaccacgcctcaggctctatggatccacaggacaaactctgttcct
ccaaagctgcaagatcagatctcagagatgctgaaaccttacagggtctgtcagattacc
cccatcgttccaacccactgctgccagtcaggggggagagctgccagcaggtttgtggtg
ttgtgtcgatggagggctttcctggttttcaacaagcagcctctgaaggtggagcacacc
ttcagctttatggatatttcctccatctacatccccagtcacacacagatggatctggag
atggacggccagactctgtccttcagtgttctccacactgatgatctggatgcaataatc
ggtcacatgactgcgtccctgaagaggatctttcccgattcctccccaggaaacctgctg
aagacgattcctacagacctccaggagagactccacgccctgacggagatggtggaggag
cagctgaatgcccagcccagcccctgtggagggttctcagatacttatgctgctctttgt
gacttcaatgaaatgcagttcaaggaggagatccagtgggatcttgacaacatctaccac
atacacaacagcaaagtctttaacctccaagacttcagtcatttggacagcagagacttg
gctttggcagtggcagctttgtccttcaaccagtggttcatcaagatccactgcaaagag
ctcaaactgtccatggacatccagcagcagctgacctttctgctgtccagatctccaagt
ctgcaggagatctcactggagggctgtggactaaaatcggactttggagtgaagatggca
gctgctcttcaagaacgcatgtcctgtcctctgcaatccatcaatctctctggaaacccc
attgaagacaaaggagtcctagctctcagtccgcagttacatcgtctggatgagggactc
aaacatctttccttgagctgtgtatcaatgactgctaaaggtctgggcagtcttggtacg
gtcttatcctccaataagatcttcccagcatctctgacccacctggatctgtcaaagaac
cccggcagtctctccaccgaggatgccatgttcctcttcagcttcttgtccagctcaaac
tcgctgtcccacctggacctcagtgacaccagctgccccctggacacgctcttcgtgtct
ctgtctgctggctgctgcagccgactgcaacatctgaacctggccagaaatcccttcagc
cacagaaaagtgcgggatgtgaccaggagcattcagcagttcttcagtcagagttgggag
ctcaaatacgtgggtctgtctgcaaccaagcttcctgctcaagccctcaggttgctgctg
cagggtctggccaccaacaatcgtctccttggcctggagttggacctcagcagctgtgag
ctgcgctcggcgggggctcaggtcatacaggagcacatctctgaggccaccgccatcaag
agtctggacatctctgacaatggttttgaaaaccacatggtgacgctggttctgtcggtg
ggtcgatgtccgtctctgcgtcagctctccttggggaagaacttcgccatgaagtccaga
gctctctctgatcttcttcatcgcattgcccagctcatccaggatgaagagtgtcctctg
cagtctctgtcggtgtgtgactccaagctgaagtcaggcgtgcacatccttctgagcgcc
ctgggcggccacgccgctctgaccgagctggacatcagtggaaacaacattggagacaca
ggagccaaaatgctgggcaaagccctgatgaccaacaccaagctgaggactttattgtgg
gatagaaacaacgtgagtgccaggggctttcaggatgtggcagaagctttggagaggaac
ttctccctgcagaagatgcctttgccattggctgacatcacgcagagttaccgcagcaac
ccagagggaacgaaggaggccctgaacaagattcagctgtgtttggacagaaacaaccag
agacagtgtggcagcatagagctgcagcaggccttcagctgtcagcagtctgaaaagctg
atccaggaaaagtctcggcagttggaggacagcctgcattgtctcagcctctcaggctca
caggaggtgcagtcggacgtcctggcatcatatgagctgctacaaaatgccagggaggct
ttgaagctgctcccctctctgtgtgaggagggctggaaaagcgcccccgatggagactct
gtgaaggacatcctcagagacgctgctgctgcactgactgatcacagcaacagaagcatt
caggagctggctcgaggcctgatgggacatgcagagggggtgtgtcctcgagtggtccag
cgttccagcgtgtgcatgtctctgtcagattgtgtgtccagggcaagcagacaggcgcac
gacatgctgtggagcactctggtggagggtgcggggcagagcatcagcagcagactcaga
gaactgagacacacgttgaccgtcaccctggttgaaagtgttgtggagcagctgctgcag
gatctgacagatgctcttgacaaaatgaattgcctcatgaaagaaaattccagcaacact
tcaagattcaacattccagagttgcgactggctgatgccgagttcccgacagacgactac
actccggcgttctggaggaacagcttactctccaagagcctgaggccagcggcgtcgctc
