Oryzias melastigma (Indian medaka): 112153227
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Entry
112153227 CDS
T07439
Symbol
zbed4
Name
(RefSeq) zinc finger BED domain-containing protein 4
KO
K24640
zinc finger BED domain-containing protein 4
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112153227 (zbed4)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
112153227 (zbed4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
Flu_PB2_4th
zf-C2H2_12
DUF4404
Motif
Other DBs
NCBI-GeneID:
112153227
NCBI-ProteinID:
XP_024139026
Ensembl:
ENSOMEG00000015204
LinkDB
All DBs
Position
LG23:7589300..7601754
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AA seq
1252 aa
AA seq
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MDGEEEVPHMSEDLIIESNGLIESKKREAKASCLKIEGQDGYVFKSYSIHPHDDDEDPKS
LACSSTLDKDILPCFHFTSQMDKRLEIDLACNTGPSSPNTDTEGNAETEKYENGNESSEL
AREDIEDANGMEDEPQDDERLAFGSSIGPFATKDVDDYSNLLSGYTSTLYDVAMDAVTQS
LLSSIRGHANPRKKSPAWNHFCISPRDNTKAICLYCMKEFSRGKNEKDLSTSCLMRHVRR
AHPTVLLQDGADVSLSNLSSSLPSPFLPFPPSSPKNGDLTNCIFTPASKNSSPSTSSAEN
SDPSSKETLPKVEPKLESCANADTVYGSLLPSHSIENNVEEMSDGGSERLPGTPKGSNSR
RRSAVWKHFYLSPADNSKAVCIHCMNEFSRGKNGKDLGTSCLIRHMWRAHKEVVIEENGQ
GNHIPPPYTNPPSLLSRTQLLDSFEVKKESPLLPSSPETIADELPQSIEESMDIKEECEE
VMQLSGQDSSLNFFKTQEEDLPLTSSPCELFDGPGASQDHSVFQQNKKIMKRVKSEVWHH
FIVSPVDQLKALCRYCPCVISRGKRGDFGTSCLMRHLTRRHPDVLKNQKSTDEKESSPHP
YNNFAMMDTVSAKETESPVTEAKAQSTPAFSKKTSKLWNHFSISPADPTKVVCLHCNRTI
SRGKKTTNLGTSCLFRHMQRFHGHVLESNNAISGDAQDAEIHVKQEVMETSVYETEQNCE
RFDEEHPVAKKITKLVAEMLALDLQPSAVVENAGLNRLLEYLKPQYSLPSSSYFTSTAIP
DMYEKVKEVVLTHLKEAEGGVVHFTTSIWVSSQTREYLTLTAHWATYESSVRPQGQDFHC
SALLSVSQIDCDQDMHDIPKQLEYLWDTWITSSGLKRGFTLTDNITIQHTLEEHGHPIME
CFGHTIDLIVSEAIKSQRMVQNLLSIARKICERVHRSAKAKEKLVELQRVHQLPENQLVQ
DVPSKWRTSFFMLERLVEQKNAIDEMSIECNFREIISCDQWEVMLSVCNALKPFEVACRE
MSTHTATLGQVIPLIHILSRKIDLLFDETVGIDNMLKSLKEALVSRMSATLHDQRYTWAT
MLDPRYKTSLFTEEEAEQCKQDLIRELDSSSSTSAEAESLLPNGCSDDPASCSSSHSNAD
DLWSLMPDVRQRTKNEEKPKSSEEAVLEYLEEDILDQSCDPLDYWNLKKFLWPDLAKVAA
RYVGCPPSIVPSETLFSTASVNCALNQPRPMLDNIEGLLFLKVNLPLIYFQY
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggatggagaagaagaggttccccacatgagcgaggatctaatcattgagtccaatggc
ctcatcgagagtaagaaaagggaggcaaaagcgtcctgcctgaaaatcgaggggcaggac
ggctacgtcttcaagtcctacagcattcaccctcacgacgacgatgaagacccaaagtca
cttgcttgctcctcaacactggataaagacatactcccttgtttccattttacttctcag
atggacaaacgcttggagatagacctggcatgcaacacaggtccatcttcacccaacact
gataccgaaggaaatgcagagactgagaagtacgagaatggaaacgaatcgagtgagctt
gccagagaggacattgaggatgctaacgggatggaagatgaaccgcaggacgacgaaagg
ttggcgtttggcagctcgattggcccctttgcaacaaaagatgttgacgattatagtaat
ttactcagcggatacaccagcactctttatgatgttgccatggatgccgttacgcagagt
ctgttgtcatctataagaggtcacgccaacccgaggaaaaagtctccggcgtggaatcac
ttctgcatatcgccgcgagacaataccaaagcaatctgtttatactgcatgaaagagttt
agccgcggcaagaacgaaaaagacctcagcacaagctgcttaatgaggcacgtgcgaagg
gctcatcccactgtgcttttacaagacggagcggatgtatcgctcagtaacctgtctagc
tctcttccctctcctttcctacctttcccaccaagctcaccaaaaaacggagacttgacc
aattgcattttcactcctgcctcaaagaactcgtcgccgtccacgtcctcagcggagaat
