Oryzias melastigma (Indian medaka): 112152897
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Entry
112152897 CDS
T07439
Symbol
det1
Name
(RefSeq) DET1 homolog
KO
K10571
de-etiolated-1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112152897 (det1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112152897 (det1)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
112152897 (det1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
112152897
NCBI-ProteinID:
XP_024138516
Ensembl:
ENSOMEG00000013283
UniProt:
A0A3B3DHG8
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Position
LG6:complement(25912719..25925935)
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AA seq
551 aa
AA seq
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MDDDVPTLKPRLIQNQNVVHRLERRRICSGRPGAHWYRVRCFHQNLFPNFTVVNVEKPPC
FLRKFSPDGRCFIAFSSDQTSLEIYEYQGCQAAQDLLRNQEGETLSTANDQRSLNIRGRL
FERFFSLLHVTNVASNGEHLNRECSLFTDDCRYVIVGSAVYVPEEPPPYFFEVYRNNESV
TPNPRSPLEDYSLHIIDLHTGRLCDTRSFKCDKIILSHNQGLYLYRNILAVLSVQQQTIH
VFQVTPEGTFLDVRTIGRFCYEDDLLTLSAVYPEAQAESQPGFPRLYTDKTINSLKHRLL
VYLWRRAEQDGSATAKRRFFQFFDQLRRLRMWKMQLLDEHHLFIKYTSEDVVTLRVTDPS
QPSFFVVYNMVSTKVLAVFENTSDQLLELFENFCDLFRNATLHSQAVQFPCSASSNNYAR
QVQRRFKDTIVNAKYGGHTEAVRRLLGQLPISAQSYSSSPYLDLSLFSYDDKWVSVMERP
KTCGDHPIRFYARDSGLLKFKIQAGLLGRPVNHAVRRLVAFTFHPFEPFAISVQRTNAEY
VVNFHMRHNCA
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgacgtcccgacactgaagcccagactcatccagaatcagaacgtcgtccat
cgtctggaaagacgaaggatctgctctggtagacccggagctcattggtacagagttcgc
tgctttcatcaaaacctgttccccaacttcaccgtagtcaatgtggaaaagccaccctgc
tttctcaggaagttttctccagacggacgatgcttcatcgccttctcctctgatcagaca
tccttggaaatctatgaataccagggctgccaggcggcccaggacctcctgaggaaccag
gaaggagagactctttccactgccaacgaccagcgctccctcaacatcagaggccggctg
ttcgagcgcttcttctctttgctgcatgtcactaacgtggcctcgaatggagaacacctt
aaccgggagtgcagtctcttcacagacgactgccgctacgtcatagtcgggtcagctgtc
tacgtcccagaagaaccgccgccgtatttctttgaagtgtatcgcaacaacgaatccgtg
actccaaacccacggtctccgctggaagactactctcttcatattattgacctccacacg
ggtcggctgtgtgacacccggtcctttaagtgcgacaagatcatcctgtcgcacaaccag
ggtctgtacctctacagaaacatcctagctgtgctgtctgtccagcagcagaccatccac
gtcttccaggtgactcctgaaggaacgtttctggatgtaaggactatcgggcgcttctgc
tacgaggacgacctcctaaccctgtcagccgtttacccagaagctcaggcagagagtcag
cccggctttccgcggctgtacaccgacaaaaccataaactctctgaagcaccggctgctg
gtttacctgtggaggagggcggagcaggacgggagtgccactgccaagaggaggtttttc
cagttttttgatcagctgaggcggctgaggatgtggaagatgcagctgctggacgagcac
cacctcttcatcaagtacaccagcgaggacgtggtcacgctcagagtcaccgacccttcg
cagccgtcgttctttgtggtctacaacatggtgtccaccaaagttctggccgtcttcgag
aacacatcggatcagctgctggagctctttgaaaacttctgcgacctcttcagaaatgca
accctgcacagccaggccgtccagttcccgtgctccgcctcgtccaacaactacgcccgg
caggtccagaggaggttcaaagacaccatagtgaacgccaaatatggcggccacacggaa
gccgtacgtcggctgctcggccagctgcccatcagcgcccagtcgtacagcagcagcccc
tatctggacctgtcgctcttcagctacgacgacaagtgggtgtctgtgatggagaggccc
aagacctgtggagatcaccccatcaggttttacgctcgagattccggtctactgaagttt
aaaatccaggcggggctgcttggacgacctgtgaatcacgccgtccgtcgcctggtcgcc
ttcactttccacccgtttgagccttttgcaatctctgtgcagcgcaccaacgcggagtac
gtggtcaacttccacatgaggcacaactgtgcgtga
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