Oryzias melastigma (Indian medaka): 112153145
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Entry
112153145 CDS
T07439
Name
(RefSeq) histone deacetylase 3
KO
K11404
histone deacetylase 3 [EC:
3.5.1.98
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112153145
Enzymes [BR:
oml01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
112153145
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
112153145
HDAC complexes
SMART complex
112153145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
112153145
NCBI-ProteinID:
XP_024138872
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Position
LG10:23349211..23355848
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AA seq
428 aa
AA seq
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MSIRTSYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMCR
FHSEDYIDFLQKVSPNNMQGFTKSLNTFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNH
KICDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEA
FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVI
KQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKSFKIPLLVLGGGGYTV
RNVARCWTYETSLLLEESISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRQ
TVFENLKMLNHAPSVQIHDVPSDMLNYERTDDPDPDERGAEENYTRQEAANEFYDGDHDN
DKESDVEI
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtctattaggacgtcttacttttacgacccagatgtgggaaactttcattatggtgct
ggtcatcccatgaagcctcaccgtttgtccctcacccacagtctggtgttgcactatggc
ctctataagaagatgatggttttcaagccgtacaaagcctctcagcacgacatgtgtcgg
ttccactctgaagattacatagacttcctgcagaaggtcagccccaacaacatgcagggc
ttcaccaagagcctgaacaccttcaacgtaggagatgactgtcctgtgtttccaggtctg
tttgagttctgttccagatacaccggagcgtctctgcagggcgccacgcagctcaaccac
aagatctgtgacatcgccatcaactgggctggaggtttacatcacgccaaaaaatttgag
gcgtcggggttttgctacgtgaacgacatcgtcatcagcatcctggagcttctaaagtac
cacccccgcgttctgtacatcgacatcgacattcaccatggcgacggggtccaggaggcc
ttctacctgacggacagagtcatgaccgtgtccttccacaagtacgggaactacttcttc
ccgggaacaggtgacatgtacgaggtgggggccgagagcggccgctactactgcctgaac
gtcccgctgcgagacggcatcgatgaccagagttacaggcagctgttccagccggtcatc
aagcaggtggtggatttctaccagcccacctgcatcgtcctgcagtgtggagccgattct
ctgggctgtgacagactgggctgcttcaacctcagcatacggggacacggggagtgcgtg
gagttcgtgaagagttttaagattcctctgttggtgctcggaggaggagggtacactgtg
aggaacgtggctcgctgctggacctacgagacgtctctgttgctggaggagtccatcagt
gacgagctgccgtacagcgaatatttcgagtactttgctccagacttcactctgcatcct
gatgtcagcaccaggatcgagaaccagaactccagacagtacctggaacagatccgtcag
accgtgtttgagaacctgaagatgctgaaccacgcgcccagcgtccagatccacgacgtc
ccgtcagacatgctgaactacgagcgcacagacgaccccgacccggacgagaggggagct
gaggagaactacacccgacaagaggcagccaacgaattctacgacggcgaccatgacaac
gacaaagagagcgacgtagaaatttaa
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