tcagacccctcatccaaagaaacattacccaaagttgaaccaaaactagaatcatgcgcc
aatgctgacaccgtctatggctccctcctgccctcgcattccatcgaaaataacgttgaa
gaaatgtcagacggggggtctgagcgccttccggggaccccgaaaggctccaattcccgc
cgcaggtcagctgtatggaaacacttctacctgtcgcccgcggacaattccaaagctgtt
tgtattcattgcatgaatgagttcagcaggggtaaaaacggaaaggaccttgggacgagc
tgtctaatccgtcacatgtggagggcccacaaagaggttgtgatcgaggaaaacgggcag
ggcaatcatattcccccgccctatacaaatccgccctctctgttgtctcgcacacaattg
ctggactcgtttgaagtgaaaaaagaatcgcccctccttccatcctcgccagaaaccata
gctgacgagttaccccaaagcatcgaggaaagcatggatattaaggaggagtgtgaggag
gtgatgcaactctcagggcaggactcctccctgaacttctttaaaactcaagaggaagac
ttgcccctgacttcctcaccgtgcgagctcttcgacgggcccggcgcaagtcaggatcat
tcagtctttcagcagaacaaaaagatcatgaaacgggtgaaatcagaagtgtggcaccat
ttcatagtgtcgccggttgaccagttaaaagcactgtgccgttactgtccatgcgtcatc
agccggggaaagcggggcgactttgggacaagctgcttgatgaggcacctcacgcgccgc
caccctgacgttctcaaaaaccaaaaaagcacagatgaaaaagaatcatccccccacccc
tacaacaattttgccatgatggatacagtttccgccaaagaaactgagtcccccgtcaca
gaggcgaaggcgcaatccacgccagctttcagcaagaagacgtcaaagttgtggaaccat
ttctccatatcacctgccgaccctacaaaggtggtctgtttgcactgtaaccgcacaata
agcagaggcaaaaagactacaaacctcggtaccagctgtctcttccggcacatgcagagg
tttcacggacacgttcttgaaagtaacaatgctatctcaggtgacgcacaggatgcagaa
atccatgtcaaacaagaagtcatggagacctccgtttatgaaactgagcaaaactgtgag
aggttcgacgaggaacacccggttgccaaaaaaatcaccaaacttgtagcggaaatgctc
gcactggatctccagccatcagctgtggtagagaacgctggactgaacagactgctagag
tacctcaagcctcagtattctctaccatcatcatcttattttaccagcactgccatacca
gatatgtacgaaaaggtgaaggaagtcgtgcttacccatttgaaagaggctgaaggaggc
gttgtccacttcacaacaagtatttgggtcagtagccagactagggagtacttgaccctt
accgcccactgggcaacgtacgaatccagtgtcagaccccaagggcaagactttcactgt
tctgctctcctaagtgtctcacagatagactgcgaccaagatatgcacgacatcccgaag
cagctggagtatctgtgggatacttggatcacctcttcagggctgaaaagagggttcact
ctgacagataacatcaccatccagcacactttggaggagcacggccaccccatcatggag
tgtttcggacacactatcgacctcattgtaagtgaagccataaaaagccagagaatggtg
cagaaccttctaagtattgcacgaaagatctgcgaacgcgtgcaccgctcggcgaaagct
aaagagaagctggtggagttgcagagggtccaccagctgccagagaaccagctcgtccag
gacgtgccctccaagtggagaacgtccttcttcatgctggagcggctggtggagcagaag
aacgccatcgacgagatgtcgatcgagtgcaatttcagggaaataatcagctgtgaccag
tgggaagtgatgctgtcggtctgcaatgcactgaaacctttcgaagtcgcctgcagggag
atgagcacccacactgccacactgggtcaagtgataccactcatccacatcctcagcaga
aaaatagacttgctctttgacgagactgtgggcatagacaacatgctcaagtctctaaaa
gaggccttggtgagcagaatgtctgccacgctacacgaccagcgatacacctgggcgacc
atgctcgacccgagatacaaaacgtcactgttcacggaagaagaagccgagcagtgcaaa
caagatctgatccgggagctggactcgtcctcttctacctcagccgaagccgagtcgctg
ctgcccaacggctgcagcgatgacccggcctcgtgcagctcctcccactcgaacgcagac
gacctctggtccctaatgcccgacgtcaggcaaagaacgaaaaacgaggaaaagccaaag
tcctcagaagaggcggtgctggagtatctggaggaggacattctggatcaaagctgcgat
cctctcgactattggaacctgaagaagttcctgtggcccgatctcgccaaagtggccgcc
cgctacgtgggttgcccccctagcatcgtcccatcagagacgctgttcagcacggccagc
gtcaactgcgctctaaaccagcccaggccgatgctggacaacatcgaggggctgctgttc
ctgaaggtcaacctccctctgatttatttccagtactga
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