Oryzias melastigma (Indian medaka): 112152841
Help
Entry
112152841 CDS
T07439
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 6
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112152841
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
112152841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
RHG20_PH
IQ_SEC7_PH
PH_13
PH_15
FYVE_2
PH_20
STL11_N
Motif
Other DBs
NCBI-GeneID:
112152841
NCBI-ProteinID:
XP_024138406
Ensembl:
ENSOMEG00000012279
LinkDB
All DBs
Position
LG6:14870900..14887648
Genome browser
AA seq
1173 aa
AA seq
DB search
MYPGTGKPPVAPKPKLLISVLSPAPPRKEALLPPVSEKKLKPAIAPKPKSLIPLIAVESK
PAISISLHNKCALATTKTVGLLNTQNGVKDRGQNPDWDNITPVCLYCDGSCSCAENANGV
KTEEDHKVFQRNKAVPEGQGKLKNAISNNQTYATTHKTFNKRDASSPNGTEKVTNGRVLI
QSLLDKRVVNGTAKAMNDPEPRSQPMSGTPTKPVPVPRKPRTAAPVHQEKAVGERQNTAV
EKEREVDAKERKKSSDGKGGSSLSVSAPEPENKQQTQPAPPPRKKPFLSEPKKDPNSALR
TKEAQEEDTSWDSSIYDMEVSVDKEDDRIYKEGASNQEVGGFLLGSFRCRPVRTPVTANE
MFKETPKKPLRNQPPRKKSFREEHMDTPIGHQTRQVYTNQGNVFKNGGTKEPPPPNIKPP
GNLKSSHLSLTKSKAKSFTAADMTRSEGQKRSSFRKLLDSKLTITILPRPKLTGGQGTTP
TVNNSGPSYRQHHFDRRESFPQTGFEQNVDGDQSSESDEDGNYDTIDPYESYYQGNYMNV
PLRREKFSSGSHSHSYYDNDDEEDIYEMQDPYSSLNAHAEDNRTDLEQAYPNEIFSDFEL
EANSSEEDDGDNSSTSSKGDPELAEAQSERTKNKIQYIAKEIMTSESVFVDVLKLLHVDF
RESVNKASSYNGKPIIEERLLNQILYYLPQLYELNQDLLRELKQRVDNWDDNSQIADIFL
KKGPYLKMYSTYIREFDKNVALLEEQSRKNPAFGTVVREFEKSPRCANLALKHYLLKPVQ
RIPQYQLLLTDYLKNLSEGADGYEETKAALSLVKEVANHANDIIKHGDNFQKLIDVQHRL
NGNHQIIQPGRIFIKEGVLMKLSRKVMQPRMFFLFNDILLYTKPVQTGQYKLKNMLSLAG
MKVSKPNQEAYQNELNIESVERSFILSGSSAAERDEWLDSISAAINEFTKKKISFLSGSS
PNDADVRDGAPLGSKAPIWIPDPRTTMCMICTSEFTLTWRRHHCRACGKVVCQGCSSNRH
YLQYLKKSDRVCDLCFQTLKRELDNTLSLSPGVKSSMTFQKKQKRKPAALKEVSANTDDS
SMSGYLQRSKHKKKQWKRLWFVIKDKVLYTYAASEDVAAMESQPLLGFVLKYDSAQQLQF
RLFHKNTLYYNFKADDVQTVQRWINSFKEATIL
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtacccaggcactggcaagccacctgtggcacctaagccgaagttgctcatctctgta
ttatctcccgcacctcctagaaaagaagccctcttgcctcctgtctcagagaagaaactc
aaacccgccatagcccctaaacctaaatcactcatccctctcattgctgtggaatccaag
ccagccatttcaataagcttgcacaataaatgtgcattagcaaccaccaagactgtaggt
cttctgaacacacagaatggagtaaaagacaggggccaaaacccagattgggacaatatc
actcctgtttgcctgtattgtgatgggagctgctcttgtgctgaaaatgcaaatggagta
aaaacagaagaagaccacaaagtgtttcagagaaacaaggcagtgccagaaggacagggg
aaactaaaaaatgccatctctaacaatcagacttatgctaccacccataaaactttcaat
aagagagatgcctcaagtcctaacgggactgaaaaggtgactaatggaagggtgttaatt
cagagcttacttgacaaaagggttgtcaatggaacagcaaaggcaatgaatgacccagag
ccccggtcccaacccatgtcaggaaccccgacaaagcccgtccctgtaccacggaaaccc
agaaccgctgctccggtccaccaggaaaaggcggtgggggagaggcaaaacacagcagtg
gagaaagagagggaagtagatgcaaaagagaggaagaagtcatcagacggaaagggtggc
tcatccctttctgtcagcgcacctgagccagaaaacaagcagcagacccagcctgctcct
ccgcctagaaaaaagccttttctgtctgaacctaaaaaagatccaaactctgctcttcgg
