Oryzias melastigma (Indian medaka): 112152665
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Entry
112152665 CDS
T07439
Symbol
cspg4
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oml00535
]
112152665 (cspg4)
04091 Lectins [BR:
oml04091
]
112152665 (cspg4)
Proteoglycans [BR:
oml00535
]
Cell surface proteoglycans
Others
112152665 (cspg4)
Lectins [BR:
oml04091
]
C-Type lectins
Others
112152665 (cspg4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
112152665
NCBI-ProteinID:
XP_024138140
Ensembl:
ENSOMEG00000004788
LinkDB
All DBs
Position
LG6:10299268..10391179
Genome browser
AA seq
2274 aa
AA seq
DB search
MRLLIGAFLAVLLSLPGPCHGDSYFGDSFCKLQLFQDISTFDLSLQIKTSRRSGLLLLAA
GIEDYLFLELLNGKLQARMNMGADEIILTSPDGVQLNNLLDHKLSLILGDGRLTMTIDDT
FETFVDVNIDGVLLNIDQGVWLGGTGDLDATYLSNAIPPFRGCMTDIKFVSHQFDILGSV
FKECQDTKESCSSEFEENDGEATSFSTPDSFVSFPTWSELAGATRTLEFLMKTTIEDALL
VFHPGRESDFIAVGVVKGYLKGILDVGNGIVMLDNTEVQLDDDQWHRVKVEVSQNSFALV
VDSQSSSHSFDSTAKLDLVGNLYVGGIQGKMKDLFRESGSLSRFEDDLTSESFIGCLNEI
KVNQRDRNLQDALVTKDVHVKCEGDDYDYSSYYDPDMVTTSPPDHITYTTVSLNEEQCHP
TENVPEIFKNITKLLATAPLLVPDGGEAFLDITNLNPTFDLRAAGMQPSQIIFTLLTDPL
FGLVDINTNIQGTKKFTLQHVLDRKIKYMHDGNVLDTDQINLEVVPNSNNILPECLKAPH
KLGLPVKIQEERRREINIVENGRTRMSVTDFDLENYDDLEILVGSTEFGYFGNGKEPGKK
ISDFTSRDLRDGNIFFVHEGGSPFEIPVMMSDSYSVSLNFYYKFIPIQPRITVANENAPI
TLAYNRQASLGTQNMAILPYPQNGDILFKVTQPPKFGELKIRASDGWYKQVTRFYQSDLE
KDHIRYVGKNIDHLDKTEEDKILFEASLGQTSLSNQVLSVIITPQEETMPELELKVGEEK
HIGIKELDIFLSDTNSDPNSFRYIVVKPPRLGSLQLSGKELSERDNFTHKDLLDNNVSFR
APQIDETSLDHFVLIVLSEGRYSPLHRFTVNILARKDDITMTNEKLVVVRGGEQTLDKGY
LWLQSPTSSSFLYRVTKEPMYGRLIRDSLPGEARFEGAIRVFSNEDILNNRLIYKHDGSR
THSDEFHFSATGEGSHGVETVDGVVKISIQLKNEHSPVRIVDKVFKVVRRGQRLLTTDVI
QFKDEDMGFSDSGIVFAREGILSGNIVSASNPLQHIFRFTQADLRDKKILFLHHGADVDR
FEIQVSDGIHKTTALLEIQAGDPYLHVVNNTMVEVDNDATQTIDTTHLSADSNMDIRDYS
EIKFQITSPPNHGNVVVSGIEATEFTQEDLRKGVVSYTHYGESQRPSDSFNFTVQAKGLS
EKGTFRIKINQLSYSVPEVVANEVIINFGGEHTKIDSNLLKVQAGDFAPTELQYSVKQFP
RLGHVANLTTSSDGMVLTPISSFTQDDIDQGLIVYVSLTDQGVDTFMVDVESDYGMLRNV
KMNVEIVPHMIPVQAFNFSVKEGFSREINADVLNISHSFYSSKNIEFVVEASPQHGDIRY
QDGYQLNYFSWREIMSGDIFYVHDSSETTEDSFTVTASCPEIRRRSLPVTIAVTIIPVNS
QPPMLIRNAGLEIRAGDTAEITSSMLSAEDEDTPPEELVYNIEMLSHGRVALKEKPGMDI
RNFTQADINEERVIFIDEGEEKSRLSFTVTDGEHTSPLYQFEITVKPATSTPVTHEKLLM
FPGTRQQITISNLEPVSNGDGREARFSLVRSPRLGRLILANRKNQFEEINSFSQSQLEAG
AVYYEHQLPAEPFWLVKDELEFRVESEPPRDTHHILPIDISFYAVHSNITSQLWRNTGLE
VVQGQRKTIDKSILDASNLLTLIPESEERDVLYMIKRFPDHGRITLGGQDLSHNTQSFTQ
EDVSQGRVEYLHDDSRGPSDSFSFRARLKLERGGVPHRAENIILEEVFQISVKRRGSEPP
ELVTTDVLLEVPQGSRTVINQEYLNTQDEDSPPDEVRFKVTKAPTNGRFYNIRTMEPISE
