Oryzias melastigma (Indian medaka): 112152864
Help
Entry
112152864 CDS
T07439
Symbol
cd44b
Name
(RefSeq) CD44 antigen isoform X1
KO
K06256
CD44 antigen
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112152864 (cd44b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oml04147
]
112152864 (cd44b)
04090 CD molecules [BR:
oml04090
]
112152864 (cd44b)
00535 Proteoglycans [BR:
oml00535
]
112152864 (cd44b)
00536 Glycosaminoglycan binding proteins [BR:
oml00536
]
112152864 (cd44b)
Exosome [BR:
oml04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112152864 (cd44b)
Exosomal proteins of other body fluids (saliva and urine)
112152864 (cd44b)
Exosomal proteins of colorectal cancer cells
112152864 (cd44b)
Exosomal proteins of bladder cancer cells
112152864 (cd44b)
CD molecules [BR:
oml04090
]
Proteins
112152864 (cd44b)
Proteoglycans [BR:
oml00535
]
Cell surface proteoglycans
Others
112152864 (cd44b)
Glycosaminoglycan binding proteins [BR:
oml00536
]
Hyaluronan
Cell surface receptors
112152864 (cd44b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
CR_prot_dom_plant
NEDD4_Bsd2
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
112152864
NCBI-ProteinID:
XP_024138442
Ensembl:
ENSOMEG00000012117
UniProt:
A0A3B3BZ46
LinkDB
All DBs
Position
LG6:24627725..24642324
Genome browser
AA seq
408 aa
AA seq
DB search
MWTFLFGVIFGLLASCSLAELDVSSRSCSFAGVFLAEGKSRHSLNFNDAQKVCEQLESTM
ATTQQLKEAYNSTMETCRYGWINNQSIAILRQNSHENCAKNMTGFLINSNVSPEDTYDVY
CFDEKVSKESKNCTKRFHRKELHQDAPVETTPQPGDESGEPPIFTKSPTEDGSENKTSKD
IFREEAMGEKADDTTQEPEDSFEFTEEILHEENVTNSVTDTYVPGELDHTAGSGMSPYVT
QKEDASAVTPVGGPGDAQEENSHTESKEEEPQTEENSQDKGPVDKRRSLQPDGTDKNPEK
SGNSDWLVVVGVIVGVAAILLVCVAYIKRKSLCSRQKTLMITSKDGTEGNGTAAAAAAAS
TVASSSLSQDRDQEMVTLMNKETLQENGNTEEFTVIKLEESPDQDKQA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtggacttttctattcggggtcatctttggattactggcctcctgcagtttggctgaa
cttgacgtgagctctcgctcctgcagctttgctggggtttttctggctgaaggaaaatct
cgccactctctaaacttcaacgacgctcaaaaggtgtgtgaacagttggagagcaccatg
gcaaccacacagcaacttaaggaagcttataattcaaccatggaaacctgcaggtacggt
tggattaacaaccagagcattgccatcctcagacagaattcccatgaaaactgtgcaaaa
aacatgacaggtttcctcattaattccaacgtttcccctgaagacacgtatgatgtttac
tgctttgatgaaaaagtgtcgaaggagtctaagaactgcactaagagatttcacagaaaa
gaactccaccaggatgctcccgtcgagactacaccacagccaggggatgagtcaggggag
ccaccaatctttacaaaatcaccaacagaagatggctctgaaaataaaacctccaaggac
atttttcgggaggaggccatgggcgagaaggctgacgacaccacacaagagccagaggat
tcctttgagtttactgaggaaatcctccatgaagaaaatgtcaccaacagtgtgactgac
acctacgttcctggggaactggaccacacggctggatctgggatgtcaccatatgtcact
cagaaggaggacgcctctgcagtgacccctgttggagggccgggagacgcacaagaggaa
aacagtcacactgagtccaaagaagaggaaccacagactgaagaaaactctcaggataaa
ggacccgtggataagaggcgttccctgcagcctgatggcactgacaaaaacccagaaaaa
agtggaaattcagactggctggtggttgttggagtgatcgtgggagtcgcagccattctt
ctggtgtgtgtggcctacataaaaagaaaaagcttgtgcagcaggcagaaaaccctcatg
atcacatccaaagatggcactgagggtaacgggacggcagcagcggccgccgccgcctcc
acagtggcttccagctctctcagccaggacagagaccaggagatggtgaccctcatgaac
aaagagacgcttcaggagaacggtaacacggaagagttcacggtcattaagctggaggag
tcgccagatcaggacaagcaggcgtga
DBGET
integrated database retrieval system