Oryzias melastigma (Indian medaka): 112152706
Help
Entry
112152706 CDS
T07439
Symbol
taf3
Name
(RefSeq) transcription initiation factor TFIID subunit 3
KO
K14650
transcription initiation factor TFIID subunit 3
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112152706 (taf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oml03021
]
112152706 (taf3)
Transcription machinery [BR:
oml03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
112152706 (taf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromo_TP
PHD
PHD_2
Cellulose_synt
Motif
Other DBs
NCBI-GeneID:
112152706
NCBI-ProteinID:
XP_024138225
Ensembl:
ENSOMEG00000011560
UniProt:
A0A3B3BXK9
LinkDB
All DBs
Position
LG6:14680378..14691843
Genome browser
AA seq
936 aa
AA seq
DB search
MCESYARSLLRVSVAQICQALGWDAVQVTACDLLSDVLHRYIQQLARVCHRYSELYGRTD
PVLDDLSQAFRLMGVNLSELEDYVHNLEPVAFAHQTPLFPVCKNNMLQFPPSAARDADER
KDYIPDYLPPLVSLQEEEEEEEVLPDMGTSAEAMQVALEEDEEEIDEEETVNDENYPLKR
HLDSPDAALGIMPTSKKPRMYPGLSPEWGVEPREPLMSLNPQRVPPGVLPSHDSLDPLSP
EMPSGTLQPFRPQPIIPKQYDQKSLATPGKKPKISSPGRQRTKSPKGIIPVPLAGSPIHS
PKPSKEKKKSPARTKSPKSPKSPKMSSIKASLLQSKAELLHKPPLPALNEKIGKENIQMR
HVIEDREPPEGLFKNLEPDNTAIDDSIAAVIARACAEREPDPFAFSSGSDSDSNGFSSPK
RLTIMEPATPKAPAGMANLLKDTSTPLHLQMHPGLGNWTLDDSINEVVRKANQGGPSAAP
QSQAEYVSSGSASPPTPEPLLKVFEEKNKIVPPPDLKKKLKKELKTKMKKKEKEKPKDKD
REKDKGKLKERSKEKNKDKNKEFSKDMKIPWKEFGMSNEDHFGQLDFSLSDIPIKIKSKD
GEVPKKEKDKHKDKKKDKEKSKKDKDKRDKGKDRNKEDKQKQPTLPPFVLSEVPPLFSPS
TCLRMPPMLPPLPPILQEKEVKSKEKEKKKEKKEKKKKKDKEKDKEREKAKEREREKEEK
RKEKEREKDKRDKEKEKEKIRLEKVKADAPVVLPSPVIPRLTLRVGAGQDKIVISKVVPS
SETRTPTPKAPAAKSIPVNRPRTPPPVPILPPVVPILPPVAPPPPIIAPPASSLLSVPSM
LPLSASVKTPVRSVVTETVSTYVIRDEWGNQIWICPGCNKPDDGSPMIGCDDCDDWYHWP
CVGIVAEPPEDQPWFCVKCSSKKKDKKHKKKKHKPH
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgagagctatgcccgctcgctgctgcgtgtttcggtggcgcagatctgccaagct
ctgggctgggatgcagtccaggtcactgcgtgcgatctactgtctgatgtgctgcacaga
tacatccagcagctggcgagggtctgccaccgatactctgaactgtatggaagaacagat
ccggtgctggatgacctcagccaggccttccgactcatgggggtgaacctgagcgagctg
gaggactacgtccacaatctggagcccgtggcctttgcccatcagacgccgctctttcct
gtatgcaaaaacaatatgctgcagtttcctccgtctgcagccagagacgcagatgaaagg
aaggactacattccagattacttgccacccctggtttcccttcaagaagaagaggaggag
gaggaagtccttccggacatgggcacctcggctgaagcaatgcaggtggcactggaggag
gacgaagaggaaatagatgaagaagagacggtcaacgatgagaattaccctctgaagcgg
