KEGG   Oryzias melastigma (Indian medaka): 112152897
Entry
112152897         CDS       T07439                                 
Symbol
det1
Name
(RefSeq) DET1 homolog
  KO
K10571  de-etiolated-1
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    112152897 (det1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oml04121]
    112152897 (det1)
Ubiquitin system [BR:oml04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     112152897 (det1)
SSDB
Motif
Pfam: Det1
Other DBs
NCBI-GeneID: 112152897
NCBI-ProteinID: XP_024138516
Ensembl: ENSOMEG00000013283
UniProt: A0A3B3DHG8
LinkDB
Position
LG6:complement(25912719..25925935)
AA seq 551 aa
MDDDVPTLKPRLIQNQNVVHRLERRRICSGRPGAHWYRVRCFHQNLFPNFTVVNVEKPPC
FLRKFSPDGRCFIAFSSDQTSLEIYEYQGCQAAQDLLRNQEGETLSTANDQRSLNIRGRL
FERFFSLLHVTNVASNGEHLNRECSLFTDDCRYVIVGSAVYVPEEPPPYFFEVYRNNESV
TPNPRSPLEDYSLHIIDLHTGRLCDTRSFKCDKIILSHNQGLYLYRNILAVLSVQQQTIH
VFQVTPEGTFLDVRTIGRFCYEDDLLTLSAVYPEAQAESQPGFPRLYTDKTINSLKHRLL
VYLWRRAEQDGSATAKRRFFQFFDQLRRLRMWKMQLLDEHHLFIKYTSEDVVTLRVTDPS
QPSFFVVYNMVSTKVLAVFENTSDQLLELFENFCDLFRNATLHSQAVQFPCSASSNNYAR
QVQRRFKDTIVNAKYGGHTEAVRRLLGQLPISAQSYSSSPYLDLSLFSYDDKWVSVMERP
KTCGDHPIRFYARDSGLLKFKIQAGLLGRPVNHAVRRLVAFTFHPFEPFAISVQRTNAEY
VVNFHMRHNCA
NT seq 1656 nt   +upstreamnt  +downstreamnt
atggacgacgacgtcccgacactgaagcccagactcatccagaatcagaacgtcgtccat
cgtctggaaagacgaaggatctgctctggtagacccggagctcattggtacagagttcgc
tgctttcatcaaaacctgttccccaacttcaccgtagtcaatgtggaaaagccaccctgc
tttctcaggaagttttctccagacggacgatgcttcatcgccttctcctctgatcagaca
tccttggaaatctatgaataccagggctgccaggcggcccaggacctcctgaggaaccag
gaaggagagactctttccactgccaacgaccagcgctccctcaacatcagaggccggctg
ttcgagcgcttcttctctttgctgcatgtcactaacgtggcctcgaatggagaacacctt
aaccgggagtgcagtctcttcacagacgactgccgctacgtcatagtcgggtcagctgtc
tacgtcccagaagaaccgccgccgtatttctttgaagtgtatcgcaacaacgaatccgtg
actccaaacccacggtctccgctggaagactactctcttcatattattgacctccacacg
ggtcggctgtgtgacacccggtcctttaagtgcgacaagatcatcctgtcgcacaaccag
ggtctgtacctctacagaaacatcctagctgtgctgtctgtccagcagcagaccatccac
gtcttccaggtgactcctgaaggaacgtttctggatgtaaggactatcgggcgcttctgc
tacgaggacgacctcctaaccctgtcagccgtttacccagaagctcaggcagagagtcag
cccggctttccgcggctgtacaccgacaaaaccataaactctctgaagcaccggctgctg
gtttacctgtggaggagggcggagcaggacgggagtgccactgccaagaggaggtttttc
cagttttttgatcagctgaggcggctgaggatgtggaagatgcagctgctggacgagcac
cacctcttcatcaagtacaccagcgaggacgtggtcacgctcagagtcaccgacccttcg
cagccgtcgttctttgtggtctacaacatggtgtccaccaaagttctggccgtcttcgag
aacacatcggatcagctgctggagctctttgaaaacttctgcgacctcttcagaaatgca
accctgcacagccaggccgtccagttcccgtgctccgcctcgtccaacaactacgcccgg
caggtccagaggaggttcaaagacaccatagtgaacgccaaatatggcggccacacggaa
gccgtacgtcggctgctcggccagctgcccatcagcgcccagtcgtacagcagcagcccc
tatctggacctgtcgctcttcagctacgacgacaagtgggtgtctgtgatggagaggccc
aagacctgtggagatcaccccatcaggttttacgctcgagattccggtctactgaagttt
aaaatccaggcggggctgcttggacgacctgtgaatcacgccgtccgtcgcctggtcgcc
ttcactttccacccgtttgagccttttgcaatctctgtgcagcgcaccaacgcggagtac
gtggtcaacttccacatgaggcacaactgtgcgtga

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