aaaagtctgctggatgccgactgggagcagcagagcagaggcagtagaacggagaggcag
cggggagggggctctgcagaggaggacggagggggaaggtgtaccttcccgccacagcta
acggcaacctcgctgccgctcaaaccctctagtccctccccttccccttttacttccttg
tccccctcccccccagtagagaggggaaggaggtggatggagggggaggtggtgccagcg
gatgctgcagaaggaccatcaagagtcagaggagcatcgttcatccctctccccggcctc
cctcctctttactccatctccactcgagctccgctggaggaggaggaggaggaggcagct
ggcttccacagaagagaggtccgcggccccctccccggcactggattccccgcttctccc
atggagcctctaccctcccagggacagacgctaaggcactacaccgccacccgaccacgg
ccacgacgcacgcacacacagcccccctcctccaggcctcaggaggcagtgtccaaggaa
gagaatgagtccagcgaagtgatgggcagagtggacgaaggagtggaagaattcttcacc
aagagaatcatccctgactatgcactaaaaggccgatgggaggattcaaaccctgcccaa
cccactccctccgagtcaagctccaccctctctgcctcccccccattttcctcctcgtct
gacgtcatccccacatctactgtcatcgctgtcacctgtccccctgtcatatctccagac
acatcccttacctctcccgacgctcctccccctgtaacctcttcaccttgccccacccct
gtcaccacctccaccacccccacccaggtacccacaaaaaatatcaagaaaaagtttggg
gatttcttcgccttcaagaggcctcgagccagccgggctgccaaggcgagcgggggagag
ggaggagcagagggggtgaaggtcaaaagaacctccattgcagatctcattcgacccctc
cgagaggccaaggagagggacaaggacagggacaaggacaggggggcaaggtcagtagag
gatgctaacctttgtaatgatgccgtcatcacagaaggaatcggcgccggcagtgcaggc
ggtgcggggggagtgacggcgcctgcagagactttgcccacgaccatgcctccaaggaag
accacgccctcccctgtcaccatcaccacaagccctgacatcccctccgctgcgctcccc
aacctggacgaagcgggagctgctgcgctgagcctccctccacctgagcaggaggtgcag
gcggggcagaagctgtccggagagaggaggctgagagtggccaagaaactgcgagagggc
aaaagccaaagcctcattctgctgacggggtcagagtcggaggacaaggacagcacggcc
agcaagaaacacgcgtctgagagtggggccagctttgagcagaggctccaggtgatgctg
cagagaattggggtgaccaaaacccccccagcagacaccaagatgtgtcagaacaaagac
gaggagctcagaaaggccaactctgagggtgctatcctggacaaaccaaaccccgccccc
acgtgcaccaagcccagaaccatgtccacgtcatcagctgaccccagactccccctgaga
gcgctggaccccatccggccagaccaggctctgcacccaaaacctgctctccctgagcgc
cctgtgggccttccccctcccaaacctgctgttgcagtgaagcctccatttcccaccccc
cccacgtctgcaggaagactgaccccgcccccaatggctccacctacaaggagtcctaca
gacaaggtccagctggcaacgccaccgaggctaagcaggcaggacgagtcggaagcacag
aatggaagccaggagagtccagcctcctctacatcccccaggaaagacctgctatgcccg
gttcctgctccacggaggggggccagcgcacaggatcgctttgacaaagcacaatcgcag
actgatgagagccttccgaaaccgggttcgcacatgaagccccccccacagcgcagagct
gtgtccgtgcatgaagatgctctggccatgacccaagagctgaagtctgttttacagagg
tcaccaatctgtttccgtggcaataagtgggatctgccctccttcagtgaagatgaagca
caaagaccccacactgatggagagagtaaaggagcaggtgatgcagctaagctcccccct
cctggaaaggaacaaaccctgcccccgtctgcagctcaggctcagcatgaactttcagcg
ctccataaggctccgagcggctctgggacctcagcaggaaccacgccgtcaccggggaga
ccgtcctcaaccgccgcccaaaaggatggctccagcccaacctccccccctcaaatctca
gacagacctctagtctccccaccatccaaagaaactgcccccagcatacccccacccaaa
ccttcaaaaacaccccatctaagccccaaacaccaggagaacggatcctgcacagctccc
ccccctgcgggtctgcgaaacagcacacaggagcggcacgagcacagaactgaccccccc
tcgtcggaatga
DBGET
integrated database retrieval system