catttggacagtcccgatgcagctttgggcatcatgcccacctccaagaaaccgcgcatg
taccccggtctcagcccagaatggggggtcgagccccgggagcctctcatgtcgctcaac
ccgcaacgcgtccctccaggcgttctgccttcgcatgacagcctcgaccccctgtcacct
gaaatgccatctggtaccctgcagcccttcagacctcagccgataataccaaaacaatat
gatcaaaagagcctcgccacaccggggaagaagcccaagatttcgtccccgggcaggcaa
cggactaagtcccccaaagggatcattccagttccgttagctggtagtcccatccactct
cccaaaccgtcaaaggaaaagaagaagtctcctgctcggacaaaaagtcctaagagtcct
aaaagcccaaagatgagttccatcaaagcatctctgcttcagagcaaagcagagctcctg
cataagccaccgctccccgcgctgaacgaaaaaataggcaaagaaaacattcaaatgcgt
cacgtcattgaggacagagagccaccagaggggctctttaagaacctcgagcccgacaac
acggccattgatgactctatagctgctgtcatagccagagcgtgtgctgagcgggagccc
gaccccttcgccttctcctcgggttccgattccgacagcaacggattctcaagccccaag
aggctgaccatcatggagcccgccacccctaaagcccccgccggaatggccaacctgcta
aaggatacgtcaacgccgctccacctacagatgcatccgggcctcggaaactggaccttg
gacgattcgatcaacgaggtggtccggaaggccaatcaaggcggtccgtctgcagcgcct
cagagtcaggcagagtacgtgtcctctggatcggcctcgccgcccacccctgagcctctt
ctcaaagtgtttgaggagaagaacaagatcgtaccaccaccggatctgaagaagaagctg
aagaaggagcttaaaaccaagatgaagaagaaggagaaggagaagccaaaagacaaggac
cgggagaaggacaagggaaagctgaaggagaggagtaaggagaaaaacaaggacaaaaac
aaggaattttccaaggacatgaagataccctggaaggagttcggaatgagcaacgaagac
cactttggacagctggacttcagtctgtcggacatccccatcaaaatcaaatcaaaagat
ggagaagtccccaagaaagagaaggacaagcataaagacaaaaagaaggacaaagagaaa
agcaaaaaggacaaggataagagggataagggcaaagacaggaacaaggaggacaagcag
aagcagcccacccttccgccttttgtcctcagcgaagtgcctcctctgttcagcccctct
acctgcctgcgaatgcctcccatgttgcctccactgcccccaatccttcaggagaaagag
gtgaagagcaaggagaaggagaagaagaaggaaaagaaggagaaaaagaaaaagaaagac
aaggagaaggacaaggagcgggagaaagccaaagaaagggagagggagaaggaggagaag
aggaaagagaaggagagggaaaaggacaagagggataaggagaaagaaaaggagaagatt
cgattagagaaggtgaaagcggacgctccggtggtcttaccctctccagtcatccccaga
ctgaccctcagagtgggagcaggtcaagacaaaatagtcatcagtaaagtggttcccagc
tcggagacccggacaccgaccccaaaggctcccgccgccaaatccatacccgtgaatcgt
cctcgaacaccccctccagtccccatcctgccccccgttgttccaattctgcctccagtg
gcccccccacctccaatcatcgctcctccagcttcgtctctgctttctgtgccgtctatg
cttcctctctctgcttctgtcaagactccagtgcgcagcgtggtcacggagaccgtcagt
acttacgtgattcgggatgaatggggaaaccagatctggatttgtccgggatgcaacaaa
cctgacgatgggagtcccatgatagggtgtgacgactgtgacgactggtatcattggcct
tgtgttgggatcgtggcggagcctcccgaggaccagccgtggttctgtgtgaaatgttcc
agcaagaagaaagacaagaaacataagaaaaagaaacacaaaccacactga
DBGET
integrated database retrieval system
