Oryzias melastigma (Indian medaka): 112153198
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Entry
112153198 CDS
T07439
Symbol
tbc1d2
Name
(RefSeq) TBC1 domain family member 2A
KO
K20165
TBC1 domain family member 2A
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112153198 (tbc1d2)
Membrane trafficking [BR:
oml04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112153198 (tbc1d2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
PH_11
PH_3
DUF3715
PH_8
Motif
Other DBs
NCBI-GeneID:
112153198
NCBI-ProteinID:
XP_024138951
Ensembl:
ENSOMEG00000010063
LinkDB
All DBs
Position
LG10:2703..19192
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AA seq
1100 aa
AA seq
DB search
MDGSGAAGNPSAASSSSLPGPADEGVLPPTSSAEEGDAQCRESVVLSPAEKPDLPDHQHS
ITAEPKPPFEDQPSPQHTCLGQPEQAKPDLPPAQQELPDCLLIEDPSSLEQISDYSLCTD
QKNPEGLPGPEHDKELNQAVEPLNQKHLGLTDQISVKEQLPGSFVEVRDEERKPILESTP
DCNPTTTLAPPAPPLTIEAFCDQVGPRPPAAPSGEPKLCGYLQKQGGPLKSWKQRWFTYE
EKKNQLFYYRTAQDVMPLGQVELSGATFTYPLKAETGTFHIQTPERTFILKAVTQELMYY
WLQQLQAKRWQHRQTATCADTTNNNNTTAEDFLPTLKGPLGLVGEEAANTQTQRTPLTNM
SLKHPLIEIQNSVHSLRKRSSQEGGSQSIFHVSASAWTQPSSADSSNTADAPDEPSIHPP
RPPPPPPPVPVPADSAGQESPAPGRASPSLLDRRARRTKTCSSSTMPIRRRDTVSPSSER
SSRLQQEKQMLMEEVKAQKELVWILHKALEASQLEKRACVEFLAVDDEQERLELLRHRER
HAADLQRRLEEANMEAEVLRKSLAERDVQLAELQYRIKILTEKNQAKHQVIVKLSDQVTS
CLSDCRHKDPSSSEPPTLRELLQKIENLKDDIEAYKTQNKFLNSEIHQLTKLWRKSSEQE
KSLMVKCAYLEATNCQVESRYLGVLRKLQETKSLDPDQREAVQKMIEDALTGELHSVIKL
SVDRDHDAYGFKIIPDYEVEDMKLLAKIQALEIRSHNLLNQEGAEHPLLSRWAHFLAGRS
QDDLCPSPELKTLLRGGVPREYRPRVWRWMVRARTRTIWEHHPQLYEQLCEKSRTFPHPA
TRQIQLDLHRTLTTNQHFSSPSSPALQELRRILLSFSWHNPMVGYCQGLNRLAAIALLVL
QDEEDAFWCLVAVVETIMPQDYYTKNLMASQADQRVLKDFLAEKLPRLAAHFDKHNIDVT
LITFNWFLVAFVESLPSDILLPLWDAFLYEGTKVIFRYALALFKYKEDDILKINDGVEIY
QYLRFFTKTISDSRRLTSIAFGDMNPFPRRLLRNRRTQHVERLQKELHELEELQKEFVTE
RAEHKDKELDMGASEDDEEL
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggatggaagcggagctgcaggaaatcccagtgctgcctcgtctagctcacttcctggc
cctgctgatgagggggttctgcctccaacctccagcgcggaggagggagacgctcagtgc
agagagtccgtcgttctgtctccagcagagaaaccagaccttccagaccatcaacacagc
atcacagcagaaccaaaaccaccttttgaagatcagccgagtcctcaacacacctgtctg
ggtcaacctgagcaagcaaagccagatcttcctcctgcacagcaagaactgccagactgt
ctcctgatagaagatccgtcttcattagaacagatttcagactattcactttgtacagac
cagaagaatccggagggtcttcctggaccagagcacgacaaggaactgaatcaagctgtg
gaacccctaaaccagaagcatctgggtctcacagaccaaatttctgtgaaggagcagctt
cccggttcctttgtggaggtacgtgacgaggagaggaaacccatcctggagagcacccca
gactgtaaccccaccaccaccctggctcctccagccccgcctctcaccatcgaggcgttc
tgtgaccaggtgggacctcgtccacctgccgctccttcaggtgagcccaaactatgtggc
tacctgcagaagcaggggggcccgctgaagtcctggaagcagcgctggttcacctacgaa
gagaagaagaaccagctgttctactaccgcacggcacaggacgtgatgccgctcggccag