FTQEMVNNNQVAFYSDNSLRNGFVEFVVTDGEHETERFTLHIGILAHTLYLHQAQEIRVK
QGDDETLVTEEMLKGTTNGPTEEAILYKITNVPKYAAIMVDRQPTSAFTQKLIREGRVSV
RFVKSTSPQDTVSFTARSRIANVSSVLNITVQPLANIAQDPLLPQGALIQLDKRLLDATP
LANKTRTTPTFTITQQPKGGRFLKPGGQPLESFSQKDLDEGRVTLEIDNPSEKGSGPNQD
EAHFLLKAHGVPPAECVLSFQTGPYNSSGLYPVTLLRVPGGFSHNTPRTPRLRGDMDWAW
TTASSASDSHVKPITRRSSIWSILIPILVVLLLLLLAAIVVYYLVHKNKTGKHNVQTASS
KPKNGEVAGTETFRKTDPANNISMSNMDSKDADPELLQHCRTSNPASKKNQYWV
NT seq
6825 nt
NT seq
+upstream
nt +downstream
nt
atgagactcctcatcggtgccttcctggccgtgctgctgtccctccccggcccctgtcat
ggagattcctacttcggagacagcttttgcaaactgcaactctttcaagacatctccacg
ttcgatctgtccctacaaatcaagacgagtcgcaggagcggtcttctcctcctggctgca
ggaatagaggactacctcttcctcgaacttcttaatgggaaattacaggctcgaatgaac
atgggggccgatgagatcatactgacttcccctgatggagtacagctcaacaacctcctg
gaccacaagctgtcactgattttgggagatggcagacttaccatgacgatcgatgatacc
tttgaaacatttgtcgacgttaacattgatggagtactgctgaacattgaccagggtgtg
tggctcggaggaaccggagatttggacgccacctaccttagcaatgccatccccccattc
cgtggctgtatgactgacataaagtttgtttcacaccagtttgacatcctcggctctgtg
tttaaagagtgccaagacacaaaggaatcctgtagcagtgagtttgaagagaacgatggg
gaagcaacaagtttcagcactcctgattcctttgtgtccttccctacatggagtgagctc
gctggggctacaaggaccttggagtttctaatgaaaaccacaatagaggatgctttgctt
gtttttcaccctggcagagaatcagacttcatcgctgttggtgtggtgaaaggttatctc
aaaggaatactggatgttgggaatggtattgtgatgcttgacaataccgaagtgcagctt
gatgacgatcagtggcacagagttaaggttgaagtcagccagaactcatttgctctcgtt
gtcgacagccaatcgtcgtcccattcttttgactcaacagctaaactggatttggttgga
aacctgtacgtaggaggcatacagggaaaaatgaaagacctcttccgagagagcggttct
ttgagtcgtttcgaggatgacttgacatccgagtccttcattggatgcttgaacgaaatc
aaagtcaaccaaagagatcgaaacttacaagatgctttggtgaccaaagacgttcatgtt
aaatgtgaaggagatgactatgattactcgagttactacgacccagatatggtaacaaca
tctccacctgaccacattacatacaccactgttagtttgaatgaagaacaatgccatcca
acagagaatgtccctgagatattcaaaaacataacgaaacttcttgctaccgcccctctg
ctggtaccggatggaggagaggcgtttcttgatatcacaaacttaaatcctacatttgac
ctcagggcagcgggaatgcaaccatctcaaatcatcttcactctcctgactgatcccctt
tttggcctggtggatataaacacaaacatccaggggaccaaaaaattcactcttcaacat
gttctcgataggaagattaaatatatgcatgatggaaatgtactagacacagatcagatc
aatttagaagtagtgcctaatagcaacaacatcctcccagaatgcttaaaagctcctcac
aaacttggacttccagtgaaaattcaagaggaaagaagaagagaaattaacattgtagaa
aatggccgcactcgcatgtcagtcacggattttgatttggagaattatgatgacttagaa
atacttgtaggttcaacagaatttggttactttggaaatggcaaagaaccaggaaaaaag
atttcagatttcacctccagagacttgagagatggaaacatcttttttgtacatgaaggg
gggagcccttttgaaatacctgttatgatgtcagatagctattcagtaagcctgaatttt
tattataagttcattccaattcaaccacgaatcactgttgccaatgagaatgctcctatt