actaaagaggcgcaggaggaagacaccagctgggacagcagcatctacgacatggaagtt
tctgttgacaaggaggacgataggatatacaaggaaggagccagtaatcaggaggtcggt
ggctttctgttggggagttttcgctgtagacctgtcaggacacctgtgactgcaaatgag
atgttcaaagaaactccaaagaagcctctgcggaaccaacctccaaggaagaaatctttc
agggaggaacacatggacacaccaataggccatcagacaaggcaagtctacacaaatcag
ggcaacgtcttcaaaaatgggggaacaaaagaaccacctcctccaaacattaaaccacct
ggaaacttgaagtcttcacacctcagccttaccaaatccaaagccaagtccttcactgct
gcggacatgactcgctctgaaggccagaagaggagctctttccgaaagctgctagactct
aagctcacaataacgatcctaccaagacccaagttgacaggaggtcaaggcacaactccc
actgtaaataattcgggtccaagttatcggcaacatcattttgatcggagagaatctttt
cctcaaacaggatttgaacagaatgtggatggagaccagtcttctgaatctgatgaggat
ggcaactacgacacaatagatccctatgaatcctactatcaaggaaactacatgaacgtg
cctctgaggcgggagaagttttcttcaggctctcattcacactcctactatgataatgat
gatgaagaagatatctatgagatgcaggacccctacagctccctgaatgcgcatgcagaa
gataacagaaccgacttggagcaggcttaccccaatgaaatcttctcggattttgaactc
gaagcgaattcctctgaagaggatgacggtgacaatagttccacctcaagtaaaggcgac
cctgagcttgcagaggcacagagtgaaaggacgaaaaacaagatacagtacatcgccaaa
gaaatcatgacttcggagagtgtgtttgttgatgtcctgaaactacttcatgtggacttc
cgtgaatcagtgaataaagcgtctagttacaatgggaagcccataattgaggaacgactg
ctcaaccagatcctctactaccttccgcagctgtatgagcttaaccaggacctgctcagg
gagctgaagcaaagagtggacaactgggatgataactcccagatagcagacatttttctg
aagaaagggccctatctaaagatgtactccacatacatccgtgagttcgacaagaatgtg
gctctgctggaagagcagagtagaaagaacccggcattcggcacggtcgtcagagaattt
gagaaaagtcctcggtgtgccaacttggctctgaagcactacctgttgaagcccgtccag
aggattcctcagtatcagctgctgctcacagattacctaaaaaatctctctgaaggagca
gatggctacgaagaaaccaaagcggccctttctctggtgaaagaagttgcaaatcatgca
aatgacatcataaaacacggggacaacttccagaaactgattgatgtgcagcatcgtcta
aatggcaatcatcagataatccagcctggacggatcttcattaaagaaggtgtcctgatg
aagctgtccaggaaagtcatgcagccccggatgttcttcctgtttaacgacattctgctg
tacaccaaaccagttcagactggccagtacaagctgaaaaacatgctgtctctggctggg
atgaaggtgagcaaaccaaatcaggaggcctatcagaacgaactcaacatagagagtgtg
gagcgttcttttattctatctgggagttcggctgcagagagagatgaatggctcgattca
atctcagcagcaatcaatgaattcaccaaaaagaaaattagctttttatctggaagttct
ccaaatgacgcagacgtgagggacggtgctcctttgggatccaaggcccccatctggatc
ccagatccgcgcaccaccatgtgcatgatttgcacgtctgagttcaccctgacgtggagg
cgacatcactgtcgagcgtgtggaaaggtggtgtgccagggctgctcctccaacagacac
taccttcaatacctgaaaaagtcagatcgagtgtgtgacctttgtttccaaacactaaaa
cgtgaattggacaacactttgtctctgtctcctggagtcaaatctagcatgacgtttcaa
aagaagcagaagagaaaacctgcagctctcaaagaggtgtcggcaaacacggatgactct
tccatgagtggatatctgcaaaggtcaaagcataaaaaaaagcagtggaagagactgtgg
ttcgtcatcaaagataaagtcctttacacatacgctgcaagtgaggatgttgcagccatg
gagagtcagcctctgttgggattcgtgctgaaatatgattctgcacagcagctgcagttt
agactctttcacaaaaacactctctattacaattttaaagctgatgatgtccaaacagtt
caaagatggatcaactctttcaaagaagccaccatcctgtga
DBGET
integrated database retrieval system
