Oryzias melastigma (Indian medaka): 112152818
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Entry
112152818 CDS
T07439
Symbol
rbm28
Name
(RefSeq) RNA-binding protein 28
KO
K14573
nucleolar protein 4
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112152818 (rbm28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oml03009
]
112152818 (rbm28)
Ribosome biogenesis [BR:
oml03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
112152818 (rbm28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
112152818
NCBI-ProteinID:
XP_024138381
Ensembl:
ENSOMEG00000007801
LinkDB
All DBs
Position
LG6:complement(21725956..21733053)
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AA seq
757 aa
AA seq
DB search
MSTHTIFVGSLPDSATNERLEEIFSEIGPVKQCFVVREKGTDKCRGFGFVKYSMEEDAQR
ALQEIKDYDGKKLSLSMAKKKINDKKKAVKETDKAPNPGPKKAPGIKKQQLKSRLIIRNL
SFKCSEDDLKEVFEKYGTVLEAKIPLKPDGKMRGFAFVLFKNVCGAAKALKAMNLKEIKG
RPVAVDWAVPKDKYTASAQSSQSGNKKTIEAKDTDDEDEEKNKVVQPVEEPKSKDEDESE
EEDEDEDGSEDEDGGEDDENNEDDQEEEEDDDKEEDDDDDDDNSLDSDSVQDDSEDEEDE
DDQSAKRKAKKKQLPSDVKEGRTVFIRNLSFDTEEEGLEEVLLQYGELNYIKIVLHPDTE
HSKGCAFAQFKTKEAADKCIAAAQDEAEKGGIRVDGRKLSVVAAVSREDAVKLKDDKKKV
ETGSRNLYLAREGLIRSGTKAAEGVSEADMAKRTRFEEMKRAKLRDISVFVSKTRLCIHN
LPKSVDNKKLRALCLQAVKGVKGVRIVECRVMYDRKPEKGQVVGQSLGYGFVQFQEHEHA
LSTLRYLNNNPDIFSAHKRPIVEFSLEDSRKLKIKEIRKQKHKDFLKSHAFKGGKPQQKY
PGEVNRTQRSGDEEQSTSKKKGKDKWNFEKQNQRGLYSGFKTKAEVEHVDLQNGKKRRKV
LPLPSHRGPKIRMRDKGKQQAPPPKKAKPGSKRNNQRRLQIEKPSQLRNQKVQNQNNKRF
KRKDGDRFENLVEQYKKKLLGSGNKGAIVKRNKWFDS
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgcataccatcttcgttgggtctttaccagattcagctacaaacgaacggctt
gaagaaatcttctcagaaatcggtccggtcaaacaatgcttcgtggtccgagaaaaaggg
acagacaaatgtcggggatttggttttgtcaagtattcaatggaagaagatgcacaacga
gccctgcaagaaatcaaagactacgatgggaagaagctctctctttctatggcaaagaag
aagattaatgacaaaaagaaagcagttaaagagacagataaagcaccaaatcctggtcca
aagaaagctccgggcattaaaaaacaacagctgaaatcccgactcattatcaggaatctc
agctttaagtgttcggaggatgatctaaaagaggtttttgaaaaatatggaacagttttg
gaggccaagattcccttgaaacctgatggaaaaatgcgagggtttgcatttgtgctgttt
aaaaatgtgtgtggagcagcaaaagcactaaaggcgatgaacctaaaggagataaaaggt
cgacctgttgcagttgactgggctgttcccaaggacaagtatactgcctcagcacagtca
tcacagtcaggcaacaagaaaacaatagaagcaaaagacactgatgacgaggatgaagaa
aagaacaaagtggtgcagccggtggaagagcccaagtcaaaggatgaagatgaaagtgag
gaggaagatgaggatgaagatggcagtgaggatgaagacggcggtgaggatgatgaaaac
aatgaagatgaccaagaagaagaggaagacgacgacaaggaggaggatgatgatgatgat
gatgataatagccttgattcagacagtgtacaagatgacagtgaggatgaggaggatgaa
gatgatcaatcagctaaaaggaaagctaagaaaaaacaacttccttctgatgtgaaagaa
ggccgaacagtttttataaggaacttgtcttttgacacggaagaagaaggactcgaggaa
gttctccttcagtacggagagcttaattacataaagatcgtcctccatccagacacggaa
cattcaaaaggttgtgcgtttgctcagtttaagaccaaagaagctgcagacaaatgtatt
gctgcagctcaggatgaagcagagaaggggggcatccgtgtggacggcagaaagctgtcg
gttgttgcagcagtgagcagagaagatgctgtcaagctaaaagatgataagaagaaagta
gaaacgggcagcaggaatctgtaccttgccagagaaggattgattcgctctgggaccaag
gctgcagaaggggtttctgaggcagacatggccaaaagaacaagatttgaggaaatgaaa
agagccaagcttcgggacatcagcgtgttcgtctccaaaactcgcctgtgcatccacaac
ctgcctaagtcagtggacaacaagaagctccgggcactctgccttcaagctgtgaaagga
gtcaaaggagttcggatcgtagagtgtcgagtcatgtatgacaggaagccagagaagggt
caggtggtcggacagtctctgggttatggtttcgttcagttccaggagcatgaacacgct
cttagcactctgcgttacctgaataataacccagacatcttcagcgcccacaagagacca
attgtggagttctctctggaagattcaaggaagctcaaaataaaagaaataagaaagcaa
aagcacaaggatttcctgaaaagtcatgctttcaagggagggaagcctcaacagaaatat
cctggagaagttaacagaactcagagaagtggagatgaagaacagtcaacgtctaaaaag
aaaggaaaagataaatggaatttcgaaaagcagaaccaacgcggattatattcgggcttc
aagaccaaagccgaggtcgagcatgtcgatttgcagaatggaaaaaagcgaaggaaggtt
ctacctttgccttctcaccgaggacctaagatcaggatgcgggacaaaggaaagcaacaa
gccccgccccccaagaaagcgaagccaggatccaaaagaaacaatcaaaggagattgcag
atcgaaaagccgtcacagcttagaaatcagaaggtccaaaatcaaaataataagcggttc
aagagaaaagatggcgaccgctttgagaacctggtggagcaatacaagaagaaactgttg
ggcagcgggaacaaaggagcaatcgtcaaaagaaacaagtggtttgatagttag
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