gtggagctcagcggggccaccttcacgtacccactgaaggcagaaaccggcacctttcac
atccagacacctgaacgcaccttcattctgaaggccgtgacccaggagctcatgtattac
tggctgcagcagctgcaggcaaagcgctggcagcacaggcagaccgccacctgcgcagac
acaacaaacaacaacaacacaactgcagaggacttcctgcccacattgaaggggcctctg
ggtctggtcggggaggaggcggccaacactcagacacagcggacgcccctcaccaacatg
tcactcaaacaccctctgattgagatccaaaactcggtccactctttaagaaagagatcg
tctcaggagggggggagtcagagcattttccatgtcagcgcttcagcgtggactcagccc
agttctgcagacagcagcaacactgcagacgctcctgatgagccttctattcatcctcct
cgtcctcctcctcctccacctcccgttcctgtaccagctgattcagcaggtcaggagtct
cctgctcctggaagagcatccccatcactgttggacagaagagccaggaggacaaagact
tgcagctcgtccaccatgccaattcggcgcagagacactgtgtccccatcctcagagcgg
tcgtcccgcctgcagcaggagaagcagatgctgatggaggaggtcaaagctcagaaggag
ctggtctggatcctccacaaagccctggaggcatctcaactagagaaacgagcatgtgtg
gagtttttggcggtggacgacgagcaggagcgcctggagctgctgcgacaccgtgagcgg
cacgcggccgacctgcagagacggctggaggaggccaacatggaggccgaggttctgagg
aagagcctggctgagagagacgtgcagctggctgagctgcagtacagaatcaagatcctt
acagagaagaaccaggccaagcatcaggtgattgtgaagctgtctgatcaggtgacctcc
tgcctgtctgactgccgacacaaagacccttcatcttctgaacctccaactttgagggag
cttctgcagaagatagagaatctgaaggatgacattgaggcttacaagactcagaacaaa
tttctgaactcagaaatccaccagttgaccaaactgtggaggaagagctccgagcaggag
aagagcctgatggtgaagtgtgcctacttggaggccacgaactgtcaggttgaaagtcgt
tacttgggtgttctgcggaaactgcaggagaccaaatctttggacccagaccagcgggag
gccgtgcagaaaatgattgaggacgctctcacaggagaactgcacagtgtcatcaagctc
agcgtggacagagatcatgatgcttatggctttaagatcatcccagactatgaagtggaa
gacatgaagctgctggcaaagatccaggctctggaaatccgttcacacaacctactgaac
caggagggggcggagcaccccctgctgagccgctgggcgcacttcctggctggcaggtca
caagacgacctgtgcccctcgcctgaactcaaaactctgctgcgcggcggcgtcccccgg
gagtatcgaccgagggtgtggcgctggatggtccgagccagaaccagaacgatctgggag
caccacccacagctctacgagcagctgtgtgagaagagtagaacattccctcatcccgcc
acccggcagatccaactagaccttcaccgcaccttaacgactaatcagcacttttcgtca
ccatcaagccccgccctccaggagctccgccgcattctgctgtcattctcttggcacaac
ccaatggtggggtactgccagggcctcaacaggttggcggccattgctctgctcgtcctg
caggacgaagaggacgccttctggtgtctggtagctgtggttgaaaccatcatgcctcaa
gattactacaccaaaaacctgatggcctctcaggcagatcagagggtcctgaaggacttc
ctggcggagaagcttccacggctggcggcgcactttgacaaacacaacatagacgtcacc
ctcataaccttcaactggttcttggtggcttttgtggaaagtctgccgagtgacatcctg
ctgccgctgtgggacgcttttctctatgagggcacgaaggtgatcttcaggtacgctctg
gctcttttcaaatacaaagaggacgacatcctgaagataaacgatggagtggagatctac
cagtacctgcgcttcttcactaagaccatctcagacagcaggagactgaccagcattgcc
tttggagacatgaacccgttcccacgccgcctgctgaggaaccggcgcacgcagcatgtg
gagcggctgcagaaggagctgcatgagctggaggagctgcagaaggagtttgtgacagag
agagccgagcacaaagacaaggagctggacatgggggccagtgaggatgacgaagagctc
tga
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