Oryzias melastigma (Indian medaka): 112152812
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Entry
112152812 CDS
T07439
Symbol
sntb2
Name
(RefSeq) beta-2-syntrophin
KO
K24064
beta-syntrophin
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112152812 (sntb2)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_Tricorn
PDZ_6
Motif
Other DBs
NCBI-GeneID:
112152812
NCBI-ProteinID:
XP_036068422
Ensembl:
ENSOMEG00000019639
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Position
LG6:29966367..29997986
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AA seq
591 aa
AA seq
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MAVWTRADKNGQLDLLLRDRWIRVTAELTRETLTLTAEAEFAGPGANHWDYPPAGLRNGM
SNGNEPGSNLGSPGRGSSAGQDHVQNHRVRGRSSSPARAGVARGQSEGNYGVNSPGKYPN
NGTNSDFGSPGSSYGSPGSSFGSRHGDFPAGVDGSSEAVRKVRVVKQESGGLGISIKGGR
ENRMPILISKIFPGLAADQSRALRVGDAIMSVNGNDLREATHDMAVQALKKAGKEVTLEV
KYIREVSPLFKKPSLVADLPWDGVRPQSPSYSGSEDSGSPKHSSSSSTSKDRKVISLKMC
FISRNLSMPDLENRLLELHSPDGQHTVVLRCKDGPSASSWFTAVHTNIAALLPHTLAHIN
AYLGASSSAPTHPHLKHIGWLAEQVQLDGGRQQYRPVVMALTEKDILLFEAVPWSRESWS
MPLLTHPLLATRLVHSGSSGGSPSQASDMVFATRTGTSRGIESHVFRVETHWDLSSWTRA
LVQGVHSAAEIIQEVSIGCTLNRQDVRLTLHFEKGFTVTREPADPPGGTVLYRYPYEKLR
MSADDGVRNLYLDFGGPEGEMVFDLHSGPKPVVFVLHSFLSAKLTRMGLLT
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgtggaccagagcggacaaaaacggccagctggacctcctgctccgggaccgc
tggatccgcgtgaccgccgagctcacccgggaaacgctgactttaacagccgaggcggag
ttcgccggaccgggggccaaccactgggactaccccccggccggcctgcgaaatggcatg
tcgaacggaaacgagccgggctcgaacctggggagccccggccgcggctcctccgcgggc
caggaccacgtgcagaaccaccgggttcgagggcgcagcagcagcccggctcgggcgggc
gtcgcccgcggccagagcgagggaaactacggcgtgaacagccccggaaagtacccgaat
aacgggaccaactccgacttcggcagccccggctccagttacgggagtcccgggtcgagc
ttcgggtccagacacggagacttcccggccggcgtggacggctcgtcggaggcggtgcgg
aaagtccgggttgtcaagcaggagtccggcgggctggggatcagtatcaagggcgggcgc
gagaaccggatgcccatcctcatctccaagatcttcccggggctggccgcggaccagagc
cgcgcgctccgcgtgggagacgcgatcatgtcggtgaacgggaacgacctccgggaggcg
acgcacgacatggcggtccaggctctgaagaaggccgggaaagaagtcacgctggaggtg
aagtacatccgggaggtgtcgccgctcttcaagaagccgtcgctggtcgccgacctgccg
tgggacggcgtccgcccgcagtcgcccagctacagcggcagcgaggactcgggttctccc
aaacacagcagctcctcctccacgtccaaagaccggaaggtcatcagcctgaagatgtgc
ttcatcagccggaacctctccatgccagatctggaaaacagactgctggagctccactct
ccggacggccagcacaccgtggtcctgcgctgtaaggacggcccctccgccagctcctgg
ttcaccgccgttcacaccaacatcgccgcgctgcttccacacactctggcgcacatcaac
gcgtacctgggggcgtcgtcctccgcccccacacacccccacctcaagcacatcggctgg
ctggctgagcaggtccagctggacggcggcaggcagcagtaccgacccgtggtcatggcg
ctgacggagaaggacatcctgctgttcgaggccgtgccgtggagcagagagtcctggtcc
atgcctctgctcacacaccctctgctcgccaccagactggtccactccggcagctccggg
ggttccccctcccaggcctcagacatggtgtttgccactcggaccggaaccagccgcggc
atcgagtcgcacgtcttccgcgtggagacgcactgggacctgtcctcctggacgcgggct
ctggtgcagggggtccacagcgccgccgagatcatccaggaggtgtccatcggctgcacg
ctgaacaggcaggacgtccggctgacgctgcacttcgagaagggcttcaccgtgacccgg
gagccagccgaccccccggggggcaccgtgctgtacagatacccctacgagaagctcagg
atgtcggccgacgacggagtccggaacctttatctggactttggaggtccggagggagaa
atggtgttcgacctgcactcggggcccaagccggtggtgttcgtcctccactccttcctg
tcggccaagctgacccgcatgggcctcctgacgtga
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