acactggcctacaaccgtcaagcatcacttggaactcagaatatggctattttgccttat
cctcaaaatggagacattttgtttaaagtaacgcaaccccccaaatttggggaactaaaa
attcgggcaagtgacggatggtacaaacaagtgacccgtttttatcagtccgatctggag
aaagaccacatcagatatgttggaaaaaatattgatcatttagacaaaactgaagaggat
aaaatcctttttgaggccagccttggccagacttctctttcaaaccaagttttgtctgtc
ataattacaccacaagaagagactatgccagaactggagcttaaagttggggaagaaaaa
cacattggtatcaaagaacttgacattttcttgagtgacacaaattcagatccaaattcc
tttagatatattgtagtcaaacctccaagacttggtagtctacaactgtctggtaaagaa
ttgagtgaaagagacaactttactcacaaggatctcttagataataatgttagttttaga
gcaccacaaatagatgaaactagtttagatcattttgtgttaatagtactttctgaaggt
cggtactctcctctgcataggttcaccgtaaatatccttgccagaaaagatgatattaca
atgaccaatgaaaagctggttgttgtgcgaggtggtgagcagactctggacaaaggttac
ctttggctgcagtctcctacttctagctcttttttataccgggtcacaaaggaaccaatg
tatgggcgactcattagggattctcttccaggagaggcacgatttgaaggggccattcga
gtctttagcaatgaagacattctaaataacaggttgatatacaagcatgatggctcaagg
acacattctgatgaattccacttttcagcaactggtgaaggttcacatggtgtggaaacg
gtggatggtgttgtcaaaatatctatccagttaaagaatgaacattctcctgtgaggatt
gtggacaaagtcttcaaagtggtccgccgtggtcagcgcttgctaacgacagatgtcatt
cagttcaaagatgaggacatgggctttagtgacagtgggattgtctttgctcgggaagga
attctctcaggcaacattgtctctgcatcaaatccactacagcacattttccgtttcact
caagctgaccttagagacaagaaaatcttgtttcttcaccatggagcagacgtggaccgc
tttgaaatacaggtgtcggatggtatccacaagacaactgccctgcttgagattcaggct
ggtgacccttacttgcacgttgtgaacaacacaatggtggaagttgacaatgacgccacc
cagaccattgacaccacccatctgagtgctgactccaacatggacatcagagactacagt
gagattaaattccagattacatctccacccaaccacggcaatgtggttgtgagtggcatt
gaggccacagagtttactcaagaggatttaaggaaaggagttgtgtcatacacgcactac
ggagagagccagagacccagcgactcctttaatttcactgttcaagccaaagggttgtct
gaaaaaggaacattcaggattaagattaaccagctttcctattccgtgcctgaggtagta
gccaatgaggtcatcatcaactttggaggagaacataccaaaatcgacagtaacctatta
aaggtgcaggccggtgattttgctcccacagaattgcagtattcagtcaaacagtttcca
aggcttggtcatgtggccaacctaacgaccagttcagacggtatggtcctcacccctatc
agctccttcacgcaggacgacatcgatcagggcctcattgtctatgtgtcccttaccgat
cagggcgtggacactttcatggtggatgttgagagcgattatggcatgctgagaaacgtg
aagatgaatgtggagattgtccctcacatgattcctgtccaggccttcaacttttctgtc
aaagagggtttcagcagggaaatcaacgcagatgtcttaaacatttcacattcgttctac
agctcgaaaaacattgagtttgtggtggaagcgtctccccaacatggtgacatccgttac
caagacggatatcaactgaactatttctcttggagagagataatgtctggagatatattc
tacgtccatgacagcagcgagaccacagaagacagttttactgtcaccgcttcctgtcct
gagattcgtcgcaggagcctccccgtcaccatcgcagtcactatcattcccgtcaacagc
cagccgcccatgctgatacgcaacgctggcctggagattcgagccggtgacacagcggaa
atcacgtccagcatgttgagcgctgaggacgaagacacgccccctgaggagctggtctac
