Oryzias melastigma (Indian medaka): 112152883
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Entry
112152883 CDS
T07439
Symbol
pard6a
Name
(RefSeq) partitioning defective 6 homolog alpha isoform X1
KO
K06093
partitioning defective protein 6
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04144
Endocytosis
oml04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112152883 (pard6a)
09144 Cellular community - eukaryotes
04530 Tight junction
112152883 (pard6a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112152883 (pard6a)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
112152883 (pard6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PB1
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
112152883
NCBI-ProteinID:
XP_024138493
Ensembl:
ENSOMEG00000021008
LinkDB
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Position
LG6:708805..732045
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AA seq
389 aa
AA seq
DB search
MSRASQSRTPTRAAESVVEVKSKFEAEYRRFGLKRTVAGNFQEFYRFLQSIHHIRGMDVR
LCYADIHGDLLPINNDDNFDKAVKSANPLLRIVIITKTDDDSMVFATNSLQRRKKVMTLP
GLNPGATHSRGKSVPQIGPPQDFRQISSIIDVDILPEAYRRVRLHKHGTNKPLGFYIRDG
VSVRVTPHGVEKAPGVFISRVVRGGLAESTGLLAINDEIIEVNGIEVAGKSLDQVTAMMV
ANSHNLVVTVKPANQRNNVYRGSKTSVGNTGSVGSAGSIGSALSHDSPSPASQSNPITAS
SSQAEGDSDDEDDEGDIILESDGLNPYSRDSARNGAAAAGRPFPQSVSMPNSMGASLSNS
ASYSQDRNHNHAGSSGRERMREDGNMITL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtccagagcgtcgcagagccgcacgcccacccgggcggcggagagcgtggtggaggtc
aagagcaaatttgaagcagagtaccgccgctttggcttgaagaggactgtagcgggaaac
ttccaggagttctaccgcttccttcaaagcatccaccacatccgggggatggacgtgcgg
ctgtgctacgccgacatccacggagacctccttccaatcaacaacgacgacaacttcgac
aaggcggtgaaatccgccaatccactgctgcgcatcgtcatcatcactaagacagatgat
gattccatggtttttgccaccaactccctgcaaaggcgcaagaaggtgatgaccctacca
ggactgaatccaggcgccacacactccagaggaaaatctgtcccccagattggtccgcca
caggacttcagacagatctcctccatcatcgacgtggacatcctgccggaggcatacaga
cgggtgcggctgcacaagcacggcaccaacaaacctctgggcttctacatccgagacggt
gtgagcgtgcgggtgacgcctcacggggtggagaaggctccgggggtgttcatatcccgc
gtggtgcgggggggcctcgctgaaagcacaggtctgctggccatcaacgacgaaatcatc
gaggtcaacggcatcgaggtggcagggaagtctctggatcaggttacagcgatgatggtg
gctaacagccacaacctcgtcgtgacggtcaaaccagccaatcagaggaacaacgtttat
cgcggcagcaaaacctccgtggggaacactggctccgtgggctcggctggctccatcggc
tctgctctgtcacatgactctccaagccccgcctcccagagcaatcccatcactgccagc
agcagccaggctgagggtgacagcgacgatgaggacgacgagggagacatcatcctggag
agcgacggcctgaacccctacagcagagactccgcaaggaacggcgccgccgccgcagga
cgaccgttccctcagagcgtctccatgcccaacagcatgggagcgtcgctcagcaacagc
gcctcctacagccaggacaggaaccacaaccacgccggcagcagcgggagggagaggatg
agggaggacggaaacatgataacactgtga
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