KEGG   Oryzias melastigma (Indian medaka): 112152864
Entry
112152864         CDS       T07439                                 
Symbol
cd44b
Name
(RefSeq) CD44 antigen isoform X1
  KO
K06256  CD44 antigen
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:oml00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    112152864 (cd44b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oml04147]
    112152864 (cd44b)
   04090 CD molecules [BR:oml04090]
    112152864 (cd44b)
   00535 Proteoglycans [BR:oml00535]
    112152864 (cd44b)
   00536 Glycosaminoglycan binding proteins [BR:oml00536]
    112152864 (cd44b)
Exosome [BR:oml04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112152864 (cd44b)
  Exosomal proteins of other body fluids (saliva and urine)
   112152864 (cd44b)
  Exosomal proteins of colorectal cancer cells
   112152864 (cd44b)
  Exosomal proteins of bladder cancer cells
   112152864 (cd44b)
CD molecules [BR:oml04090]
 Proteins
  112152864 (cd44b)
Proteoglycans [BR:oml00535]
 Cell surface proteoglycans
  Others
   112152864 (cd44b)
Glycosaminoglycan binding proteins [BR:oml00536]
 Hyaluronan
  Cell surface receptors
   112152864 (cd44b)
SSDB
Motif
Pfam: Xlink CR_prot_dom_plant NEDD4_Bsd2 Adeno_E3_CR2
Other DBs
NCBI-GeneID: 112152864
NCBI-ProteinID: XP_024138442
Ensembl: ENSOMEG00000012117
UniProt: A0A3B3BZ46
LinkDB
Position
LG6:24627725..24642324
AA seq 408 aa
MWTFLFGVIFGLLASCSLAELDVSSRSCSFAGVFLAEGKSRHSLNFNDAQKVCEQLESTM
ATTQQLKEAYNSTMETCRYGWINNQSIAILRQNSHENCAKNMTGFLINSNVSPEDTYDVY
CFDEKVSKESKNCTKRFHRKELHQDAPVETTPQPGDESGEPPIFTKSPTEDGSENKTSKD
IFREEAMGEKADDTTQEPEDSFEFTEEILHEENVTNSVTDTYVPGELDHTAGSGMSPYVT
QKEDASAVTPVGGPGDAQEENSHTESKEEEPQTEENSQDKGPVDKRRSLQPDGTDKNPEK
SGNSDWLVVVGVIVGVAAILLVCVAYIKRKSLCSRQKTLMITSKDGTEGNGTAAAAAAAS
TVASSSLSQDRDQEMVTLMNKETLQENGNTEEFTVIKLEESPDQDKQA
NT seq 1227 nt   +upstreamnt  +downstreamnt
atgtggacttttctattcggggtcatctttggattactggcctcctgcagtttggctgaa
cttgacgtgagctctcgctcctgcagctttgctggggtttttctggctgaaggaaaatct
cgccactctctaaacttcaacgacgctcaaaaggtgtgtgaacagttggagagcaccatg
gcaaccacacagcaacttaaggaagcttataattcaaccatggaaacctgcaggtacggt
tggattaacaaccagagcattgccatcctcagacagaattcccatgaaaactgtgcaaaa
aacatgacaggtttcctcattaattccaacgtttcccctgaagacacgtatgatgtttac
tgctttgatgaaaaagtgtcgaaggagtctaagaactgcactaagagatttcacagaaaa
gaactccaccaggatgctcccgtcgagactacaccacagccaggggatgagtcaggggag
ccaccaatctttacaaaatcaccaacagaagatggctctgaaaataaaacctccaaggac
atttttcgggaggaggccatgggcgagaaggctgacgacaccacacaagagccagaggat
tcctttgagtttactgaggaaatcctccatgaagaaaatgtcaccaacagtgtgactgac
acctacgttcctggggaactggaccacacggctggatctgggatgtcaccatatgtcact
cagaaggaggacgcctctgcagtgacccctgttggagggccgggagacgcacaagaggaa
aacagtcacactgagtccaaagaagaggaaccacagactgaagaaaactctcaggataaa
ggacccgtggataagaggcgttccctgcagcctgatggcactgacaaaaacccagaaaaa
agtggaaattcagactggctggtggttgttggagtgatcgtgggagtcgcagccattctt
ctggtgtgtgtggcctacataaaaagaaaaagcttgtgcagcaggcagaaaaccctcatg
atcacatccaaagatggcactgagggtaacgggacggcagcagcggccgccgccgcctcc
acagtggcttccagctctctcagccaggacagagaccaggagatggtgaccctcatgaac
aaagagacgcttcaggagaacggtaacacggaagagttcacggtcattaagctggaggag
tcgccagatcaggacaagcaggcgtga

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