aacattgaaatgctgagccacgggagggtggccctgaaggagaagcctgggatggacatc
aggaatttcacacaggctgacattaatgaagagagggtcatcttcattgatgagggtgaa
gagaagagcaggttaagtttcaccgtgacagacggcgagcacacatcccccctctaccaa
tttgagatcacggtgaagccagccaccagcaccccggtgacacatgaaaagctcctcatg
tttccaggaacgaggcagcagatcaccatctccaacctggagcctgtgagcaacggggac
ggcagggaggcgcgattctctctcgtccgttcacctcggttgggaagacttatcttggca
aacagaaagaaccagtttgaggaaattaacagtttttcccagtcacagttggaggcaggg
gcggtctactacgagcaccagctccctgctgagcccttctggttggttaaggacgagctg
gagttcagggtggaatcagaaccgccacgcgacacccaccatatcctacccattgatatc
tccttttacgccgttcacagcaacatcacctcccagctgtggaggaacacaggtcttgag
gtcgtgcaaggtcaaaggaaaaccattgacaagtcaatccttgacgcttccaaccttctg
acacttattcctgaatcagaagaacgggacgtgctttatatgattaaacgtttccctgat
catggtcgtattacccttggtggtcaggacctttctcacaacacccagtccttcacccaa
gaagatgtttcacaagggcgggtagagtatctccacgatgactccaggggcccgtctgat
agtttctctttccgtgcccgtctaaagcttgaaaggggaggggtaccccaccgtgctgag
aacattatactagaggaagtctttcagatatccgtcaaacgacgagggtctgagccccct
gagcttgtcacaacagatgttctcctggaagttcctcagggatccaggacagttatcaat
caggagtatctcaacacacaggacgaagacagtccgcctgatgaagtacgcttcaaggtg
accaaagcaccgaccaatggtcggttttataacatacgtactatggagccgatctctgag
ttcacacaagaaatggtcaacaataaccaggtggctttctacagcgacaacagtctgaga
aatggttttgtggaatttgttgtcacggatggggaacacgagacagagaggttcacttta
cacattggcatcctggctcacactctttatctccaccaagcccaagagatcagagtgaag
cagggtgacgatgagactttggtgacagaggagatgttgaagggtaccacaaacggtccc
actgaggaggcaatcctttacaagatcacaaatgttccaaagtatgctgccattatggtt
gaccgccaacctacatctgcattcacccagaaactgatcagagaaggcagagtcagtgtc
cgctttgtcaagtccacttcccctcaagacacggtttccttcacagcccgcagccggatt
gcaaacgtttcctcggtcctcaacatcactgttcaacctttggctaacattgcccaggat
cctctgttaccccagggggcactcatccaactagacaaacggcttcttgatgcaactcct
ctggccaacaagacaaggacaactcccacattcactatcacccagcagccgaaagggggt
cgattcctgaaacctggggggcaacctctggagtcattcagccagaaggaccttgatgag
ggtcgtgtaactctagaaatagataacccttcagaaaaaggaagtggtcctaaccaggat
gaagcccacttcctcctcaaagcacatggagtccctcctgcggaatgtgtgctttccttc
cagacaggcccctacaactcctctgggctttaccctgtcactttgttgagagtccctggt
ggtttttctcataacaccccccgaaccccgcgtctgagaggtgacatggactgggcctgg
accacagcatcatctgcctctgactctcacgtgaaacctataactcgtcgcagcagcatc
tggtccattctcatccccattctggtagtgctcctcctcttgttgttagccgccattgta
gtgtactatttggtccacaaaaacaagacaggcaagcacaatgtccagacggcatcctca
aagcccaaaaacggagaggtggccggcacagaaaccttccgcaaaactgatccagctaat
aacatctccatgtccaacatggactctaaagatgcagaccctgagttgttgcagcactgt
cggacatcaaacccggcctcaaaaaagaaccagtactgggtttga
DBGET
integrated database retrieval system
