Oryzias melastigma (Indian medaka): 112153113
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Entry
112153113 CDS
T07439
Symbol
pdlim7
Name
(RefSeq) PDZ and LIM domain protein 7
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112153113 (pdlim7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112153113 (pdlim7)
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
112153113 (pdlim7)
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
112153113
NCBI-ProteinID:
XP_024138803
Ensembl:
ENSOMEG00000009270
UniProt:
A0A3B3BS32
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Position
LG10:complement(18475060..18508400)
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AA seq
425 aa
AA seq
DB search
MNLYTVTLSGPAPWGFRLQGGKDFSMPLTVSRLTPGGKAAQAGVGVGDWVVSICDANAEE
MTHVEAQNKIRAATDSLTLSLSRGPKVGEERKDSHTASSAQPKYSFAPSTTINKMARPFS
AGGGSASSGPVIKPVAYSPKLNTPHSQGNASTQQPQNGLEPTTSSPKTQAAEKPDGSKTG
AAAAPPRSGPTSRPPWVTDPGFADRFHPDKTSTVVTQHQQPAQLTPKQNRSSIMQAAQQA
PEDSGRTPVCGACNKIIRGRYLVALGRSWHPEEFTCSQCKAVLEEGGFFEERGSVYCTKC
HDNRYAPNCAKCKKKITGEIMHALKMTYHVQCFKCAACKTPIRNQAFYMEEGEPYCEKDY
EKMFGTKCHGCDFKIDAGDRFLEALGFSWHDTCFVCALCQINLEGKTFYSKKDKPLCKSH
AFAPV
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgtacactgttaccctcagtggcccagcgccatggggcttcaggctgcaggga
ggcaaggacttcagcatgcccctcaccgtgtcaaggctgactccaggtggaaaggcagcc
caggctggagttggggtgggagactgggtggtttcgatctgtgatgccaacgctgaagag
atgactcatgtggaggcgcagaacaagattagagcagcaacagactccctcaccctcagc
ctcagcagaggtcctaaagtgggtgaagagcgaaaggattcacatacggcaagttctgct
cagccaaagtactcctttgccccaagcacaaccattaacaagatggcgaggccattttca
gcaggtggtggcagtgccagctcaggacccgttattaaacctgtggcctattcgcccaaa
cttaacaccccgcactcacagggcaatgccagtacacagcagccacagaatggccttgag
ccaactacctcttctccaaagacccaggctgcggagaaaccagatggatctaaaaccgga
gctgcagcggcaccgccacgctctggaccaacctcccgcccgccctgggtcacagacccg
ggctttgccgatcgctttcaccccgacaagaccagcaccgtggtgacccaacaccagcag
cctgcccaactcacacccaagcagaaccgcagctccatcatgcaggcggcgcagcaggca
cccgaggacagcggcaggaccccagtgtgtggcgcctgcaataaaatcatcaggggtcgg
tacctggtggcgctgggtcgctcctggcacccagaagagttcacgtgctcacagtgtaag
gcggtcctggaggagggcggcttctttgaggagagaggctccgtctactgcaccaagtgc
cacgacaaccgatacgcgcccaactgtgccaagtgcaagaagaaaatcacaggggaaatc
atgcacgccctcaagatgacctaccacgttcagtgcttcaaatgtgccgcctgcaagact
cccatcaggaaccaggccttttatatggaggagggggagccctactgtgagaaagactac
gagaagatgtttggcaccaaatgccacggttgcgacttcaagattgatgccggcgatcgt
ttcctggaggccttgggcttcagctggcatgacacgtgcttcgtctgtgctctctgccaa
atcaaccttgagggtaagacgttctactcgaagaaggataagccgctgtgcaaaagccac
gcttttgctccagtgtga
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