KEGG   Oryzias melastigma (Indian medaka): 112152818
Entry
112152818         CDS       T07439                                 
Symbol
rbm28
Name
(RefSeq) RNA-binding protein 28
  KO
K14573  nucleolar protein 4
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    112152818 (rbm28)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:oml03009]
    112152818 (rbm28)
Ribosome biogenesis [BR:oml03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    112152818 (rbm28)
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 112152818
NCBI-ProteinID: XP_024138381
Ensembl: ENSOMEG00000007801
LinkDB
Position
LG6:complement(21725956..21733053)
AA seq 757 aa
MSTHTIFVGSLPDSATNERLEEIFSEIGPVKQCFVVREKGTDKCRGFGFVKYSMEEDAQR
ALQEIKDYDGKKLSLSMAKKKINDKKKAVKETDKAPNPGPKKAPGIKKQQLKSRLIIRNL
SFKCSEDDLKEVFEKYGTVLEAKIPLKPDGKMRGFAFVLFKNVCGAAKALKAMNLKEIKG
RPVAVDWAVPKDKYTASAQSSQSGNKKTIEAKDTDDEDEEKNKVVQPVEEPKSKDEDESE
EEDEDEDGSEDEDGGEDDENNEDDQEEEEDDDKEEDDDDDDDNSLDSDSVQDDSEDEEDE
DDQSAKRKAKKKQLPSDVKEGRTVFIRNLSFDTEEEGLEEVLLQYGELNYIKIVLHPDTE
HSKGCAFAQFKTKEAADKCIAAAQDEAEKGGIRVDGRKLSVVAAVSREDAVKLKDDKKKV
ETGSRNLYLAREGLIRSGTKAAEGVSEADMAKRTRFEEMKRAKLRDISVFVSKTRLCIHN
LPKSVDNKKLRALCLQAVKGVKGVRIVECRVMYDRKPEKGQVVGQSLGYGFVQFQEHEHA
LSTLRYLNNNPDIFSAHKRPIVEFSLEDSRKLKIKEIRKQKHKDFLKSHAFKGGKPQQKY
PGEVNRTQRSGDEEQSTSKKKGKDKWNFEKQNQRGLYSGFKTKAEVEHVDLQNGKKRRKV
LPLPSHRGPKIRMRDKGKQQAPPPKKAKPGSKRNNQRRLQIEKPSQLRNQKVQNQNNKRF
KRKDGDRFENLVEQYKKKLLGSGNKGAIVKRNKWFDS
NT seq 2274 nt   +upstreamnt  +downstreamnt
atgtctacgcataccatcttcgttgggtctttaccagattcagctacaaacgaacggctt
gaagaaatcttctcagaaatcggtccggtcaaacaatgcttcgtggtccgagaaaaaggg
acagacaaatgtcggggatttggttttgtcaagtattcaatggaagaagatgcacaacga
gccctgcaagaaatcaaagactacgatgggaagaagctctctctttctatggcaaagaag
aagattaatgacaaaaagaaagcagttaaagagacagataaagcaccaaatcctggtcca
aagaaagctccgggcattaaaaaacaacagctgaaatcccgactcattatcaggaatctc
agctttaagtgttcggaggatgatctaaaagaggtttttgaaaaatatggaacagttttg
gaggccaagattcccttgaaacctgatggaaaaatgcgagggtttgcatttgtgctgttt
aaaaatgtgtgtggagcagcaaaagcactaaaggcgatgaacctaaaggagataaaaggt
cgacctgttgcagttgactgggctgttcccaaggacaagtatactgcctcagcacagtca
tcacagtcaggcaacaagaaaacaatagaagcaaaagacactgatgacgaggatgaagaa
aagaacaaagtggtgcagccggtggaagagcccaagtcaaaggatgaagatgaaagtgag
gaggaagatgaggatgaagatggcagtgaggatgaagacggcggtgaggatgatgaaaac
aatgaagatgaccaagaagaagaggaagacgacgacaaggaggaggatgatgatgatgat
gatgataatagccttgattcagacagtgtacaagatgacagtgaggatgaggaggatgaa
gatgatcaatcagctaaaaggaaagctaagaaaaaacaacttccttctgatgtgaaagaa
ggccgaacagtttttataaggaacttgtcttttgacacggaagaagaaggactcgaggaa
gttctccttcagtacggagagcttaattacataaagatcgtcctccatccagacacggaa
cattcaaaaggttgtgcgtttgctcagtttaagaccaaagaagctgcagacaaatgtatt
gctgcagctcaggatgaagcagagaaggggggcatccgtgtggacggcagaaagctgtcg
gttgttgcagcagtgagcagagaagatgctgtcaagctaaaagatgataagaagaaagta
gaaacgggcagcaggaatctgtaccttgccagagaaggattgattcgctctgggaccaag
gctgcagaaggggtttctgaggcagacatggccaaaagaacaagatttgaggaaatgaaa
agagccaagcttcgggacatcagcgtgttcgtctccaaaactcgcctgtgcatccacaac
ctgcctaagtcagtggacaacaagaagctccgggcactctgccttcaagctgtgaaagga
gtcaaaggagttcggatcgtagagtgtcgagtcatgtatgacaggaagccagagaagggt
caggtggtcggacagtctctgggttatggtttcgttcagttccaggagcatgaacacgct
cttagcactctgcgttacctgaataataacccagacatcttcagcgcccacaagagacca
attgtggagttctctctggaagattcaaggaagctcaaaataaaagaaataagaaagcaa
aagcacaaggatttcctgaaaagtcatgctttcaagggagggaagcctcaacagaaatat
cctggagaagttaacagaactcagagaagtggagatgaagaacagtcaacgtctaaaaag
aaaggaaaagataaatggaatttcgaaaagcagaaccaacgcggattatattcgggcttc
aagaccaaagccgaggtcgagcatgtcgatttgcagaatggaaaaaagcgaaggaaggtt
ctacctttgccttctcaccgaggacctaagatcaggatgcgggacaaaggaaagcaacaa
gccccgccccccaagaaagcgaagccaggatccaaaagaaacaatcaaaggagattgcag
atcgaaaagccgtcacagcttagaaatcagaaggtccaaaatcaaaataataagcggttc
aagagaaaagatggcgaccgctttgagaacctggtggagcaatacaagaagaaactgttg
ggcagcgggaacaaaggagcaatcgtcaaaagaaacaagtggtttgatagttag

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